Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G0780 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.1e-107 390.2 190 100.0
FAN24G2067 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.9e-59 233.0 152 80.3
FAN14G0405 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.4e-59 231.5 123 94.3
FvH4_7g00320 Fragaria vesca HOM05D000034 ORTHO05D000277 1.6e-58 229.9 152 80.9
FAN22G1985 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.1e-54 217.2 152 77.0
FvH4_1g22560 Fragaria vesca HOM05D000034 ORTHO05D000037 4.9e-52 208.4 143 76.9
FAN25G0666 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.4e-51 204.9 167 67.7
FAN25G0710 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.4e-51 204.9 167 67.7
FAN12G3067 Fragaria x ananassa HOM05D000034 ORTHO05D000277 8.7e-49 197.6 152 74.3
FAN28G1917 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.1e-48 197.2 154 68.8
FAN03G2645 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.6e-47 192.2 146 76.0
FvH4_7g11552 Fragaria vesca HOM05D000034 ORTHO05D000277 2.6e-45 186.0 146 73.3
FAN11G0226 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.6e-45 186.0 146 73.3
FAN21G1005 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.9e-44 182.6 159 68.6
FAN20G0414 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.2e-42 177.2 125 78.4
FvH4_6g09145 Fragaria vesca HOM05D000034 ORTHO05D000277 1.6e-42 176.8 100 94.0
FAN24G1441 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.1e-42 176.4 127 78.0
FAN05G0075 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.3e-41 172.9 146 67.8
FAN12G0701 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-37 160.2 146 65.8
RcHm_v2.0_Chr1g0373591 Rosa chinensis HOM05D000034 ORTHO05D000277 3.4e-37 159.1 151 55.0
FvH4_2g04031 Fragaria vesca HOM05D000034 ORTHO05D000277 6.5e-36 154.8 160 50.6
FvH4_1g18411 Fragaria vesca HOM05D000034 ORTHO05D000277 8.4e-36 154.5 160 50.6
FAN09G3387 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.2e-34 150.6 121 66.9
FAN25G0466 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.5e-34 149.1 153 51.6
FAN02G0050 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.9e-34 147.9 138 64.5
FAN22G0450 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.9e-34 147.9 138 64.5
FAN02G4058 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.3e-33 146.4 119 71.4
FAN08G2368 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.3e-33 146.4 138 63.8
FAN09G0335 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.1e-33 145.2 161 49.7
FAN28G1335 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.1e-33 145.2 147 61.9
FAN21G2311 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.7e-32 141.7 92 77.2
FAN20G1514 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-31 140.6 154 53.9
FvH4_1g24290 Fragaria vesca HOM05D000034 ORTHO05D000277 6.9e-30 134.8 97 80.4
FAN05G4941 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.0e-30 134.4 83 89.2
FAN04G3245 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-29 133.7 156 48.7
FAN17G0070 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.0e-29 133.3 160 46.9
FvH4_4g15171 Fragaria vesca HOM05D000034 ORTHO05D000277 2.6e-29 132.9 146 56.8
FAN26G0732 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.0e-28 128.6 152 50.0
FAN13G2412 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.2e-27 125.6 150 49.3
FvH4_2g09412 Fragaria vesca HOM05D000034 ORTHO05D000277 2.1e-26 123.2 146 54.8
FAN15G3165 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.7e-25 118.2 152 47.4
FAN08G3309 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-23 114.0 151 46.4
FAN08G3130 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.8e-23 112.1 78 79.5
FAN02G4017 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.1e-22 109.4 122 50.8
MD10G1011200 Malus domestica HOM05D000034 ORTHO05D000277 4.1e-22 109.0 174 43.7
FAN06G3685 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-21 107.1 98 67.3
CANSAT11G0741 Cannabis sativa HOM05D000034 ORTHO05D000277 5.9e-21 105.1 153 42.5
FvH4_4g09541 Fragaria vesca HOM05D000034 ORTHO05D000277 7.7e-21 104.8 133 43.6
CANSAT21G0305 Cannabis sativa HOM05D000034 ORTHO05D000277 5.0e-20 102.1 153 41.8
CANSAT25G0805 Cannabis sativa HOM05D000034 ORTHO05D000277 1.1e-19 100.9 153 40.5
FAN17G1994 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.1e-19 100.9 64 75.0
FvH4_3g15552 Fragaria vesca HOM05D000034 ORTHO05D000277 2.5e-19 99.8 90 65.6
FAN20G2099 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.1e-18 96.7 139 50.4
