Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G0600 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.3e-95 350.9 164 100.0
FAN09G4274 Fragaria x ananassa HOM05D004840 ORTHO05D005751 5.3e-95 350.9 164 100.0
FvH4_6g06791 Fragaria vesca HOM05D000007 ORTHO05D000039 2.6e-78 295.4 146 95.2
RcHm_v2.0_Chr3g0456131 Rosa chinensis HOM05D000007 ORTHO05D000039 1.5e-65 253.1 145 82.8
RcHm_v2.0_Chr3g0491541 Rosa chinensis HOM05D000007 ORTHO05D000039 1.4e-34 150.2 145 53.1
Prupe.6G319000 Prunus persica HOM05D000007 ORTHO05D000039 3.7e-32 142.1 149 45.6
Prupe.6G319800 Prunus persica HOM05D000007 ORTHO05D000039 4.1e-31 138.7 148 50.0
MD04G1199200 Malus domestica HOM05D000007 ORTHO05D000039 3.5e-30 135.6 142 49.3
RcHm_v2.0_Chr3g0455931 Rosa chinensis HOM05D000007 ORTHO05D000039 4.7e-27 125.2 150 42.7
RcHm_v2.0_Chr3g0456311 Rosa chinensis HOM05D000007 ORTHO05D000039 4.7e-27 125.2 155 44.5
RcHm_v2.0_Chr3g0455991 Rosa chinensis HOM05D000007 ORTHO05D000039 2.3e-26 122.9 149 40.9
RcHm_v2.0_Chr3g0455891 Rosa chinensis HOM05D000007 ORTHO05D000039 3.4e-25 119.0 138 45.7
FvH4_6g06850 Fragaria vesca HOM05D000007 ORTHO05D000039 4.4e-25 118.6 141 44.0
FAN09G0047 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.8e-25 118.2 125 47.2
Prupe.6G319300 Prunus persica HOM05D000007 ORTHO05D000039 7.5e-25 117.9 150 42.7
RcHm_v2.0_Chr6g0279591 Rosa chinensis HOM05D000007 ORTHO05D000039 3.7e-24 115.5 151 45.0
FvH4_6g06690 Fragaria vesca HOM05D000007 ORTHO05D000039 8.3e-24 114.4 135 45.9
RcHm_v2.0_Chr3g0458461 Rosa chinensis HOM05D003032 ORTHO05D003456 1.1e-23 114.0 137 45.3
RcHm_v2.0_Chr2g0123521 Rosa chinensis HOM05D003032 ORTHO05D003456 1.9e-23 113.2 133 43.6
FvH4_6g06663 Fragaria vesca HOM05D000007 ORTHO05D000039 3.2e-23 112.5 134 43.3
FvH4_6g06840 Fragaria vesca HOM05D000007 ORTHO05D000039 3.2e-23 112.5 129 45.7
FvH4_6g06700 Fragaria vesca HOM05D000007 ORTHO05D000039 4.1e-23 112.1 135 42.2
FvH4_5g09390 Fragaria vesca HOM05D003032 ORTHO05D003456 1.2e-22 110.5 134 45.5
FAN18G1730 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.2e-22 110.5 134 45.5
RcHm_v2.0_Chr3g0458451 Rosa chinensis HOM05D003032 ORTHO05D003456 4.6e-22 108.6 133 42.9
RcHm_v2.0_Chr4g0398411 Rosa chinensis HOM05D000007 ORTHO05D000039 4.6e-22 108.6 133 43.6
RcHm_v2.0_Chr3g0457451 Rosa chinensis HOM05D000007 ORTHO05D000039 7.8e-22 107.8 136 39.7
RcHm_v2.0_Chr3g0455861 Rosa chinensis HOM05D000007 ORTHO05D000039 1.3e-21 107.1 144 42.4
FvH4_6g06760 Fragaria vesca HOM05D000007 ORTHO05D000039 2.3e-21 106.3 146 39.7
RcHm_v2.0_Chr3g0457391 Rosa chinensis HOM05D000007 ORTHO05D000039 2.3e-21 106.3 144 39.6
FAN08G1675 Fragaria x ananassa HOM05D003032 ORTHO05D000039 6.6e-21 104.8 149 41.6
RcHm_v2.0_Chr3g0461521 Rosa chinensis HOM05D003032 ORTHO05D003456 8.6e-21 104.4 131 45.8
FvH4_6g06590 Fragaria vesca HOM05D000007 ORTHO05D000039 1.5e-20 103.6 157 39.5
FvH4_5g33841 Fragaria vesca HOM05D003032 ORTHO05D003456 5.6e-20 101.7 149 40.9
FvH4_6g07720 Fragaria vesca HOM05D000007 ORTHO05D000039 5.6e-20 101.7 150 36.7
RcHm_v2.0_Chr2g0110231 Rosa chinensis HOM05D003032 ORTHO05D003456 5.6e-20 101.7 158 41.8
MD15G1167200 Malus domestica HOM05D003032 ORTHO05D003456 7.3e-20 101.3 142 40.1
FAN20G1368 Fragaria x ananassa HOM05D003032 ORTHO05D003456 9.5e-20 100.9 131 45.0
FAN05G0889 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-19 100.1 157 39.5
