Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1180 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.1e-112 409.8 193 100.0
FAN03G2305 Fragaria x ananassa HOM05D009150 ORTHO05D005238 2.0e-85 319.3 184 83.7
FvH4_1g22101 Fragaria vesca HOM05D009150 ORTHO05D005238 1.3e-84 316.6 188 83.0
FAN19G3080 Fragaria x ananassa HOM05D009150 ORTHO05D005238 2.2e-63 246.1 186 66.7
FvH4_6g31722 Fragaria vesca HOM05D009150 ORTHO05D005238 7.0e-62 241.1 184 66.3
FAN10G3952 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.2e-58 230.3 162 71.0
FvH4_3g33941 Fragaria vesca HOM05D009150 ORTHO05D005238 2.0e-53 213.0 135 77.0
FAN11G3743 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.9e-51 206.5 128 78.9
FAN01G2487 Fragaria x ananassa HOM05D009150 ORTHO05D005238 2.2e-47 193.0 132 73.5
FAN03G0064 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.3e-44 183.7 116 78.4
FAN06G0916 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.1e-43 180.6 113 77.9
FAN01G2893 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.6e-42 176.8 113 77.0
FvH4_5g23680 Fragaria vesca HOM05D018539 ORTHO05D005238 5.7e-32 141.7 165 40.0
FAN20G1588 Fragaria x ananassa HOM05D009150 ORTHO05D005238 8.3e-31 137.9 76 89.5
FAN14G0817 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.4e-30 136.3 167 38.3
FAN16G3690 Fragaria x ananassa HOM05D009150 ORTHO05D005238 5.9e-29 131.7 73 82.2
FAN18G2146 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.0e-28 128.6 175 37.7
FvH4_5g02440 Fragaria vesca HOM05D009150 ORTHO05D005238 6.6e-28 128.3 198 42.4
FAN11G2026 Fragaria x ananassa HOM05D007432 ORTHO05D005238 8.6e-28 127.9 166 38.0
RcHm_v2.0_Chr1g0320861 Rosa chinensis HOM05D009201 ORTHO05D005238 7.3e-27 124.8 158 35.4
FAN05G1869 Fragaria x ananassa HOM05D007432 ORTHO05D005238 6.1e-26 121.7 159 38.4
FAN20G1730 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.0e-25 120.9 162 34.0
FvH4_6g05152 Fragaria vesca HOM05D007432 ORTHO05D005238 2.3e-25 119.8 141 40.4
FAN07G0659 Fragaria x ananassa HOM05D007432 ORTHO05D005238 7.5e-24 114.8 160 36.2
FvH4_3g20011 Fragaria vesca HOM05D018539 ORTHO05D025542 1.3e-23 114.0 165 37.0
FAN25G2326 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.2e-23 113.2 167 35.9
FAN08G0305 Fragaria x ananassa HOM05D009201 ORTHO05D005238 7.0e-22 108.2 172 30.2
RcHm_v2.0_Chr3g0472781 Rosa chinensis HOM05D009201 ORTHO05D005238 1.2e-21 107.5 155 29.7
FAN03G0184 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.6e-21 107.1 146 36.3
FvH4_4g08031 Fragaria vesca HOM05D009150 ORTHO05D005238 3.5e-21 105.9 74 64.9
FvH4_3g26062 Fragaria vesca HOM05D009201 ORTHO05D005238 1.7e-20 103.6 170 28.2
FvH4_3g31211 Fragaria vesca HOM05D009150 ORTHO05D005238 3.0e-20 102.8 79 59.5
FAN18G3942 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.5e-19 100.5 96 40.6
FAN04G0512 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.3e-19 99.4 89 43.8
FAN05G2877 Fragaria x ananassa HOM05D007432 ORTHO05D005238 3.3e-19 99.4 122 38.5
FAN08G2279 Fragaria x ananassa HOM05D009201 ORTHO05D005238 4.3e-19 99.0 89 42.7
FvH4_3g18871 Fragaria vesca HOM05D007432 ORTHO05D005238 5.6e-19 98.6 97 41.2
FvH4_5g15791 Fragaria vesca HOM05D007432 ORTHO05D005238 7.3e-19 98.2 160 31.9
FvH4_5g38943 Fragaria vesca HOM05D007432 ORTHO05D005238 9.5e-19 97.8 96 46.9
FAN17G0381 Fragaria x ananassa HOM05D007432 ORTHO05D005238 3.6e-18 95.9 158 33.5
FAN18G1345 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.6e-18 95.9 89 41.6
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 4.7e-18 95.5 129 32.6
FvH4_6g10481 Fragaria vesca HOM05D007432 ORTHO05D005238 4.7e-18 95.5 125 36.8
FvH4_4g16721 Fragaria vesca HOM05D009201 ORTHO05D005238 6.2e-18 95.1 154 29.2
FAN13G1485 Fragaria x ananassa HOM05D009201 ORTHO05D005238 6.2e-18 95.1 89 40.4
FAN04G0389 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.3e-17 93.2 161 32.9