FvH4_3g30720 Fragaria vesca HOM05D000034 ORTHO05D000277 5.1e-17 92.0 87 55.2
FAN21G0385 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.1e-17 92.0 123 44.7
FvH4_2g07610 Fragaria vesca HOM05D000034 ORTHO05D000277 6.7e-17 91.7 87 55.2
FAN09G4862 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-16 90.5 81 66.7
FAN08G2078 Fragaria x ananassa HOM05D011794 ORTHO05D000277 5.7e-16 88.6 146 41.8
CANSAT64G1464 Cannabis sativa HOM05D000034 ORTHO05D000277 1.3e-15 87.4 73 54.8
FAN20G2803 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-15 87.4 133 43.6
FAN11G4007 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.7e-15 87.0 63 71.4
FAN08G2786 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.8e-15 85.5 68 54.4
Atru.chr2.2599 Acer truncatum HOM05D000034 ORTHO05D000277 1.1e-14 84.3 118 44.1
FAN17G0186 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.1e-14 82.4 139 41.7
RcHm_v2.0_Chr7g0219611 Rosa chinensis HOM05D000034 ORTHO05D000277 9.1e-14 81.3 84 60.7
Atru.chr6.1585 Acer truncatum HOM05D000034 ORTHO05D000277 1.2e-13 80.9 128 38.3
FAN26G3355 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.8e-12 75.9 98 40.8
RcHm_v2.0_Chr2g0106711 Rosa chinensis HOM05D000034 ORTHO05D025609 6.5e-12 75.1 151 31.8
FvH4_2g04811 Fragaria vesca HOM05D000034 ORTHO05D000277 8.5e-12 74.7 135 39.3
FAN19G1412 Fragaria x ananassa HOM05D002788 ORTHO05D025609 8.5e-12 74.7 113 38.1
MD15G1289200 Malus domestica HOM05D000034 ORTHO05D000277 1.1e-11 74.3 138 32.6
FAN28G0140 Fragaria x ananassa HOM05D002788 ORTHO05D025609 2.5e-11 73.2 118 37.3
FAN28G0483 Fragaria x ananassa HOM05D002788 ORTHO05D025609 3.2e-11 72.8 118 37.3
FAN16G1617 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.5e-11 72.0 166 31.3
FAN17G0198 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.2e-11 71.6 63 61.9
FAN03G2701 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.4e-11 71.2 86 44.2
FAN04G3119 Fragaria x ananassa HOM05D000034 ORTHO05D026272 3.6e-10 69.3 88 44.3
FAN21G1928 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.1e-09 65.5 40 85.0
FAN26G2222 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.1e-09 65.5 43 88.4
Hma1.2p1_0489F.1_g164000 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-08 63.9 170 29.4
Hma1.2p1_0664F.1_g199003 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-08 63.9 158 27.2
Hma1.2p1_0423F.1_g150230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-08 62.8 164 28.7
TWI59G1350 Tripterygium wilfordii HOM05D000034 ORTHO05D000277 3.3e-08 62.8 163 28.8
FAN16G3514 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.4e-08 62.4 95 37.9
Actinidia17901 Actinidia chinensis HOM05D000034 ORTHO05D000277 7.4e-08 61.6 124 35.5
Hma1.2p1_0081F.1_g042220 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-08 61.6 164 28.7
Lsat_1_v5_gn_7_34221 Lactuca sativa HOM05D000034 ORTHO05D000277 1.3e-07 60.8 138 31.9
Lsat_1_v5_gn_4_94201 Lactuca sativa HOM05D000034 ORTHO05D000277 1.7e-07 60.5 138 31.9
QL01p014514 Quercus lobata HOM05D000034 ORTHO05D000277 6.3e-07 58.5 124 33.1
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-06 57.8 73 41.1
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-06 57.4 75 40.0
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-06 57.0 73 41.1
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.0 154 25.3
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.0 154 25.3
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.0 154 25.3
Lj1g0021510 Lotus japonicus HOM05D000034 ORTHO05D000277 2.4e-06 56.6 159 26.4
Actinidia33028 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.1e-06 55.8 148 29.7
CSS0037415 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.1e-06 55.8 73 41.1
HanXRQChr09g0256181 Helianthus annuus HOM05D000034 ORTHO05D000277 5.3e-06 55.5 139 32.4
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.3e-06 55.5 154 24.7
FAN08G2713 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.0e-06 55.1 142 27.5
Lsat_1_v5_gn_6_55620 Lactuca sativa HOM05D000034 ORTHO05D000277 7.0e-06 55.1 47 48.9
Lj6g0017267 Lotus japonicus HOM05D000034 ORTHO05D000277 7.0e-06 55.1 167 29.3
CSS0013775 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 9.1e-06 54.7 98 36.7
FAN13G2115 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.1e-06 54.7 31 67.7
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.1e-06 54.7 154 24.7


User provided reference genes

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