Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1160 Fragaria x ananassa HOM05D003449 ORTHO05D044649 9.2e-78 293.5 150 100.0
FvH4_1g00120 Fragaria vesca HOM05D003449 ORTHO05D004133 8.1e-34 147.5 278 40.3
FvH4_6g52520 Fragaria vesca HOM05D003449 ORTHO05D004133 2.5e-27 125.9 64 98.4
FAN14G1536 Fragaria x ananassa HOM05D003449 ORTHO05D004133 7.4e-27 124.4 64 96.9
FAN05G5719 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.8e-26 122.5 70 90.0
FAN28G2575 Fragaria x ananassa HOM05D003449 ORTHO05D004133 5.8e-24 114.8 67 88.1
RcHm_v2.0_Chr2g0084431 Rosa chinensis HOM05D003449 ORTHO05D004133 1.2e-21 107.1 69 79.7
Dinv24747 Davidia involucrata HOM05D003449 ORTHO05D004133 2.2e-18 96.3 74 64.9
QL10p064632 Quercus lobata HOM05D003449 ORTHO05D004133 4.8e-18 95.1 71 69.0
QL10p065753 Quercus lobata HOM05D003449 ORTHO05D004133 4.8e-18 95.1 71 69.0
Atru.chr8.1216 Acer truncatum HOM05D003449 ORTHO05D004133 1.1e-17 94.0 86 60.5
Cfa008526 Carpinus fangiana HOM05D003449 ORTHO05D004133 1.1e-17 94.0 72 66.7
MD15G1142600 Malus domestica HOM05D003449 ORTHO05D004133 1.4e-17 93.6 70 70.0
Sopen12g008760 Solanum pennellii HOM05D003449 ORTHO05D004133 1.8e-17 93.2 73 61.6
Haze_11115 Corylus avellana HOM05D003449 ORTHO05D004133 2.4e-17 92.8 72 66.7
Prupe.7G270600 Prunus persica HOM05D003449 ORTHO05D004133 2.4e-17 92.8 73 65.8
CANSAT54G1991 Cannabis sativa HOM05D003449 ORTHO05D004133 6.9e-17 91.3 70 67.1
Nitab4.5_0007046g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.2e-16 90.5 73 60.3
PGSC0003DMG400029361 Solanum tuberosum HOM05D003449 ORTHO05D004133 1.2e-16 90.5 70 64.3
Gorai.009G402700 Gossypium raimondii HOM05D003449 ORTHO05D004133 1.5e-16 90.1 81 60.5
Actinidia18391 Actinidia chinensis HOM05D003449 ORTHO05D004133 2.6e-16 89.4 78 57.7
COL.COLO4_20652 Corchorus olitorius HOM05D003449 ORTHO05D004133 2.6e-16 89.4 122 46.7
Sopen12g032430 Solanum pennellii HOM05D003449 ORTHO05D004133 3.4e-16 89.0 71 62.0
GSVIVG01038259001 Vitis vinifera HOM05D003449 ORTHO05D004133 3.4e-16 89.0 70 62.9
BcaB06g28571 Brassica carinata HOM05D003449 ORTHO05D004133 4.5e-16 88.6 139 41.0
CSS0008419 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 4.5e-16 88.6 68 63.2
EL10Ac3g06177 Beta vulgaris HOM05D003449 ORTHO05D004133 7.6e-16 87.8 71 63.4
AUR62002491 Chenopodium quinoa HOM05D003449 ORTHO05D004133 7.6e-16 87.8 72 63.9
AL4G27160 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 1.0e-15 87.4 76 60.5
AT2G31870 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 1.0e-15 87.4 76 59.2
AUR62023694 Chenopodium quinoa HOM05D003449 ORTHO05D004133 1.0e-15 87.4 70 64.3
VMungo1215G1665 Vigna mungo HOM05D003449 ORTHO05D004133 1.0e-15 87.4 69 65.2
