Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-304 1049.3 556 100.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.2e-293 1011.1 556 97.1
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-290 1002.7 556 96.4
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 4.0e-288 994.2 556 95.3
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-284 982.6 571 92.6
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-280 968.4 556 93.9
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.2e-276 956.1 560 91.4
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.0e-259 899.8 557 85.3
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.9e-230 802.0 571 75.7
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.8e-227 792.7 570 75.1
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 4.0e-227 791.6 571 74.8
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 8.9e-227 790.4 566 75.4
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.6e-226 788.9 571 74.3
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 3.4e-226 788.5 558 76.3
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.7e-225 786.2 566 74.9
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.9e-225 785.4 555 77.3
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 4.9e-225 784.6 571 74.6
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 4.6e-223 778.1 560 74.3
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 4.6e-223 778.1 567 74.4
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 5.9e-223 777.7 565 74.2
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 7.8e-223 777.3 553 76.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.3e-222 776.5 566 74.2
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.3e-222 775.8 571 73.7
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 3.0e-222 775.4 566 74.6
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.0e-222 775.4 563 73.5
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 3.9e-222 775.0 562 75.1
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.5e-221 773.1 566 73.0
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 2.5e-221 772.3 571 73.6
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 9.5e-221 770.4 568 74.1
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 8.0e-220 767.3 572 73.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.4e-219 766.5 562 72.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.3e-219 765.8 563 73.4
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.2e-218 763.5 576 71.9
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.0e-218 762.7 560 73.0
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 9.8e-218 760.4 559 72.6
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.3e-217 760.0 568 72.5
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 6.4e-217 757.7 565 71.3
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 4.1e-216 755.0 559 72.8
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 4.1e-216 755.0 560 71.4
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 2.0e-215 752.7 573 72.1
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.3e-214 750.0 572 72.2
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.2e-212 743.4 565 71.7
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.3e-211 739.2 564 70.6
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.3e-211 739.2 565 71.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 8.9e-211 737.3 562 71.0
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 8.9e-211 737.3 595 68.9
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 9.8e-210 733.8 634 64.5
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 2.4e-208 729.2 569 70.1
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 5.4e-208 728.0 567 71.6
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 5.4e-208 728.0 563 69.6
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 5.4e-208 728.0 564 70.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 4.6e-207 724.9 568 68.3
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.0e-206 723.8 564 71.5
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 2.3e-206 722.6 569 68.7
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 9.5e-205 717.2 565 68.7
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.2e-204 716.8 563 69.3
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 2.1e-204 716.1 568 68.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.0e-202 709.5 586 65.7
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 9.9e-202 707.2 563 67.9
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 4.9e-201 704.9 571 68.8
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.9e-200 703.0 557 67.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.9e-200 703.0 568 68.5
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.1e-199 699.5 558 67.0
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 3.5e-199 698.7 558 66.7
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 1.7e-198 696.4 557 66.8
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 3.0e-198 695.7 557 66.8
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.5e-197 693.3 557 66.4
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.5e-197 693.3 553 68.4
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 7.3e-197 691.0 558 66.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.2e-196 690.3 560 66.6
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.1e-196 689.5 560 67.9
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 8.9e-195 684.1 557 66.1
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 8.9e-195 684.1 558 67.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.6e-194 682.6 565 65.1
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 2.6e-194 682.6 560 64.8
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 3.4e-194 682.2 568 66.9
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.1e-192 677.2 570 64.9
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 8.4e-185 651.0 559 65.8
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 2.4e-184 649.4 529 69.0
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.1e-183 646.4 557 63.2
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.1e-183 646.4 557 63.2
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.7e-183 646.0 557 63.4
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.7e-183 646.0 557 63.4
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.6e-183 645.2 563 64.1
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 7.9e-183 644.4 557 63.2
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.5e-178 630.2 568 61.3
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.5e-178 628.6 524 64.7
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 7.1e-176 621.3 564 61.3
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 3.9e-174 615.5 503 66.8
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 5.6e-173 611.7 561 59.9
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.3e-172 610.5 571 58.7
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.7e-169 600.1 576 57.6
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 5.5e-168 595.1 481 66.9
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 6.0e-167 591.7 632 54.9
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.4e-160 570.5 511 62.8
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 6.5e-145 518.5 402 68.7
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 5.7e-125 452.2 447 60.2
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.9e-120 437.2 402 63.7
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 2.8e-119 433.3 571 43.4
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.8e-115 420.6 553 44.7
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 3.3e-112 409.8 224 90.2
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.5e-101 374.4 249 82.7
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.0e-101 374.0 585 39.8
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.0e-99 365.5 237 79.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 4.6e-98 362.8 301 69.1
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.5e-93 347.8 590 37.8
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.9e-91 340.9 297 64.6
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 5.4e-91 339.3 553 39.4
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 9.9e-69 265.4 196 69.4
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.1e-66 257.7 174 69.5
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.4e-62 244.2 364 47.5
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 1.6e-55 221.5 151 76.8
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.3e-52 211.8 577 32.4
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.8e-49 201.4 582 28.0
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 4.8e-47 193.4 157 73.9
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-35 154.5 71 100.0
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 2.1e-34 151.4 148 57.4
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 4.8e-15 87.0 54 85.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 6.1e-10 70.1 52 63.5
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.7e-07 62.0 64 54.7
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 6.3e-07 60.1 41 80.5


User provided reference genes

Program Settings