Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2038 Fragaria x ananassa HOM05D006200 ORTHO05D007569 6.2e-67 257.3 127 100.0
FAN05G3226 Fragaria x ananassa HOM05D006200 ORTHO05D007569 1.8e-66 255.8 127 99.2
FAN14G5749 Fragaria x ananassa HOM05D006200 ORTHO05D007569 5.2e-66 254.2 127 98.4
FvH4_6g40890 Fragaria vesca HOM05D006200 ORTHO05D007569 8.4e-56 220.3 127 88.2
FAN02G1931 Fragaria x ananassa HOM05D006200 ORTHO05D007569 2.4e-55 218.8 127 87.4
RcHm_v2.0_Chr2g0156461 Rosa chinensis HOM05D006200 ORTHO05D007569 3.9e-53 211.5 127 84.3
Haze_12649 Corylus avellana HOM05D006200 ORTHO05D007569 6.9e-50 200.7 127 78.7
MD09G1123700 Malus domestica HOM05D006200 ORTHO05D007569 9.0e-50 200.3 127 78.7
ClCG02G002790 Citrullus lanatus HOM05D006200 ORTHO05D007569 3.4e-49 198.4 127 77.2
Prupe.3G200400 Prunus persica HOM05D006200 ORTHO05D007569 7.6e-49 197.2 127 75.6
MELO3C024201.2 Cucumis melo HOM05D006200 ORTHO05D007569 1.3e-48 196.4 127 77.2
MD17G1114500 Malus domestica HOM05D006200 ORTHO05D007569 2.9e-48 195.3 127 77.2
QL08p028355 Quercus lobata HOM05D006200 ORTHO05D007569 3.8e-48 194.9 126 75.4
Ciclev10017136m.g Citrus clementina HOM05D006200 ORTHO05D007569 6.4e-48 194.1 127 74.8
Cfa014235 Carpinus fangiana HOM05D000160 ORTHO05D000496 8.4e-48 193.7 127 76.4
Hma1.2p1_2053F.1_g312740 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 1.1e-47 193.4 127 74.0
Lalb_Chr04g0250001 Lupinus albus HOM05D006200 ORTHO05D007569 1.4e-47 193.0 127 74.8
Aqoxy4G02230 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 1.9e-47 192.6 127 74.8
arahy.Tifrunner.gnm1.ann1.GBED9Y Arachis hypogaea HOM05D006200 ORTHO05D007569 1.9e-47 192.6 127 75.6
PSO675G7132 Papaver somniferum HOM05D006200 ORTHO05D007569 1.9e-47 192.6 127 74.0
Potri.014G164500 Populus trichocarpa HOM05D006200 ORTHO05D007569 1.9e-47 192.6 127 74.8
Sed0007295 Sechium edule HOM05D006200 ORTHO05D007569 1.9e-47 192.6 127 75.6
SGA_v2.0_scaffold181G39681 Striga asiatica HOM05D006200 ORTHO05D007569 1.9e-47 192.6 127 74.0
Actinidia09782 Actinidia chinensis HOM05D006200 ORTHO05D007569 3.2e-47 191.8 127 74.8
Nn1g07469 Nelumbo nucifera HOM05D006200 ORTHO05D007569 4.2e-47 191.4 127 74.8
PGSC0003DMG400006126 Solanum tuberosum HOM05D006200 ORTHO05D007569 4.2e-47 191.4 127 73.2
Rhsim04G0037800 Rhododendron simsii HOM05D006200 ORTHO05D007569 5.4e-47 191.0 127 74.0
Psat2g026360 Pisum sativum HOM05D006200 ORTHO05D007569 7.1e-47 190.7 127 73.2
Medtr5g085420 Medicago truncatula HOM05D006200 ORTHO05D007569 9.3e-47 190.3 127 71.7
Peaxi162Scf00776g00024 Petunia axillaris HOM05D006200 ORTHO05D007569 9.3e-47 190.3 127 74.8
Aa31sc107G30 Aethionema arabicum HOM05D006200 ORTHO05D007569 1.2e-46 189.9 141 70.2
CSS0021565 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 1.2e-46 189.9 127 73.2
