Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1373 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.7e-154 547.7 259 100.0
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-143 511.5 269 92.2
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-116 423.3 225 91.1
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 1.2e-85 320.5 269 65.1
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.7e-42 177.2 258 45.0
FAN10G2747 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.7e-42 177.2 256 43.4
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 1.6e-37 160.6 231 41.1
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 8.0e-37 158.3 246 42.3
FAN01G2610 Fragaria x ananassa HOM05D001225 ORTHO05D001252 3.9e-36 156.0 265 38.1
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 8.8e-36 154.8 245 40.0
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.4e-35 151.8 238 41.2
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 8.2e-34 148.3 259 39.4
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.2e-34 148.3 238 41.2
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.2e-34 148.3 236 40.7
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-33 147.5 236 40.7
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 3.1e-33 146.4 238 40.8
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.1e-33 146.0 244 39.3
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 9.1e-33 144.8 231 39.0
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 1.6e-32 144.1 241 37.3
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 5.9e-32 142.1 244 38.1
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 5.0e-31 139.0 227 41.9
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 8.5e-31 138.3 234 37.2
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 1.1e-30 137.9 229 37.6
RcHm_v2.0_Chr5g0016491 Rosa chinensis HOM05D003981 ORTHO05D003666 5.5e-30 135.6 240 38.3
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 7.2e-30 135.2 243 37.0
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 6.1e-29 132.1 250 34.8
RcHm_v2.0_Chr2g0085201 Rosa chinensis HOM05D003981 ORTHO05D003666 2.3e-28 130.2 190 41.1
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 3.0e-28 129.8 242 37.6
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 4.0e-28 129.4 237 35.4
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 5.2e-28 129.0 236 37.7
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-28 129.0 236 37.7
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 5.2e-28 129.0 238 35.3
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 1.2e-27 127.9 232 36.2
FAN08G1984 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.4e-27 125.9 238 36.6
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-26 124.0 237 36.7
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-26 123.2 242 36.8
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 8.3e-26 121.7 213 39.4
FvH4_6g03511 Fragaria vesca HOM05D003981 ORTHO05D003666 3.1e-25 119.8 155 44.5
FAN15G2324 Fragaria x ananassa HOM05D002345 ORTHO05D002391 7.0e-25 118.6 235 35.7
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-24 117.9 250 35.2
FAN20G0367 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-24 117.5 261 36.8
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 3.5e-24 116.3 247 35.6
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 4.5e-24 115.9 239 36.0
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 4.5e-24 115.9 238 35.7
FvH4_3g01041 Fragaria vesca HOM05D003981 ORTHO05D003666 5.9e-24 115.5 200 33.5
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 1.0e-23 114.8 237 35.9
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-23 114.4 239 36.0
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-23 114.4 246 32.5
FAN17G3075 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-23 114.0 250 36.4
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.7e-23 114.0 167 39.5
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 3.8e-23 112.8 241 36.1
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.8e-23 112.8 241 36.1
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.8e-23 112.8 238 35.7
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-23 112.5 201 37.8
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 6.5e-23 112.1 148 43.2
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.5e-23 112.1 194 39.7
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 6.5e-23 112.1 248 33.9
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.1e-22 111.3 194 36.6
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-22 110.9 205 36.6
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-22 110.5 242 35.5
FAN05G2982 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-22 110.2 272 35.3
FvH4_2g20921 Fragaria vesca HOM05D003981 ORTHO05D003666 3.2e-22 109.8 266 33.8
FAN15G1118 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-22 109.8 243 33.7
