Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.6e-70 269.2 130 100.0
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.2e-65 253.1 130 95.4
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.2e-65 253.1 130 95.4
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.3e-59 230.7 119 95.8
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.8e-58 229.2 119 95.0
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.9e-55 219.2 131 85.5
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 5.2e-37 157.9 137 62.8
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 4.9e-35 151.4 137 61.3
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 2.7e-33 145.6 103 69.9
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.9e-31 139.4 138 58.7
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 5.6e-31 137.9 137 57.7
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 7.3e-31 137.5 135 56.3
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 9.5e-31 137.1 138 59.4
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.2e-30 136.7 138 56.5
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 3.6e-30 135.2 131 58.0
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.7e-30 134.8 136 54.4
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.8e-29 132.9 138 57.2
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 2.3e-29 132.5 101 67.3
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 4.0e-29 131.7 136 55.1
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.7e-27 126.3 135 53.3
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 2.2e-27 125.9 141 51.8
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 2.2e-27 125.9 141 51.8
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 4.9e-27 124.8 78 75.6
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 6.4e-27 124.4 141 51.1
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 8.3e-27 124.0 70 84.3
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 1.4e-26 123.2 118 56.8
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.4e-26 123.2 104 61.5
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.4e-26 123.2 68 85.3
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.9e-26 122.9 71 83.1
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.9e-26 122.9 101 64.4
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 3.2e-26 122.1 140 50.0
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 3.2e-26 122.1 135 52.6
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 7.1e-26 120.9 130 56.2
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 9.2e-26 120.6 70 82.9
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 9.2e-26 120.6 69 79.7
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.2e-25 120.2 135 49.6
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.1e-25 119.4 109 59.6
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.5e-25 118.6 140 52.9
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 3.5e-25 118.6 132 52.3
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 4.6e-25 118.2 70 80.0
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.0e-24 117.1 136 51.5
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 1.7e-24 116.3 135 48.9
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.7e-24 116.3 118 55.1
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 2.3e-24 115.9 69 78.3
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 2.3e-24 115.9 130 50.0
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 2.3e-24 115.9 123 54.5
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.0e-24 115.5 72 79.2
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 5.1e-24 114.8 85 68.2
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 6.6e-24 114.4 68 82.4
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 8.6e-24 114.0 133 50.4
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 8.6e-24 114.0 70 77.1
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 8.6e-24 114.0 130 52.3
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 1.1e-23 113.6 122 52.5
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.5e-23 113.2 105 61.0
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.9e-23 112.8 141 49.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 4.3e-23 111.7 135 49.6
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 5.6e-23 111.3 137 48.9
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.6e-23 111.3 65 80.0
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.2e-22 110.2 81 64.2
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.6e-22 109.8 85 67.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 3.6e-22 108.6 75 69.3
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 6.2e-22 107.8 102 56.9
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 8.1e-22 107.5 127 51.2
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 8.1e-22 107.5 135 50.4
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 1.1e-21 107.1 64 76.6
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 5.2e-21 104.8 67 76.1
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 5.2e-21 104.8 125 52.0
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 6.8e-21 104.4 72 73.6
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 8.9e-21 104.0 67 74.6
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 8.9e-21 104.0 64 75.0
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 2.0e-20 102.8 130 44.6
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 2.0e-20 102.8 125 49.6
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 3.4e-20 102.1 67 73.1
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 3.4e-20 102.1 67 73.1
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 4.4e-20 101.7 67 73.1
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 4.4e-20 101.7 67 73.1
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 5.8e-20 101.3 67 71.6
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 5.8e-20 101.3 65 73.8
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 9.9e-20 100.5 64 75.0
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 1.3e-19 100.1 67 73.1
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 2.9e-19 99.0 65 73.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 2.9e-19 99.0 67 70.1
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 3.8e-19 98.6 67 71.6
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.8e-19 98.6 69 66.7
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.4e-18 96.7 88 58.0
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.9e-18 96.3 69 65.2
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.9e-18 96.3 133 43.6
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 1.9e-18 96.3 83 60.2
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.9e-18 96.3 83 60.2
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.9e-18 96.3 83 60.2
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.4e-18 95.9 59 74.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 3.2e-18 95.5 67 67.2
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 3.2e-18 95.5 68 72.1
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 7.1e-18 94.4 69 60.9
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 1.2e-17 93.6 82 57.3
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.7e-17 92.4 79 62.0
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 6.0e-17 91.3 82 58.5
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 6.6e-16 87.8 55 78.2
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.9e-15 86.3 66 65.2
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.9e-15 86.3 66 65.2
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.9e-15 86.3 125 40.8
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 1.6e-14 83.2 86 54.7
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 2.8e-14 82.4 64 60.9
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 2.8e-14 82.4 78 55.1
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.5e-12 76.6 67 59.7
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 9.9e-12 73.9 66 51.5
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 8.4e-11 70.9 53 60.4
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 5.1e-08 61.6 36 83.3
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 5.1e-08 61.6 36 83.3


User provided reference genes

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