Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 6.9e-170 600.5 297 100.0
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 2.1e-166 589.0 299 97.7
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 4.7e-166 587.8 299 97.3
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 2.3e-149 532.3 308 86.4
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 1.5e-140 503.1 310 81.3
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 3.7e-139 498.4 304 81.2
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 4.1e-138 495.0 293 81.9
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 2.0e-137 492.7 299 81.6
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.9e-136 488.8 271 84.9
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 2.9e-136 488.8 309 78.3
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.5e-135 485.7 293 79.9
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 3.3e-135 485.3 308 77.9
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 9.5e-135 483.8 302 79.5
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 1.2e-134 483.4 291 82.1
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 1.6e-134 483.0 298 79.9
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 3.6e-134 481.9 270 83.7
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 6.1e-134 481.1 274 90.9
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 1.4e-133 479.9 298 79.5
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 2.3e-133 479.2 305 77.7
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 3.0e-133 478.8 289 80.3
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 3.0e-133 478.8 305 78.4
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 4.0e-133 478.4 292 78.8
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 4.0e-133 478.4 307 77.5
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 1.5e-132 476.5 271 84.9
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 1.5e-132 476.5 301 78.7
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 2.0e-132 476.1 278 82.0
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 2.6e-132 475.7 288 79.9
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 3.4e-132 475.3 301 78.1
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 5.8e-132 474.6 301 78.4
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 7.5e-132 474.2 290 79.3
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 7.5e-132 474.2 270 84.1
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 9.8e-132 473.8 271 82.3
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 1.3e-131 473.4 274 82.8
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 1.3e-131 473.4 273 82.8
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 1.7e-131 473.0 301 77.7
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 2.2e-131 472.6 303 77.9
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 3.7e-131 471.9 269 82.9
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 3.7e-131 471.9 308 77.3
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 3.7e-131 471.9 302 77.8
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 6.4e-131 471.1 254 88.2
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 1.4e-130 469.9 291 78.4
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.9e-130 469.5 255 86.7
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 2.4e-130 469.2 296 78.0
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 5.4e-130 468.0 269 82.5
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 5.4e-130 468.0 255 85.1
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 9.2e-130 467.2 303 76.9
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 1.2e-129 466.8 292 77.7
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 1.6e-129 466.5 306 75.5
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 2.0e-129 466.1 271 81.5
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 3.5e-129 465.3 295 79.3
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 4.6e-129 464.9 271 81.2
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 4.6e-129 464.9 304 75.3
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 4.6e-129 464.9 305 77.0
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 7.8e-129 464.2 264 83.0
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 7.8e-129 464.2 269 81.8
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 1.0e-128 463.8 269 81.8
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 1.3e-128 463.4 305 76.1
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 3.0e-128 462.2 309 75.4
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 3.0e-128 462.2 301 76.1
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 3.9e-128 461.8 302 75.5
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 3.9e-128 461.8 302 75.5
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 3.9e-128 461.8 263 81.7
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 5.0e-128 461.5 306 74.5
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 3.3e-127 458.8 306 73.9
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 3.3e-127 458.8 302 75.2
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 2.8e-126 455.7 292 76.0
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 3.6e-126 455.3 306 75.2
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 3.6e-126 455.3 294 75.9
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 3.6e-126 455.3 294 75.9
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 4.7e-126 454.9 306 75.2
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 4.7e-126 454.9 295 76.9
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 4.7e-126 454.9 270 80.7
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 4.7e-126 454.9 271 80.1
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 8.0e-126 454.1 294 75.5
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 1.1e-125 453.8 268 78.7
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.1e-125 453.8 298 74.8
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 1.1e-125 453.8 280 77.9
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 1.4e-125 453.4 299 74.6
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 3.1e-125 452.2 293 76.5
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 5.2e-125 451.4 272 80.5
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 5.2e-125 451.4 292 76.0
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 5.2e-125 451.4 243 87.2
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 1.5e-124 449.9 294 75.5
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 7.5e-124 447.6 273 78.0
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 1.3e-123 446.8 296 75.3
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 2.2e-123 446.0 293 75.1
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 8.3e-123 444.1 307 70.4
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 8.3e-123 444.1 263 80.2
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 8.3e-123 444.1 273 76.6
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 3.2e-122 442.2 243 84.4
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 3.2e-122 442.2 243 84.4
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 2.7e-121 439.1 291 72.5
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 2.3e-120 436.0 275 76.4
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 9.5e-119 430.6 243 82.7
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 7.5e-116 421.0 309 70.6
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 2.9e-115 419.1 252 78.2
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 3.0e-112 409.1 286 71.3
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 4.2e-106 388.7 219 85.4
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 3.9e-104 382.1 274 66.8
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 1.1e-103 380.6 261 68.2
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 7.3e-103 377.9 259 68.7
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 2.1e-102 376.3 284 62.7
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 3.8e-99 365.5 256 73.8
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 8.4e-99 364.4 256 66.4
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 5.4e-98 361.7 315 58.7
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 3.0e-96 355.9 192 88.0
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 1.5e-95 353.6 190 88.9
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 2.5e-95 352.8 198 86.4
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 1.1e-90 337.4 190 83.2
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 9.3e-90 334.3 192 81.2
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 2.1e-89 333.2 192 80.7
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 2.8e-86 322.8 263 59.7
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 2.4e-85 319.7 236 66.5
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 3.1e-85 319.3 256 60.9
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 3.4e-84 315.8 177 83.6
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 7.6e-84 314.7 187 81.8
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 5.1e-80 302.0 243 58.0
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 9.0e-77 291.2 209 70.8
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 2.0e-68 263.5 188 71.3
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 2.9e-67 259.6 256 52.0
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 9.7e-63 244.6 172 70.9
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 2.6e-60 236.5 259 51.7
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 9.1e-37 158.3 85 85.9
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 2.7e-36 156.8 274 36.9
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 5.9e-36 155.6 135 57.0
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 6.3e-30 135.6 72 86.1
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 1.5e-23 114.4 315 28.6
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 1.8e-21 107.5 65 75.4
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 5.4e-21 105.9 296 31.1
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 6.8e-16 89.0 104 52.9
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 2.6e-15 87.0 72 62.5


User provided reference genes

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