Gohir.A01G231600 Gossypium hirsutum HOM05D003449 ORTHO05D004133 1.3e-15 87.0 66 66.7
Gohir.D01G221700 Gossypium hirsutum HOM05D003449 ORTHO05D004133 1.3e-15 87.0 66 66.7
Gohir.D04G099801 Gossypium hirsutum HOM05D003449 ORTHO05D004133 1.3e-15 87.0 66 66.7
Gorai.002G268300 Gossypium raimondii HOM05D003449 ORTHO05D004133 1.3e-15 87.0 66 66.7
Nitab4.5_0000160g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.7e-15 86.7 87 54.0
Phvul.007G074100 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.7e-15 86.7 69 63.8
Phvul.007G277700 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.7e-15 86.7 69 63.8
Cpa.g.sc9.246 Carica papaya HOM05D003449 ORTHO05D004133 2.2e-15 86.3 74 60.8
CAN.G566.43 Capsicum annuum HOM05D003449 ORTHO05D004133 2.9e-15 85.9 71 57.7
CiPaw.01G202400 Carya illinoinensis HOM05D003449 ORTHO05D004133 2.9e-15 85.9 72 58.3
Thecc.05G001100 Theobroma cacao HOM05D003449 ORTHO05D004133 2.9e-15 85.9 72 63.9
SGA_v2.0_scaffold319G48551 Striga asiatica HOM05D003449 ORTHO05D004133 3.8e-15 85.5 71 64.8
Migut.G00914 Erythranthe guttata HOM05D003449 ORTHO05D004133 5.0e-15 85.1 68 64.7
BcaC02g07961 Brassica carinata HOM05D003449 ORTHO05D004133 6.5e-15 84.7 139 40.3
CSS0049757 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 6.5e-15 84.7 68 60.3
Sp4g14220 Schrenkiella parvula HOM05D003449 ORTHO05D004133 6.5e-15 84.7 139 40.3
Ah.07g203300 Amaranthus hybridus HOM05D003449 ORTHO05D004133 8.5e-15 84.3 69 60.9
Glyma.11G010700 Glycine max HOM05D003449 ORTHO05D004133 1.1e-14 84.0 75 60.0
Rhsim02G0176000 Rhododendron simsii HOM05D003449 ORTHO05D004133 1.4e-14 83.6 79 54.4
Rhsim09G0002700 Rhododendron simsii HOM05D003449 ORTHO05D004133 1.4e-14 83.6 79 54.4
Thhalv10016696m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 1.9e-14 83.2 139 39.6
CARHR125560 Cardamine hirsuta HOM05D003449 ORTHO05D004133 2.5e-14 82.8 76 57.9
TWI63G1020 Tripterygium wilfordii HOM05D003449 ORTHO05D004133 2.5e-14 82.8 74 60.8
EL10Ac3g06174 Beta vulgaris HOM05D003449 ORTHO05D004133 3.2e-14 82.4 69 60.9
Carub.0004s1317 Capsella rubella HOM05D003449 ORTHO05D004133 3.2e-14 82.4 76 57.9
Atru.chr8.1212 Acer truncatum HOM05D003449 ORTHO05D004133 5.5e-14 81.6 80 57.5
Ciclev10019560m.g Citrus clementina HOM05D003449 ORTHO05D004133 5.5e-14 81.6 72 58.3
Sc25g0002200 Simmondsia chinensis HOM05D003449 ORTHO05D004133 5.5e-14 81.6 76 53.9
SGA_v2.0_scaffold12G06234 Striga asiatica HOM05D003449 ORTHO05D004133 5.5e-14 81.6 68 60.3
CSS0013125 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 7.2e-14 81.3 68 58.8
Sabra17G0006000 Salix brachista HOM05D003449 ORTHO05D004133 7.2e-14 81.3 69 58.0
