Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2174 Fragaria x ananassa HOM05D000961 ORTHO05D015275 2.6e-86 322.0 161 100.0
FAN11G3803 Fragaria x ananassa HOM05D000961 ORTHO05D015275 1.9e-12 76.6 39 89.7
FvH4_4g02130 Fragaria vesca HOM05D000961 ORTHO05D015275 4.2e-12 75.5 39 89.7
FvH4_4g19090 Fragaria vesca HOM05D000961 ORTHO05D015275 3.0e-10 69.3 37 89.2
FvH4_6g07470 Fragaria vesca HOM05D000961 ORTHO05D000841 5.2e-10 68.6 37 83.8
FAN14G0354 Fragaria x ananassa HOM05D000961 ORTHO05D000841 5.2e-10 68.6 37 83.8
RcHm_v2.0_Chr3g0457131 Rosa chinensis HOM05D000961 ORTHO05D000841 5.2e-10 68.6 37 83.8
FAN09G2576 Fragaria x ananassa HOM05D000961 ORTHO05D000841 1.1e-09 67.4 37 81.1
FAN11G1932 Fragaria x ananassa HOM05D000961 ORTHO05D015275 1.1e-09 67.4 36 88.9
FAN02G3224 Fragaria x ananassa HOM05D000961 ORTHO05D000841 1.5e-09 67.0 37 81.1
FAN05G2064 Fragaria x ananassa HOM05D000961 ORTHO05D000841 1.5e-09 67.0 37 81.1
Prupe.6G312700 Prunus persica HOM05D000961 ORTHO05D000841 2.6e-09 66.2 37 81.1
MD12G1205600 Malus domestica HOM05D000961 ORTHO05D000841 9.7e-09 64.3 37 75.7
FAN06G1468 Fragaria x ananassa HOM05D000961 ORTHO05D015275 6.3e-08 61.6 39 76.9
Gohir.A11G273600 Gossypium hirsutum HOM05D000961 ORTHO05D000841 6.3e-08 61.6 37 73.0
Gohir.D11G283700 Gossypium hirsutum HOM05D000961 ORTHO05D000841 6.3e-08 61.6 37 73.0
Gorai.007G306600 Gossypium raimondii HOM05D000961 ORTHO05D000841 6.3e-08 61.6 37 73.0
Dinv24447 Davidia involucrata HOM05D000961 ORTHO05D000841 8.2e-08 61.2 37 70.3
CAN.G1076.15 Capsicum annuum HOM05D000961 ORTHO05D000841 1.1e-07 60.8 37 70.3
Dinv30896 Davidia involucrata HOM05D000961 ORTHO05D000841 1.4e-07 60.5 37 70.3
Gohir.A13G112200 Gossypium hirsutum HOM05D000961 ORTHO05D000841 1.4e-07 60.5 37 73.0
MD04G1215200 Malus domestica HOM05D000961 ORTHO05D000841 1.4e-07 60.5 37 70.3
QL03p008646 Quercus lobata HOM05D000961 ORTHO05D000841 1.4e-07 60.5 37 70.3
QL03p013767 Quercus lobata HOM05D000961 ORTHO05D000841 1.4e-07 60.5 37 70.3
Solyc01g100530.3 Solanum lycopersicum HOM05D000961 ORTHO05D000841 1.4e-07 60.5 37 67.6
Sopen01g044040 Solanum pennellii HOM05D000961 ORTHO05D000841 1.4e-07 60.5 37 67.6
Gohir.D13G115201 Gossypium hirsutum HOM05D000961 ORTHO05D000841 1.8e-07 60.1 37 73.0
Gorai.013G129500 Gossypium raimondii HOM05D000961 ORTHO05D000841 1.8e-07 60.1 37 73.0
Manes.09G177000 Manihot esculenta HOM05D000961 ORTHO05D000841 2.4e-07 59.7 37 70.3
Duzib128G0898 Durio zibethinus HOM05D000961 ORTHO05D000841 3.1e-07 59.3 37 67.6
Potri.013G008500 Populus trichocarpa HOM05D000961 ORTHO05D000841 4.1e-07 58.9 37 73.0
Rhsim05G0127100 Rhododendron simsii HOM05D000961 ORTHO05D000841 4.1e-07 58.9 37 70.3
Thecc.05G323300 Theobroma cacao HOM05D000961 ORTHO05D000841 4.1e-07 58.9 37 70.3
arahy.Tifrunner.gnm1.ann1.48N9T6 Arachis hypogaea HOM05D000961 ORTHO05D000841 5.3e-07 58.5 37 67.6
arahy.Tifrunner.gnm1.ann1.N1S3JP Arachis hypogaea HOM05D000961 ORTHO05D000841 5.3e-07 58.5 37 67.6
Ciclev10000144m.g Citrus clementina HOM05D000961 ORTHO05D000841 5.3e-07 58.5 37 67.6
GSVIVG01031243001 Vitis vinifera HOM05D000961 ORTHO05D000841 5.3e-07 58.5 37 70.3
Haze_04059 Corylus avellana HOM05D000961 ORTHO05D000841 7.0e-07 58.2 37 70.3
Eucgr.H03293 Eucalyptus grandis HOM05D000961 ORTHO05D000841 7.0e-07 58.2 37 67.6
Nitab4.5_0000368g0030 Nicotiana tabacum HOM05D000961 ORTHO05D000841 9.1e-07 57.8 55 49.1
Nitab4.5_0002033g0010 Nicotiana tabacum HOM05D000961 ORTHO05D000841 9.1e-07 57.8 55 49.1
Glyma.06G236651 Glycine max HOM05D000961 ORTHO05D000841 1.2e-06 57.4 37 62.2
Glyma.20G097001 Glycine max HOM05D000961 ORTHO05D000841 1.2e-06 57.4 37 62.2
TAR633G1496 Trochodendron aralioides HOM05D000961 ORTHO05D000841 1.2e-06 57.4 37 70.3
CSS0030700 Camellia sinensis var. sinensis HOM05D000961 ORTHO05D015275 1.6e-06 57.0 37 62.2
Glyma.10G146900 Glycine max HOM05D000961 ORTHO05D000841 1.6e-06 57.0 37 62.2
Lj5C332T3 Lonicera japonica HOM05D000961 ORTHO05D000841 1.6e-06 57.0 37 67.6
TWI12G1045 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 2.0e-06 56.6 37 64.9
vmacro19758 Vaccinium macrocarpon HOM05D000961 ORTHO05D000841 2.0e-06 56.6 36 69.4
Ca_10174_v3 Cicer arietinum L. HOM05D000961 ORTHO05D000841 5.9e-06 55.1 37 62.2
TPR.G7698 Trifolium pratense HOM05D000961 ORTHO05D000841 5.9e-06 55.1 37 62.2
arahy.Tifrunner.gnm1.ann1.7PJZ44 Arachis hypogaea HOM05D000961 ORTHO05D015275 7.7e-06 54.7 31 74.2
Cc02_g35060 Coffea canephora HOM05D000961 ORTHO05D000841 7.7e-06 54.7 37 62.2
Medtr1g084090 Medicago truncatula HOM05D000961 ORTHO05D000841 7.7e-06 54.7 37 59.5


User provided reference genes

Program Settings