FAN06G1061 Fragaria x ananassa HOM05D009150 ORTHO05D005238 6.8e-17 91.7 57 73.7
FAN12G1939 Fragaria x ananassa HOM05D009201 ORTHO05D005238 2.0e-16 90.1 154 27.3
FAN09G0991 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.8e-16 88.6 158 32.9
FvH4_6g14353 Fragaria vesca HOM05D007432 ORTHO05D005238 1.7e-15 87.0 77 48.1
FAN10G0271 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.7e-15 87.0 159 35.2
FAN18G4159 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.7e-15 87.0 74 55.4
FAN14G1548 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.9e-15 86.3 73 49.3
FvH4_6g26370 Fragaria vesca HOM05D009201 ORTHO05D035607 3.7e-15 85.9 151 28.5
FvH4_3g25832 Fragaria vesca HOM05D009201 ORTHO05D005238 4.9e-15 85.5 154 27.3
FAN21G3598 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.9e-15 85.5 78 44.9
FAN14G3507 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.1e-14 84.3 110 40.0
FAN26G2577 Fragaria x ananassa HOM05D007432 ORTHO05D005238 3.2e-14 82.8 150 32.0
FAN15G2286 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.1e-14 82.4 125 34.4
FvH4_1g26161 Fragaria vesca HOM05D007432 ORTHO05D005238 7.1e-14 81.6 116 36.2
FAN17G2285 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.2e-13 80.9 122 34.4
FAN14G1768 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.6e-13 80.5 168 27.4
FvH4_3g10870 Fragaria vesca HOM05D007432 ORTHO05D005238 2.1e-13 80.1 75 41.3
FAN27G0036 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.6e-13 79.0 166 28.3
FvH4_2g07920 Fragaria vesca HOM05D007432 ORTHO05D005238 7.8e-13 78.2 64 46.9
FvH4_2g14491 Fragaria vesca HOM05D007432 ORTHO05D005238 1.5e-11 73.9 73 39.7
QL03p060676 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-11 73.9 157 26.8
FAN07G1797 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.6e-11 72.0 120 30.8
FAN24G0744 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.2e-10 70.9 158 29.7
FAN24G1105 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.8e-10 69.7 110 35.5
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-10 69.7 167 24.6
FAN02G1226 Fragaria x ananassa HOM05D007432 ORTHO05D005238 8.1e-10 68.2 77 45.5
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.1e-10 68.2 172 24.4
QL03p061166 Quercus lobata HOM05D000003 ORTHO05D000126 8.1e-10 68.2 157 24.8
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 8.1e-10 68.2 157 22.3
Sed0009255 Sechium edule HOM05D000003 ORTHO05D000126 1.4e-09 67.4 162 24.1
QL08p032371 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-09 67.0 150 23.3
FAN09G4372 Fragaria x ananassa HOM05D036571 ORTHO05D005238 2.3e-09 66.6 131 32.8
Atru.chr2.314 Acer truncatum HOM05D000003 ORTHO05D000126 3.1e-09 66.2 165 29.1
AUR62022477 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.1e-09 66.2 159 25.2
FvH4_2g06802 Fragaria vesca HOM05D007432 ORTHO05D005238 3.1e-09 66.2 90 35.6
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.1e-09 66.2 167 23.4
FAN12G4356 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.0e-09 65.9 159 24.5
QL04p012421 Quercus lobata HOM05D000003 ORTHO05D000126 4.0e-09 65.9 162 24.7
Sed0014557 Sechium edule HOM05D000003 ORTHO05D000126 4.0e-09 65.9 167 22.2
Lj6g0025856 Lotus japonicus HOM05D000003 ORTHO05D000126 5.2e-09 65.5 159 20.8
QL01p005367 Quercus lobata HOM05D000003 ORTHO05D000126 5.2e-09 65.5 159 24.5
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.2e-09 65.5 167 25.1
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.2e-09 65.5 167 25.1
TWI39G0375 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 6.8e-09 65.1 177 26.0
FvH4_4g07081 Fragaria vesca HOM05D008119 ORTHO05D010214 8.9e-09 64.7 115 25.2
QL06p049455 Quercus lobata HOM05D000003 ORTHO05D000126 8.9e-09 64.7 81 32.1
Rhsim01G0092500 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.9e-09 64.7 173 26.6
RcHm_v2.0_Chr5g0032121 Rosa chinensis HOM05D008430 ORTHO05D011995 8.9e-09 64.7 148 26.4