Lj6g0003881 Lotus japonicus HOM05D003449 ORTHO05D004133 9.3e-14 80.9 73 58.9
LjContig00222g0025650 Lotus japonicus HOM05D003449 ORTHO05D004133 9.3e-14 80.9 73 58.9
Potri.017G002000 Populus trichocarpa HOM05D003449 ORTHO05D004133 9.3e-14 80.9 69 59.4
THA.LOC104800938 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 9.3e-14 80.9 72 58.3
Aa31LG5G5180 Aethionema arabicum HOM05D003449 ORTHO05D004133 1.2e-13 80.5 76 55.3
Cc03_g16150 Coffea canephora HOM05D003449 ORTHO05D004133 1.2e-13 80.5 78 59.0
Duzib128G1428 Durio zibethinus HOM05D003449 ORTHO05D004133 1.2e-13 80.5 72 59.7
SGA_v2.0_scaffold215G42309 Striga asiatica HOM05D003449 ORTHO05D004133 1.2e-13 80.5 69 62.3
Lsat_1_v5_gn_1_77061 Lactuca sativa HOM05D003449 ORTHO05D004133 2.1e-13 79.7 75 56.0
Manes.05G207700 Manihot esculenta HOM05D003449 ORTHO05D004133 2.1e-13 79.7 73 57.5
BraA04t17976Z Brassica rapa HOM05D003449 ORTHO05D004133 4.6e-13 78.6 139 38.1
A04p24550 Brassica napus HOM05D003449 ORTHO05D004133 6.1e-13 78.2 139 38.1
PSO675G3012 Papaver somniferum HOM05D003449 ORTHO05D004133 6.1e-13 78.2 83 51.8
Ca_14797_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 7.9e-13 77.8 76 55.3
Cc03_g16130 Coffea canephora HOM05D003449 ORTHO05D044649 7.9e-13 77.8 69 60.9
Lalb_Chr09g0320201 Lupinus albus HOM05D003449 ORTHO05D004133 7.9e-13 77.8 74 59.5
Nn1g09408 Nelumbo nucifera HOM05D003449 ORTHO05D004133 7.9e-13 77.8 77 54.5
Ca_14410_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 1.0e-12 77.4 74 55.4
arahy.Tifrunner.gnm1.ann1.4WT42H Arachis hypogaea HOM05D003449 ORTHO05D004133 1.8e-12 76.6 73 56.2
C04p61440 Brassica napus HOM05D003449 ORTHO05D004133 1.8e-12 76.6 76 55.3
BolC4t27628H Brassica oleracea HOM05D003449 ORTHO05D004133 1.8e-12 76.6 76 55.3
Phvul.002G039900 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.8e-12 76.6 70 58.6
Sed0014321 Sechium edule HOM05D003449 ORTHO05D004133 2.3e-12 76.3 74 56.8
arahy.Tifrunner.gnm1.ann1.D2PEHJ Arachis hypogaea HOM05D003449 ORTHO05D004133 3.0e-12 75.9 73 56.2
arahy.Tifrunner.gnm1.ann1.MLK5V4 Arachis hypogaea HOM05D003449 ORTHO05D004133 3.0e-12 75.9 73 56.2
ECA248G0698 Erigeron canadensis HOM05D003449 ORTHO05D004133 3.0e-12 75.9 75 53.3
Potri.007G145800 Populus trichocarpa HOM05D003449 ORTHO05D004133 3.0e-12 75.9 76 52.6
THA.LOC104800936 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 3.0e-12 75.9 72 51.4
unitig_92.g28209 Utricularia gibba HOM05D003449 ORTHO05D004133 3.0e-12 75.9 74 58.1
BraA04t17975Z Brassica rapa HOM05D003449 ORTHO05D004133 3.9e-12 75.5 76 51.3
CARHR125550 Cardamine hirsuta HOM05D003449 ORTHO05D004133 3.9e-12 75.5 71 54.9
Medtr3g029520 Medicago truncatula HOM05D003449 ORTHO05D004133 3.9e-12 75.5 74 54.1
