Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.6e-186 654.4 334 100.0
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 5.4e-179 630.9 336 95.8
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.0e-178 627.5 336 95.2
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.1e-177 624.4 336 96.1
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.9e-176 622.5 335 95.2
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 3.1e-158 562.0 342 87.7
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.4e-142 510.0 346 81.8
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 2.6e-141 505.8 339 77.9
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 2.9e-140 502.3 341 76.5
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 6.7e-137 491.1 339 73.7
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 6.7e-137 491.1 339 74.0
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.8e-134 483.0 252 95.2
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 2.0e-133 479.6 335 75.2
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 2.5e-131 472.6 338 72.8
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 4.2e-131 471.9 336 72.9
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 4.2e-131 471.9 332 71.4
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 6.7e-129 464.5 341 71.0
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 8.7e-129 464.2 333 71.5
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.9e-128 463.0 333 71.2
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 4.3e-128 461.8 349 70.8
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.6e-127 459.9 337 71.8
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.2e-127 459.5 337 71.2
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 2.4e-126 456.1 275 80.7
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.3e-126 454.9 336 70.8
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 9.0e-126 454.1 335 70.7
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.6e-125 452.6 335 71.0
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 5.9e-125 451.4 336 69.0
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.7e-124 449.9 344 68.9
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 1.7e-124 449.9 335 68.7
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.7e-124 449.9 297 76.8
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 2.2e-124 449.5 324 70.4
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 2.2e-124 449.5 336 69.9
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.9e-124 449.1 335 69.6
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.9e-124 449.1 338 69.5
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 3.8e-124 448.7 325 72.0
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 3.8e-124 448.7 337 69.1
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 6.5e-124 448.0 337 69.1
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 8.5e-124 447.6 346 69.9
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 8.5e-124 447.6 316 72.8
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.4e-123 446.8 331 68.6
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.9e-123 446.4 333 68.2
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 3.2e-123 445.7 352 70.2
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 4.2e-123 445.3 342 68.1
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 7.2e-123 444.5 341 67.4
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 9.4e-123 444.1 342 67.8
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.6e-122 443.4 333 69.4
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.6e-122 443.4 310 72.3
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 2.1e-122 443.0 319 70.8
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 2.7e-122 442.6 337 68.2
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 3.6e-122 442.2 324 69.8
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.8e-121 439.9 335 68.4
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.8e-121 439.9 318 70.8
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 2.3e-121 439.5 340 68.2
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 3.0e-121 439.1 333 69.1
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 3.9e-121 438.7 333 68.8
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 8.8e-121 437.6 335 67.5
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.1e-120 437.2 331 68.0
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.5e-120 436.8 336 67.6
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.0e-120 436.4 338 67.2
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.5e-120 436.0 335 69.3
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.3e-120 435.6 337 68.0
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.3e-120 435.3 250 82.0
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.7e-119 433.3 337 65.3
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.7e-119 432.2 337 67.1
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 4.8e-119 431.8 333 66.7
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 8.2e-119 431.0 250 81.2
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.1e-118 430.6 331 68.0
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 1.1e-118 430.6 332 67.8
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.4e-118 430.3 329 68.4
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 3.1e-118 429.1 321 69.2
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 4.1e-118 428.7 326 67.2
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 5.3e-118 428.3 331 68.3
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 6.9e-118 427.9 337 67.4
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 9.1e-118 427.6 333 67.9
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 3.4e-117 425.6 252 80.6
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 2.2e-116 422.9 250 80.8
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.9e-116 422.5 385 59.0
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 5.0e-116 421.8 341 65.7
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.4e-115 420.2 323 67.5
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 5.5e-115 418.3 331 65.3
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 5.5e-115 418.3 339 66.1
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.2e-114 417.2 310 67.4
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.2e-114 417.2 310 67.4
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 1.2e-114 417.2 335 65.4
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 1.6e-114 416.8 333 64.6
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.6e-114 416.8 310 67.1
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.6e-114 416.8 310 67.1
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.4e-113 413.7 334 64.7
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 1.4e-113 413.7 335 66.0
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 1.8e-113 413.3 255 76.5
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 1.8e-113 413.3 337 64.1
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.8e-113 413.3 310 69.0
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 3.0e-113 412.5 334 66.2
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 7.4e-112 407.9 411 55.5
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 2.4e-110 402.9 333 62.8
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 4.1e-110 402.1 338 63.6
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 4.1e-110 402.1 256 75.0
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 2.0e-109 399.8 303 69.3
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 4.5e-109 398.7 331 62.2
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 7.7e-109 397.9 256 74.6
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 4.2e-107 392.1 324 62.3
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.6e-106 390.2 331 61.0
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 2.7e-106 389.4 301 67.1
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 4.7e-106 388.7 319 63.0
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.4e-102 377.1 251 70.5
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 5.9e-101 371.7 299 64.9
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 3.6e-98 362.5 272 64.7
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 1.7e-95 353.6 338 56.5
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 4.0e-89 332.4 279 58.4
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 1.7e-87 327.0 332 56.3
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 3.5e-85 319.3 244 67.2
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 1.3e-79 300.8 335 53.4
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 2.0e-77 293.5 258 60.9
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 4.4e-64 249.2 217 61.3
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.7e-61 240.0 208 64.4
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 3.5e-61 239.6 272 47.1
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 6.6e-60 235.3 207 63.8
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.9e-59 233.8 238 48.3
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 3.3e-59 233.0 150 74.0
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 3.3e-59 233.0 273 44.3
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.5e-56 224.2 207 58.9
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 4.4e-56 222.6 260 44.6
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 9.9e-56 221.5 209 61.7
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.4e-55 218.8 127 83.5
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.4e-55 218.8 127 83.5
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 1.1e-51 208.0 220 47.7
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 3.3e-51 206.5 126 79.4
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 2.4e-49 200.3 170 62.4
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 3.4e-48 196.4 109 82.6
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 3.8e-47 193.0 255 40.4
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 9.0e-41 171.8 248 38.7
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 1.1e-35 154.8 100 73.0
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 7.4e-35 152.1 91 81.3
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 4.2e-30 136.3 126 62.7
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 4.6e-29 132.9 215 34.4
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.1e-27 128.3 110 69.1
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 3.7e-26 123.2 65 87.7
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 8.1e-26 122.1 104 62.5
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-25 121.3 65 86.2
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 3.1e-25 120.2 65 86.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 7.1e-22 109.0 107 57.9
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 7.1e-22 109.0 107 57.9
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 7.1e-22 109.0 107 57.9
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.3e-20 104.8 72 66.7
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 4.1e-17 93.2 154 36.4
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 1.5e-16 91.3 50 82.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 1.5e-16 91.3 52 80.8
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.0e-15 88.6 86 65.1
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 1.3e-15 88.2 47 83.0
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 4.2e-14 83.2 47 80.9
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 5.7e-11 72.8 160 34.4
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 9.7e-11 72.0 46 71.7
MD17G1019500 Malus domestica HOM05D004896 ORTHO05D246134 1.3e-07 61.6 80 56.2


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