FAN06G2363 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.2e-08 64.3 54 44.4
FAN15G0005 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.2e-08 64.3 146 26.7
FvH4_4g21881 Fragaria vesca HOM05D009201 ORTHO05D005238 1.5e-08 63.9 55 43.6
TWI56G0633 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.5e-08 63.9 182 25.8
EL10Ac8g19714 Beta vulgaris HOM05D000003 ORTHO05D000126 2.0e-08 63.5 159 23.9
Lj6g0022847 Lotus japonicus HOM05D000003 ORTHO05D000126 2.0e-08 63.5 162 24.1
FAN16G2163 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.6e-08 63.2 50 46.0
LjContig00312_ERROPOS870357g0011324 Lotus japonicus HOM05D000003 ORTHO05D000126 2.6e-08 63.2 159 20.8
COL.COLO4_27112 Corchorus olitorius HOM05D021065 ORTHO05D000126 3.4e-08 62.8 158 22.8
FvH4_6g34713 Fragaria vesca HOM05D009150 ORTHO05D005238 3.4e-08 62.8 70 40.0
QL06p022045 Quercus lobata HOM05D000003 ORTHO05D000126 3.4e-08 62.8 162 25.9
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.4e-08 62.8 166 24.7
Atru.chr13.2083 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-08 62.4 74 33.8
FAN06G3634 Fragaria x ananassa HOM05D009150 ORTHO05D005238 4.4e-08 62.4 112 34.8
Manes.03G022751 Manihot esculenta HOM05D000003 ORTHO05D000004 4.4e-08 62.4 152 25.7
Sed0016422 Sechium edule HOM05D000003 ORTHO05D000126 4.4e-08 62.4 103 28.2
Atru.chr10.301 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-08 62.0 165 28.5
Atru.chr4.887 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-08 62.0 74 33.8
FAN06G0208 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.8e-08 62.0 111 31.5
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.8e-08 62.0 166 24.1
Atru.chr8.1207 Acer truncatum HOM05D000003 ORTHO05D000126 7.6e-08 61.6 74 36.5
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 7.6e-08 61.6 172 22.1
Atru.chr12.2328 Acer truncatum HOM05D000003 ORTHO05D000126 9.9e-08 61.2 73 35.6
Atru.chr13.1937 Acer truncatum HOM05D000003 ORTHO05D000004 9.9e-08 61.2 170 25.3
COL.COLO4_19745 Corchorus olitorius HOM05D010514 ORTHO05D000126 9.9e-08 61.2 157 24.8
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-07 60.8 179 24.6
AUR62027518 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.3e-07 60.8 161 26.7
QL06p008405 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-07 60.8 159 23.3
FAN22G0097 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.7e-07 60.5 60 35.0
FAN27G3311 Fragaria x ananassa HOM05D039895 ORTHO05D035227 1.7e-07 60.5 70 40.0
COL.COLO4_27452 Corchorus olitorius HOM05D013553 ORTHO05D000126 2.2e-07 60.1 151 21.9
FvH4_4g01621 Fragaria vesca HOM05D008119 ORTHO05D010214 2.2e-07 60.1 159 22.6
QL03p026642 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-07 60.1 161 23.0
QL07p007097 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-07 60.1 73 34.2
Atru.chr12.1718 Acer truncatum HOM05D000003 ORTHO05D000126 2.9e-07 59.7 67 37.3
Atru.chr3.1852 Acer truncatum HOM05D000003 ORTHO05D000126 2.9e-07 59.7 162 26.5
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 2.9e-07 59.7 170 22.9
FAN17G0650 Fragaria x ananassa HOM05D009201 ORTHO05D005238 2.9e-07 59.7 67 35.8
Sed0022123 Sechium edule HOM05D021366 ORTHO05D000126 2.9e-07 59.7 162 24.1
Atru.chr3.1630 Acer truncatum HOM05D000003 ORTHO05D000126 3.7e-07 59.3 74 32.4
Dinv06832 Davidia involucrata HOM05D000003 ORTHO05D000126 3.7e-07 59.3 73 31.5
FvH4_2g07851 Fragaria vesca HOM05D007432 ORTHO05D005238 3.7e-07 59.3 46 45.7
FAN07G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.7e-07 59.3 157 23.6
QL04p013046 Quercus lobata HOM05D000003 ORTHO05D000126 3.7e-07 59.3 141 25.5
Atru.chr3.1685 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-07 58.9 74 33.8
Dinv06062 Davidia involucrata HOM05D000003 ORTHO05D000126 4.9e-07 58.9 155 22.6
FAN10G1838 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.9e-07 58.9 159 22.6
