Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1346 Fragaria x ananassa HOM05D012028 ORTHO05D010778 2.3e-102 375.6 191 100.0
FAN05G4491 Fragaria x ananassa HOM05D012028 ORTHO05D010778 3.3e-96 355.1 191 94.8
FvH4_6g46170 Fragaria vesca HOM05D012028 ORTHO05D010778 1.2e-93 346.7 191 92.1
FAN02G2376 Fragaria x ananassa HOM05D012028 ORTHO05D010778 8.3e-92 340.5 211 84.4
FAN14G3635 Fragaria x ananassa HOM05D012028 ORTHO05D010778 3.3e-40 169.1 94 91.5
Prupe.3G247600 Prunus persica HOM05D012028 ORTHO05D010778 5.0e-36 155.2 224 47.3
MD09G1076500 Malus domestica HOM05D012028 ORTHO05D010778 2.1e-26 123.2 253 37.5
MD17G1067000 Malus domestica HOM05D012028 ORTHO05D010778 5.0e-20 102.1 272 32.4
QL02p065009 Quercus lobata HOM05D012028 ORTHO05D010778 6.5e-20 101.7 211 38.9
Cfa007707 Carpinus fangiana HOM05D012028 ORTHO05D010778 4.1e-14 82.4 236 33.9
Manes.01G104500 Manihot esculenta HOM05D011223 ORTHO05D010778 5.9e-13 78.6 234 32.9
Dinv34899 Davidia involucrata HOM05D004302 ORTHO05D004939 5.0e-12 75.5 184 34.8
Potri.004G112600 Populus trichocarpa HOM05D011223 ORTHO05D010778 1.9e-11 73.6 220 30.9
Dinv33878 Davidia involucrata HOM05D011223 ORTHO05D010778 3.6e-10 69.3 222 33.3
CANSAT64G2872 Cannabis sativa HOM05D012028 ORTHO05D010778 1.4e-09 67.4 47 70.2
Potri.017G102200 Populus trichocarpa HOM05D011223 ORTHO05D010778 3.0e-09 66.2 220 28.6
AUR62009463 Chenopodium quinoa HOM05D027608 ORTHO05D010778 5.2e-09 65.5 237 27.8
PSO017G6836 Papaver somniferum HOM05D036605 ORTHO05D016556 1.2e-08 64.3 207 28.5
ClCG07G016120 Citrullus lanatus HOM05D034995 ORTHO05D010778 2.0e-08 63.5 196 33.2
Manes.02G060950 Manihot esculenta HOM05D011223 ORTHO05D010778 2.0e-08 63.5 204 31.9
Sed0011744 Sechium edule HOM05D034995 ORTHO05D010778 2.6e-08 63.2 51 64.7
Actinidia18091 Actinidia chinensis HOM05D011223 ORTHO05D010778 4.4e-08 62.4 228 30.7
CsaV3_4G009950 Cucumis sativus L. HOM05D034995 ORTHO05D010778 4.4e-08 62.4 196 30.1
Sabra17G0088100 Salix brachista HOM05D011223 ORTHO05D010778 4.4e-08 62.4 216 28.2
AUR62023145 Chenopodium quinoa HOM05D027608 ORTHO05D010778 1.7e-07 60.5 223 27.8
Gohir.A11G160400 Gossypium hirsutum HOM05D013808 ORTHO05D010778 1.7e-07 60.5 191 31.4
Gohir.D11G166600 Gossypium hirsutum HOM05D013808 ORTHO05D010778 1.7e-07 60.5 191 30.9
Gorai.007G177600 Gossypium raimondii HOM05D013808 ORTHO05D010778 1.7e-07 60.5 191 30.9
MD09G1076400 Malus domestica HOM05D012028 ORTHO05D010778 2.8e-07 59.7 77 50.6
Nn4g23563 Nelumbo nucifera HOM05D011223 ORTHO05D010778 3.7e-07 59.3 213 25.8
COL.COLO4_10646 Corchorus olitorius HOM05D013808 ORTHO05D010778 6.3e-07 58.5 61 54.1
PSO478G1594 Papaver somniferum HOM05D036605 ORTHO05D016556 8.3e-07 58.2 203 25.6
Cpa.g.sc14.249 Carica papaya HOM05D012028 ORTHO05D010778 1.8e-06 57.0 47 61.7
Thecc.04G108700 Theobroma cacao HOM05D013808 ORTHO05D010778 1.8e-06 57.0 43 67.4
PSO782G3053 Papaver somniferum HOM05D012028 ORTHO05D305714 3.1e-06 56.2 141 30.5


User provided reference genes

Program Settings