Os03g0843900 Oryza sativa ssp. japonica HOM05D003449 ORTHO05D004133 3.9e-12 75.5 66 62.1
BcaC02g11292 Brassica carinata HOM05D003449 ORTHO05D004133 5.1e-12 75.1 69 58.0
C04p17950 Brassica napus HOM05D003449 ORTHO05D004133 5.1e-12 75.1 69 58.0
BolC4t23342H Brassica oleracea HOM05D003449 ORTHO05D004133 5.1e-12 75.1 69 58.0
BcaB06g28570 Brassica carinata HOM05D003449 ORTHO05D004133 6.7e-12 74.7 74 51.4
BraA05t20307Z Brassica rapa HOM05D003449 ORTHO05D004133 8.8e-12 74.3 69 56.5
THA.LOC104800934 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 8.8e-12 74.3 77 48.1
A04p24130 Brassica napus HOM05D003449 ORTHO05D004133 1.1e-11 73.9 72 52.8
CsaV3_2G011270 Cucumis sativus L. HOM05D003449 ORTHO05D004133 1.1e-11 73.9 74 54.1
MBI07_g42065_MAGBIO Magnolia biondii HOM05D003449 ORTHO05D004133 1.1e-11 73.9 77 53.2
Sp2g03830 Schrenkiella parvula HOM05D003449 ORTHO05D004133 1.1e-11 73.9 74 51.4
TPR.G12250 Trifolium pratense HOM05D003449 ORTHO05D004133 1.1e-11 73.9 74 54.1
AL4G27130 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 1.5e-11 73.6 69 55.1
BcaC02g07962 Brassica carinata HOM05D003449 ORTHO05D004133 1.5e-11 73.6 76 50.0
MELO3C031172.2 Cucumis melo HOM05D003449 ORTHO05D004133 1.5e-11 73.6 74 54.1
HanXRQChr11g0343511 Helianthus annuus HOM05D003449 ORTHO05D004133 1.5e-11 73.6 75 52.0
SHI01241 Sapria himalayana HOM05D003449 ORTHO05D004133 1.5e-11 73.6 52 69.2
PGR042G0752 Punica granatum HOM05D003449 ORTHO05D004133 1.9e-11 73.2 74 51.4
THA.LOC104800937 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 1.9e-11 73.2 69 56.5
A05p13710 Brassica napus HOM05D003449 ORTHO05D004133 2.5e-11 72.8 69 56.5
A04p24530 Brassica napus HOM05D003449 ORTHO05D004133 3.3e-11 72.4 76 50.0
ATR0743G113 Amborella trichopoda HOM05D003449 ORTHO05D004133 4.3e-11 72.0 82 47.6
BcaB06g28446 Brassica carinata HOM05D003449 ORTHO05D004133 4.3e-11 72.0 101 44.6
Carub.0004s1315 Capsella rubella HOM05D003449 ORTHO05D004133 4.3e-11 72.0 69 53.6
Thhalv10016528m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 4.3e-11 72.0 75 49.3
PGR031G2246 Punica granatum HOM05D003449 ORTHO05D004133 4.3e-11 72.0 80 48.8
BcaB06g28530 Brassica carinata HOM05D003449 ORTHO05D004133 5.7e-11 71.6 70 54.3
C04p61430 Brassica napus HOM05D003449 ORTHO05D004133 5.7e-11 71.6 76 50.0
BolC4t27577H Brassica oleracea HOM05D003449 ORTHO05D004133 5.7e-11 71.6 70 54.3
BolC4t27627H Brassica oleracea HOM05D003449 ORTHO05D004133 5.7e-11 71.6 76 50.0
Carub.0004s1316 Capsella rubella HOM05D003449 ORTHO05D004133 7.4e-11 71.2 75 52.0
Thhalv10017878m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 7.4e-11 71.2 77 50.6
BraA04t17933Z Brassica rapa HOM05D003449 ORTHO05D004133 9.7e-11 70.9 72 51.4