FAN27G1221 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.9e-07 58.9 74 36.5
QL05p065665 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 58.9 73 34.2
QL07p020169 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 58.9 160 24.4
RcHm_v2.0_Chr7g0243191 Rosa chinensis HOM05D007432 ORTHO05D005238 4.9e-07 58.9 43 58.1
Lj5P129T22 Lonicera japonica HOM05D000003 ORTHO05D000126 6.4e-07 58.5 163 23.3
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 6.4e-07 58.5 171 23.4
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 6.4e-07 58.5 165 23.6
FvH4_4g12651 Fragaria vesca HOM05D008430 ORTHO05D010682 1.1e-06 57.8 143 22.4
Sed0003577 Sechium edule HOM05D000003 ORTHO05D000126 1.1e-06 57.8 187 21.9
Atru.chr4.156 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-06 57.4 166 22.3
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-06 57.4 72 31.9
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-06 57.4 170 22.9
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-06 57.4 91 29.7
TWI38G1337 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.4e-06 57.4 165 24.2
CANSAT25G1444 Cannabis sativa HOM05D000003 ORTHO05D000126 1.9e-06 57.0 166 18.7
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.9e-06 57.0 167 24.0
Atru.chr11.2021 Acer truncatum HOM05D000003 ORTHO05D000126 2.4e-06 56.6 162 25.3
Atru.chr7.549 Acer truncatum HOM05D000003 ORTHO05D000126 2.4e-06 56.6 74 35.1
FvH4_2g14911 Fragaria vesca HOM05D003375 ORTHO05D004719 2.4e-06 56.6 73 35.6
FvH4_3g22921 Fragaria vesca HOM05D000003 ORTHO05D000126 2.4e-06 56.6 88 23.9
FvH4_5g37180 Fragaria vesca HOM05D000003 ORTHO05D011454 2.4e-06 56.6 88 25.0
QL03p057523 Quercus lobata HOM05D000003 ORTHO05D000126 2.4e-06 56.6 116 22.4
FAN18G4118 Fragaria x ananassa HOM05D007432 ORTHO05D005238 3.2e-06 56.2 95 32.6
QL03p023077 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 56.2 170 23.5
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 4.1e-06 55.8 166 22.9
Atru.chr7.1046 Acer truncatum HOM05D000003 ORTHO05D000126 4.1e-06 55.8 75 37.3
AUR62016456 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.1e-06 55.8 120 29.2
COL.COLO4_24157 Corchorus olitorius HOM05D007567 ORTHO05D000126 4.1e-06 55.8 167 20.4
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 4.1e-06 55.8 171 22.8
Dinv16401 Davidia involucrata HOM05D024039 ORTHO05D000007 4.1e-06 55.8 116 21.6
FAN01G0891 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.1e-06 55.8 92 34.8
FAN22G0625 Fragaria x ananassa HOM05D017501 ORTHO05D020690 4.1e-06 55.8 103 21.4
QL02p019249 Quercus lobata HOM05D000003 ORTHO05D000126 4.1e-06 55.8 163 22.1
Sed0016457 Sechium edule HOM05D000003 ORTHO05D000126 4.1e-06 55.8 168 23.2
Sed0019411 Sechium edule HOM05D000003 ORTHO05D000126 4.1e-06 55.8 168 22.6
COL.COLO4_19132 Corchorus olitorius HOM05D007567 ORTHO05D000126 5.4e-06 55.5 106 24.5
Rhsim09G0068100 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.4e-06 55.5 165 23.6
CANSAT64G1035 Cannabis sativa HOM05D000003 ORTHO05D000126 7.1e-06 55.1 160 18.8
COL.COLO4_15219 Corchorus olitorius HOM05D013553 ORTHO05D000126 7.1e-06 55.1 151 21.9
COL.COLO4_21887 Corchorus olitorius HOM05D007567 ORTHO05D000126 7.1e-06 55.1 167 21.6
COL.COLO4_24033 Corchorus olitorius HOM05D000003 ORTHO05D000126 7.1e-06 55.1 168 20.8
FAN08G0312 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.1e-06 55.1 140 22.9
Lj4g0002418 Lotus japonicus HOM05D000003 ORTHO05D000126 7.1e-06 55.1 164 20.7
QL04p031358 Quercus lobata HOM05D000003 ORTHO05D000126 7.1e-06 55.1 76 28.9
Atru.chr9.1112 Acer truncatum HOM05D000003 ORTHO05D000126 9.2e-06 54.7 74 31.1
Rhsim08G0119300 Rhododendron simsii HOM05D000003 ORTHO05D000126 9.2e-06 54.7 169 24.9
RcHm_v2.0_Chr2g0109251 Rosa chinensis HOM05D009201 ORTHO05D005238 9.2e-06 54.7 98 29.6


User provided reference genes

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