Lsat_1_v5_gn_5_121761 Lactuca sativa HOM05D006200 ORTHO05D007569 1.2e-46 189.9 127 73.2
Manes.13G063700 Manihot esculenta HOM05D006200 ORTHO05D007569 1.2e-46 189.9 127 74.8
Sabra14G0125300 Salix brachista HOM05D006200 ORTHO05D007569 1.6e-46 189.5 139 69.1
Atru.chr6.3355 Acer truncatum HOM05D006200 ORTHO05D007569 2.1e-46 189.1 127 73.2
Hma1.2p1_0545F.1_g176060 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 2.1e-46 189.1 127 74.0
LjContig00029g0002447 Lotus japonicus HOM05D006200 ORTHO05D007569 2.7e-46 188.7 127 73.2
HPP92_012226 Vanilla planifolia HOM05D006200 ORTHO05D007569 2.7e-46 188.7 127 73.2
PSO541G4622 Papaver somniferum HOM05D006200 ORTHO05D007569 3.5e-46 188.3 127 72.4
ATR0624G019 Amborella trichopoda HOM05D006200 ORTHO05D007569 4.6e-46 188.0 127 73.2
CAN.G1036.6 Capsicum annuum HOM05D006200 ORTHO05D007569 4.6e-46 188.0 127 72.4
Sopen07g024150 Solanum pennellii HOM05D006200 ORTHO05D007569 4.6e-46 188.0 127 72.4
CiPaw.04G196600 Carya illinoinensis HOM05D006200 ORTHO05D007569 6.0e-46 187.6 127 73.2
Nitab4.5_0001774g0080 Nicotiana tabacum HOM05D006200 ORTHO05D007569 6.0e-46 187.6 127 72.4
Sed0012997 Sechium edule HOM05D006200 ORTHO05D007569 6.0e-46 187.6 125 75.2
Solyc07g047700.4 Solanum lycopersicum HOM05D006200 ORTHO05D007569 6.0e-46 187.6 127 71.7
TAR626G0047 Trochodendron aralioides HOM05D006200 ORTHO05D007569 6.0e-46 187.6 127 70.9
Dinv05360 Davidia involucrata HOM05D006200 ORTHO05D007569 7.8e-46 187.2 127 73.2
Rhsim02G0017500 Rhododendron simsii HOM05D006200 ORTHO05D007569 1.3e-45 186.4 127 71.7
HanXRQChr10g0306841 Helianthus annuus HOM05D006200 ORTHO05D007569 1.7e-45 186.0 127 71.7
TWI36G1668 Tripterygium wilfordii HOM05D006200 ORTHO05D007569 1.7e-45 186.0 127 71.7
MSTRG.14921 Avicennia marina HOM05D006200 ORTHO05D007569 3.0e-45 185.3 127 70.9
Cc05_g02100 Coffea canephora HOM05D006200 ORTHO05D007569 5.1e-45 184.5 127 74.0
Glyma.14G048700 Glycine max HOM05D006200 ORTHO05D007569 5.1e-45 184.5 127 70.1
SalBow7G0450 Salvia bowleyana HOM05D006200 ORTHO05D007569 5.1e-45 184.5 127 70.9
CARHR102920 Cardamine hirsuta HOM05D006200 ORTHO05D007569 6.6e-45 184.1 127 72.4
THA.LOC104815354 Tarenaya hassleriana HOM05D006200 ORTHO05D007569 6.6e-45 184.1 127 73.2
Glyma.02G268700 Glycine max HOM05D006200 ORTHO05D007569 8.7e-45 183.7 127 70.1
CDE07G1212 Ceratophyllum demersum HOM05D006200 ORTHO05D007569 1.1e-44 183.3 127 70.9
Carub.0003s2650 Capsella rubella HOM05D006200 ORTHO05D007569 1.5e-44 183.0 127 70.9
Migut.M00041 Erythranthe guttata HOM05D006200 ORTHO05D007569 1.5e-44 183.0 127 71.7
Oeu040457.1 Olea europaea HOM05D006200 ORTHO05D007569 3.3e-44 181.8 127 70.1
TPR.G25628 Trifolium pratense HOM05D006200 ORTHO05D007569 7.3e-44 180.6 127 68.5