AUR62002371 Chenopodium quinoa HOM05D003449 ORTHO05D004133 9.7e-11 70.9 74 51.4
AT2G31865 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 1.3e-10 70.5 71 53.5
Aa31sc989G10 Aethionema arabicum HOM05D003449 ORTHO05D004133 1.7e-10 70.1 69 50.7
EL10Ac1g02221 Beta vulgaris HOM05D003449 ORTHO05D004133 1.7e-10 70.1 73 50.7
AL4G27150 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 2.2e-10 69.7 71 53.5
Carub.0004s1301 Capsella rubella HOM05D003449 ORTHO05D004133 2.2e-10 69.7 72 48.6
CARHR125360 Cardamine hirsuta HOM05D003449 ORTHO05D004133 2.2e-10 69.7 72 50.0
Eucgr.A00416 Eucalyptus grandis HOM05D003449 ORTHO05D004133 2.2e-10 69.7 80 47.5
HPP92_007075 Vanilla planifolia HOM05D003449 ORTHO05D004133 2.2e-10 69.7 69 47.8
Ah.06g182940 Amaranthus hybridus HOM05D003449 ORTHO05D004133 2.8e-10 69.3 72 48.6
CDE02G4666 Ceratophyllum demersum HOM05D003449 ORTHO05D004133 3.7e-10 68.9 75 50.7
TAR362G0584 Trochodendron aralioides HOM05D003449 ORTHO05D004133 3.7e-10 68.9 71 56.3
FAN26G2706 Fragaria x ananassa HOM05D003449 ORTHO05D004133 8.2e-10 67.8 156 39.1
Zm00001eb064190 Zea mays HOM05D003449 ORTHO05D004133 8.2e-10 67.8 66 57.6
SGA_v2.0_scaffold37G14903 Striga asiatica HOM05D003449 ORTHO05D004133 1.1e-09 67.4 80 50.0
Aqoxy4G00018 Aquilegia oxysepala HOM05D003449 ORTHO05D004133 1.4e-09 67.0 51 64.7
PSO675G3785 Papaver somniferum HOM05D003449 ORTHO05D004133 1.8e-09 66.6 83 48.2
FAN23G2573 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.4e-09 66.2 156 39.1
SEGI_19112 Sequoiadendron giganteum HOM05D003449 ORTHO05D004133 3.1e-09 65.9 54 57.4
MD02G1000300 Malus domestica HOM05D003449 ORTHO05D004133 5.3e-09 65.1 37 78.4
Solyc12g096600.2 Solanum lycopersicum HOM05D003449 ORTHO05D004133 2.0e-08 63.2 56 57.1
HPP92_007025 Vanilla planifolia HOM05D003449 ORTHO05D004133 2.0e-08 63.2 47 55.3
Pp3c4_17510 Physcomitrium patens HOM05D003449 ORTHO05D004133 1.0e-07 60.8 54 51.9
vmacro17029 Vaccinium macrocarpon HOM05D003449 ORTHO05D004133 1.0e-07 60.8 127 33.9
CARHR125540 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.3e-07 60.5 69 49.3
SMO364G0163 Selaginella moellendorffii HOM05D003449 ORTHO05D004133 1.7e-07 60.1 53 54.7
Nitab4.5_0001110g0060 Nicotiana tabacum HOM05D003449 ORTHO05D004133 6.5e-07 58.2 36 72.2
Oeu050305.2 Olea europaea HOM05D003449 ORTHO05D004133 1.1e-06 57.4 120 35.8
DCAR_011557 Daucus carota HOM05D003449 ORTHO05D004133 1.9e-06 56.6 40 67.5
CBR_g41704 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-06 55.8 80 42.5
ClCG06G009820 Citrullus lanatus HOM05D003449 ORTHO05D004133 4.2e-06 55.5 35 71.4


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