FAN09G1093 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.2e-22 109.4 203 35.0
FvH4_4g22410 Fragaria vesca HOM05D003981 ORTHO05D003666 1.2e-21 107.8 142 43.7
FAN26G0221 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-21 107.5 165 35.2
MD12G1195000 Malus domestica HOM05D003981 ORTHO05D003666 1.6e-21 107.5 246 32.5
FAN05G1423 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.7e-21 106.7 204 35.3
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.7e-21 106.7 243 33.7
Prupe.3G238400 Prunus persica HOM05D003981 ORTHO05D003666 6.1e-21 105.5 282 30.5
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 1.0e-20 104.8 235 35.3
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-20 103.6 241 33.2
FAN18G2469 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-20 102.4 240 32.1
Prupe.8G061400 Prunus persica HOM05D003981 ORTHO05D003666 6.8e-20 102.1 252 31.3
FvH4_2g25871 Fragaria vesca HOM05D003981 ORTHO05D003666 2.0e-19 100.5 216 34.3
FAN14G5156 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.4e-19 99.4 127 44.9
Prupe.7G195100 Prunus persica HOM05D003981 ORTHO05D003666 5.7e-19 99.0 147 40.8
FAN08G0901 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.5e-19 98.6 247 32.0
FvH4_5g06780 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-18 97.8 249 31.7
FAN18G0593 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-18 97.8 249 31.7
FAN18G0964 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.2e-18 97.1 216 33.8
Actinidia06940 Actinidia chinensis HOM05D003981 ORTHO05D003666 2.8e-18 96.7 152 34.9
FvH4_3g13181 Fragaria vesca HOM05D003981 ORTHO05D003666 2.8e-18 96.7 207 34.8
FAN19G2493 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-18 96.3 204 33.8
FvH4_5g31171 Fragaria vesca HOM05D003981 ORTHO05D003666 8.3e-18 95.1 258 32.2
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 1.4e-17 94.4 145 33.8
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-17 94.4 228 31.1
FAN18G0802 Fragaria x ananassa HOM05D002662 ORTHO05D003666 1.8e-17 94.0 151 39.1
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 2.4e-17 93.6 145 33.1
DCAR_002092 Daucus carota HOM05D000007 ORTHO05D003666 3.1e-17 93.2 143 35.7
QL07p033575 Quercus lobata HOM05D000007 ORTHO05D003666 4.1e-17 92.8 232 31.9
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 4.1e-17 92.8 220 32.7
Ciclev10030374m.g Citrus clementina HOM05D003981 ORTHO05D003666 1.2e-16 91.3 147 38.1
FAN09G0546 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-16 90.9 244 32.8
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-16 90.9 127 42.5
FAN04G1299 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-16 90.5 121 44.6
FvH4_6g45801 Fragaria vesca HOM05D003981 ORTHO05D003666 3.5e-16 89.7 244 32.8
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.5e-16 89.7 239 32.6
FAN13G2076 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-15 88.2 123 42.3
FAN05G1092 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-15 87.0 166 37.3
FAN14G5028 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-15 87.0 166 37.3
DCAR_024299 Daucus carota HOM05D000007 ORTHO05D003666 2.9e-15 86.7 154 35.7
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-15 85.9 207 31.9
FAN02G3644 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.6e-15 85.1 81 50.6
FAN23G0182 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-14 84.3 129 41.1
FAN23G0731 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-14 84.3 129 41.1
FAN23G1358 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-14 84.3 129 41.1
FAN25G0801 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-14 84.0 150 40.0
FAN04G1922 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-14 83.6 237 31.2
FAN08G0796 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-14 83.6 209 31.6
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 4.2e-14 82.8 148 34.5
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 9.5e-14 81.6 116 37.1
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-13 81.3 265 32.1
FvH4_6g47480 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-13 80.9 154 38.3
TWI59G0221 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 2.8e-13 80.1 161 31.1
FAN14G0149 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-13 79.7 81 49.4
FAN14G2642 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-13 79.7 81 49.4
MD11G1006300 Malus domestica HOM05D003981 ORTHO05D003666 6.1e-13 79.0 93 47.3
Haze_25176 Corylus avellana HOM05D000007 ORTHO05D003666 8.0e-13 78.6 146 37.0
FAN02G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.0e-13 78.6 153 37.3
FAN09G0012 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.0e-13 78.6 153 37.9
TWI59G1434 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 8.0e-13 78.6 151 33.1
FAN14G1511 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-12 78.2 154 37.7
Rhsim07G0186100 Rhododendron simsii HOM05D003981 ORTHO05D003666 1.0e-12 78.2 152 32.2