A07p06630 Brassica napus HOM05D006200 ORTHO05D007569 9.6e-44 180.3 127 70.9
CANSAT64G0383 Cannabis sativa HOM05D006200 ORTHO05D007569 9.6e-44 180.3 127 68.5
C07p10040 Brassica napus HOM05D006200 ORTHO05D007569 1.3e-43 179.9 127 70.9
BraA07t28456Z Brassica rapa HOM05D006200 ORTHO05D007569 1.3e-43 179.9 127 70.9
Cc02_g04700 Coffea canephora HOM05D006200 ORTHO05D007569 1.3e-43 179.9 127 70.9
Thhalv10002727m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.3e-43 179.9 127 70.9
AL3G42530 Arabidopsis lyrata HOM05D006200 ORTHO05D007569 1.6e-43 179.5 127 70.1
AT2G04900 Arabidopsis thaliana HOM05D006200 ORTHO05D007569 1.6e-43 179.5 127 70.1
BcaB06g26789 Brassica carinata HOM05D006200 ORTHO05D007569 1.6e-43 179.5 127 70.9
Sp3g23500 Schrenkiella parvula HOM05D006200 ORTHO05D007569 2.1e-43 179.1 127 70.1
BcaC06g35887 Brassica carinata HOM05D006200 ORTHO05D007569 3.6e-43 178.3 127 70.1
BolC7t41451H Brassica oleracea HOM05D006200 ORTHO05D007569 3.6e-43 178.3 127 70.1
Os03g0751000 Oryza sativa ssp. japonica HOM05D006200 ORTHO05D007569 6.2e-43 177.6 126 69.0
Manes.12G061800 Manihot esculenta HOM05D006200 ORTHO05D007569 4.0e-42 174.9 123 73.2
Cpa.g.sc136.18 Carica papaya HOM05D006200 ORTHO05D007569 5.3e-42 174.5 127 66.9
Zm00001eb057520 Zea mays HOM05D006200 ORTHO05D007569 5.3e-42 174.5 126 68.3
vmacro09406 Vaccinium macrocarpon HOM05D006200 ORTHO05D007569 1.2e-41 173.3 160 58.1
Thecc.01G190500 Theobroma cacao HOM05D006200 ORTHO05D007569 2.0e-41 172.6 122 69.7
Gohir.A07G167000 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.6e-41 172.2 127 66.9
Gohir.D07G172300 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.6e-41 172.2 127 66.9
Gorai.001G192600 Gossypium raimondii HOM05D006200 ORTHO05D007569 2.6e-41 172.2 127 66.9
GSVIVG01030518001 Vitis vinifera HOM05D006200 ORTHO05D007569 3.4e-41 171.8 122 68.9
GSVIVG01030523001 Vitis vinifera HOM05D006200 ORTHO05D007569 3.4e-41 171.8 122 68.9
CSS0018696 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 2.9e-40 168.7 115 73.0
Duzib138G0810 Durio zibethinus HOM05D006200 ORTHO05D007569 4.9e-40 167.9 127 63.8
SEGI_07661 Sequoiadendron giganteum HOM05D006200 ORTHO05D007569 3.2e-39 165.2 127 65.4
Lj8A134G80 Lonicera japonica HOM05D006200 ORTHO05D007569 9.3e-39 163.7 113 72.6
Zm00001eb181090 Zea mays HOM05D006200 ORTHO05D007569 3.5e-38 161.8 125 65.6
ECA234G3013 Erigeron canadensis HOM05D006200 ORTHO05D007569 6.7e-37 157.5 113 69.9
Zm00001eb025380 Zea mays HOM05D006200 ORTHO05D007569 1.9e-36 156.0 134 61.2
Eucgr.A01040 Eucalyptus grandis HOM05D006200 ORTHO05D007569 3.3e-36 155.2 113 69.0
AUR62029092 Chenopodium quinoa HOM05D006200 ORTHO05D007569 1.3e-35 153.3 111 66.7
MBI16_g28733_MAGBIO Magnolia biondii HOM05D006200 ORTHO05D007569 1.8e-34 149.4 114 66.7