FAN18G3444 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-12 77.8 172 32.6
Ciclev10006577m.g Citrus clementina HOM05D003981 ORTHO05D003666 2.3e-12 77.0 154 31.8
FAN04G2735 Fragaria x ananassa HOM05D002662 ORTHO05D002957 2.3e-12 77.0 192 32.3
MD11G1005600 Malus domestica HOM05D003981 ORTHO05D003666 4.0e-12 76.3 96 44.8
Atru.chr9.1609 Acer truncatum HOM05D003981 ORTHO05D003666 5.2e-12 75.9 164 37.2
FvH4_1g20161 Fragaria vesca HOM05D003981 ORTHO05D003666 5.2e-12 75.9 228 31.1
HanXRQChr13g0419481 Helianthus annuus HOM05D000007 ORTHO05D003666 5.2e-12 75.9 129 34.1
Nn1g03296 Nelumbo nucifera HOM05D000007 ORTHO05D003666 5.2e-12 75.9 140 29.3
Atru.chr5.2441 Acer truncatum HOM05D003981 ORTHO05D003666 6.8e-12 75.5 160 35.0
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 6.8e-12 75.5 160 35.0
QL05p054335 Quercus lobata HOM05D000007 ORTHO05D003666 1.2e-11 74.7 156 34.0
FvH4_6g47440 Fragaria vesca HOM05D003981 ORTHO05D003666 2.6e-11 73.6 153 36.6
FAN02G2482 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-11 73.6 209 28.7
Cfa009862 Carpinus fangiana HOM05D003981 ORTHO05D003666 4.4e-11 72.8 145 35.2
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.7e-11 72.4 156 30.8
FAN19G1135 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.5e-11 72.0 208 30.8
CiPaw.13G152900 Carya illinoinensis HOM05D000007 ORTHO05D003666 1.7e-10 70.9 165 32.7
HanXRQChr13g0419531 Helianthus annuus HOM05D000007 ORTHO05D003666 1.7e-10 70.9 135 34.1
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 2.2e-10 70.5 148 30.4
HanXRQChr13g0419581 Helianthus annuus HOM05D000007 ORTHO05D003666 6.3e-10 68.9 143 33.6
Actinidia24334 Actinidia chinensis HOM05D003981 ORTHO05D003666 1.8e-09 67.4 179 26.3
HanXRQChr13g0418481 Helianthus annuus HOM05D000007 ORTHO05D003666 5.4e-09 65.9 141 31.2
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.0e-09 65.5 152 30.3
Eucgr.E01420 Eucalyptus grandis HOM05D000007 ORTHO05D003666 9.2e-09 65.1 148 31.8
HanXRQChr13g0419571 Helianthus annuus HOM05D000007 ORTHO05D003666 1.2e-08 64.7 140 34.3
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-08 64.7 152 30.3
Actinidia06939 Actinidia chinensis HOM05D003981 ORTHO05D003666 2.0e-08 63.9 70 44.3
FAN11G0099 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-08 63.9 175 32.0
ECA238G0967 Erigeron canadensis HOM05D000007 ORTHO05D003666 3.5e-08 63.2 222 28.8
FAN13G2481 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.5e-08 63.2 242 28.9
PSO063G3569 Papaver somniferum HOM05D000007 ORTHO05D000017 3.5e-08 63.2 161 27.3
DCAR_016817 Daucus carota HOM05D000007 ORTHO05D003666 4.5e-08 62.8 149 30.2
HanXRQChr13g0419551 Helianthus annuus HOM05D000007 ORTHO05D003666 5.9e-08 62.4 86 40.7
COL.COLO4_20224 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.8e-08 62.0 149 25.5
PSO135G0570 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-07 61.2 153 28.8
vmacro01618 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.3e-07 61.2 190 22.6
vmacro23030 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.3e-07 61.2 190 23.2
Aqoxy4G02034 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 1.7e-07 60.8 139 33.8
FAN02G1117 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-07 60.8 70 50.0
vmacro23187 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.7e-07 60.8 190 22.6
Aqoxy4G02063 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 2.3e-07 60.5 150 28.0
Prupe.2G095600 Prunus persica HOM05D003981 ORTHO05D003666 2.3e-07 60.5 81 44.4
PSO648G0097 Papaver somniferum HOM05D000007 ORTHO05D000017 2.9e-07 60.1 146 26.7
Eucgr.J00721 Eucalyptus grandis HOM05D000007 ORTHO05D003666 3.9e-07 59.7 130 29.2
FAN23G0843 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.9e-07 59.7 88 37.5
FvH4_1g00551 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-06 58.2 235 26.0
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 1.5e-06 57.8 151 26.5
PGSC0003DMG400022858 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.5e-06 57.8 140 22.9
HanXRQChr13g0419561 Helianthus annuus HOM05D000007 ORTHO05D003666 1.9e-06 57.4 141 31.2
Medtr3g024110 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-06 57.4 146 30.8
Peaxi162Scf00129g01225 Petunia axillaris HOM05D009844 ORTHO05D007252 1.9e-06 57.4 176 26.1
Prupe.1G170000 Prunus persica HOM05D000007 ORTHO05D000521 1.9e-06 57.4 155 27.7
Medtr0044s0300 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-06 57.0 186 25.3
QL09p021305 Quercus lobata HOM05D000007 ORTHO05D000039 3.3e-06 56.6 167 27.5
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 4.3e-06 56.2 121 28.9
DCAR_019702 Daucus carota HOM05D000007 ORTHO05D000521 4.3e-06 56.2 118 30.5
FAN02G3066 Fragaria x ananassa HOM05D000995 ORTHO05D199538 7.3e-06 55.5 31 80.6
Lsat_1_v5_gn_2_53440 Lactuca sativa HOM05D003981 ORTHO05D003666 7.3e-06 55.5 148 30.4


User provided reference genes

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