COL.COLO4_33018 Corchorus olitorius HOM05D006200 ORTHO05D007569 3.1e-34 148.7 170 49.4
Mapoly0007s0279 Marchantia polymorpha HOM05D006200 ORTHO05D007569 5.3e-34 147.9 126 60.3
arahy.Tifrunner.gnm1.ann1.HJ95Y2 Arachis hypogaea HOM05D006200 ORTHO05D007569 3.5e-30 135.2 94 72.3
Phvul.008G213600 Phaseolus vulgaris HOM05D006200 ORTHO05D007569 4.6e-30 134.8 94 70.2
Zm00001eb402120 Zea mays HOM05D006200 ORTHO05D007569 7.9e-30 134.0 124 56.5
SMO356G0472 Selaginella moellendorffii HOM05D006200 ORTHO05D007569 1.0e-29 133.7 102 62.7
Pp3c6_18900 Physcomitrium patens HOM05D006200 ORTHO05D007569 1.3e-29 133.3 113 60.2
Pp3c6_18880 Physcomitrium patens HOM05D006200 ORTHO05D007569 5.1e-29 131.3 123 52.0
CsaV3_7G002590 Cucumis sativus L. HOM05D006200 ORTHO05D007569 2.5e-28 129.0 90 75.6
DCAR_021101 Daucus carota HOM05D006200 ORTHO05D007569 1.6e-27 126.3 94 67.0
Cre12.g543050 Chlamydomonas reinhardtii HOM05D006200 ORTHO05D007569 2.4e-26 122.5 123 48.8
MSTRG.6639 Avicennia marina HOM05D006200 ORTHO05D007569 2.6e-25 119.0 90 68.9
AUR62015021 Chenopodium quinoa HOM05D006200 ORTHO05D007569 3.8e-24 115.2 71 70.4
PGR042G1757 Punica granatum HOM05D006200 ORTHO05D007569 1.1e-23 113.6 66 75.8
Thhalv10023849m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.9e-23 112.8 67 76.1
Thhalv10009367m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 2.5e-23 112.5 64 79.7
Thhalv10016039m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 4.2e-23 111.7 64 78.1
Zm00001eb093000 Zea mays HOM05D006200 ORTHO05D007569 7.1e-23 110.9 124 49.2
SHI10134 Sapria himalayana HOM05D006200 ORTHO05D007569 1.6e-22 109.8 93 58.1
Thhalv10027363m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 6.0e-22 107.8 64 76.6
AagrBONN_evm.TU.Sc2ySwM_368.977 Anthoceros agrestis HOM05D006200 ORTHO05D007569 7.9e-22 107.5 65 70.8
Ah.01g013830 Amaranthus hybridus HOM05D004982 ORTHO05D007569 3.3e-20 102.1 78 62.8
MD17G1249100 Malus domestica HOM05D006200 ORTHO05D007569 1.3e-19 100.1 51 90.2
Zm00001eb414470 Zea mays HOM05D006200 ORTHO05D007569 1.3e-19 100.1 84 61.9
Pp3c16_4930 Physcomitrium patens HOM05D006200 ORTHO05D007569 4.1e-18 95.1 123 44.7
Pp3c16_5110 Physcomitrium patens HOM05D006200 ORTHO05D007569 4.1e-18 95.1 123 44.7
Hund21568 Selenicereus undatus HOM05D006200 ORTHO05D007569 9.4e-15 84.0 170 36.5
Aqoxy5G00520 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 3.3e-12 75.5 40 82.5
Zm00001eb125940 Zea mays HOM05D000001 ORTHO05D007569 4.3e-12 75.1 45 77.8
RcHm_v2.0_Chr5g0026981 Rosa chinensis HOM05D006200 ORTHO05D007569 1.8e-10 69.7 37 81.1
C03p34670 Brassica napus HOM05D006200 ORTHO05D007569 7.7e-09 64.3 51 66.7
BolC3t15778H Brassica oleracea HOM05D006200 ORTHO05D007569 7.7e-09 64.3 51 66.7


User provided reference genes

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