MD01G1175000 Malus domestica HOM05D003032 ORTHO05D003456 2.8e-19 99.4 131 42.7
RcHm_v2.0_Chr7g0233181 Rosa chinensis HOM05D003032 ORTHO05D000039 3.6e-19 99.0 150 45.3
FAN02G2224 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.2e-19 98.2 141 37.6
RcHm_v2.0_Chr2g0111631 Rosa chinensis HOM05D003032 ORTHO05D003456 6.2e-19 98.2 147 41.5
FAN09G1013 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.1e-19 97.8 141 36.9
FAN14G0234 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.4e-18 97.1 141 36.9
Prupe.8G219300 Prunus persica HOM05D000007 ORTHO05D000039 1.4e-18 97.1 140 41.4
FvH4_6g06630 Fragaria vesca HOM05D000007 ORTHO05D000039 1.8e-18 96.7 141 37.6
FAN14G1928 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.8e-18 96.7 150 35.3
RcHm_v2.0_Chr3g0455781 Rosa chinensis HOM05D000007 ORTHO05D000039 1.8e-18 96.7 132 42.4
FAN14G5073 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.0e-18 95.5 114 41.2
Prupe.8G219500 Prunus persica HOM05D000007 ORTHO05D000039 6.8e-18 94.7 140 40.0
RcHm_v2.0_Chr3g0455831 Rosa chinensis HOM05D000007 ORTHO05D000039 6.8e-18 94.7 128 39.1
RcHm_v2.0_Chr2g0120621 Rosa chinensis HOM05D003032 ORTHO05D003456 1.2e-17 94.0 145 40.0
FvH4_6g06660 Fragaria vesca HOM05D000007 ORTHO05D015662 7.6e-17 91.3 134 38.1
FvH4_1g19120 Fragaria vesca HOM05D003032 ORTHO05D003456 3.8e-16 89.0 133 42.1
FAN02G1364 Fragaria x ananassa HOM05D000007 ORTHO05D015662 8.4e-16 87.8 134 37.3
FvH4_6g06610 Fragaria vesca HOM05D000007 ORTHO05D000039 3.2e-15 85.9 152 32.9
FAN02G0488 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.2e-15 85.9 114 43.9
FAN14G2157 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.2e-15 85.9 152 32.9
FvH4_6g06730 Fragaria vesca HOM05D000007 ORTHO05D000039 4.2e-15 85.5 163 33.1
MD12G1213000 Malus domestica HOM05D000007 ORTHO05D000039 2.1e-14 83.2 133 36.1
Prupe.6G320600 Prunus persica HOM05D000007 ORTHO05D000039 2.1e-14 83.2 131 35.9
MD10G1162500 Malus domestica HOM05D000007 ORTHO05D000039 1.7e-13 80.1 73 50.7
FvH4_6g06801 Fragaria vesca HOM05D000007 ORTHO05D000039 4.3e-12 75.5 74 48.6
FAN05G5754 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.3e-12 75.5 97 37.1
RcHm_v2.0_Chr3g0456291 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-11 73.9 129 31.8
Prupe.6G318300 Prunus persica HOM05D000007 ORTHO05D000039 1.6e-11 73.6 129 31.8
FvH4_6g06790 Fragaria vesca HOM05D000007 ORTHO05D000039 1.1e-10 70.9 165 29.7
FAN14G0731 Fragaria x ananassa HOM05D002144 ORTHO05D002170 1.4e-10 70.5 136 39.0
RcHm_v2.0_Chr6g0259371 Rosa chinensis HOM05D000007 ORTHO05D000039 1.4e-10 70.5 136 30.9
FvH4_6g06831 Fragaria vesca HOM05D000007 ORTHO05D000039 1.8e-10 70.1 136 38.2
FAN14G4334 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.8e-10 70.1 99 43.4
RcHm_v2.0_Chr3g0456241 Rosa chinensis HOM05D000007 ORTHO05D000039 2.4e-10 69.7 133 33.1
MD15G1153400 Malus domestica HOM05D000007 ORTHO05D000039 6.9e-10 68.2 135 36.3
RcHm_v2.0_Chr3g0456251 Rosa chinensis HOM05D000007 ORTHO05D000039 6.9e-10 68.2 130 34.6
CANSAT54G1614 Cannabis sativa HOM05D000007 ORTHO05D000039 9.0e-10 67.8 133 33.8
FAN24G1599 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.0e-10 67.8 138 32.6
RcHm_v2.0_Chr2g0111681 Rosa chinensis HOM05D000007 ORTHO05D000039 9.0e-10 67.8 130 31.5
MD09G1130700 Malus domestica HOM05D000007 ORTHO05D000039 1.2e-09 67.4 135 34.1
SalBow7G4817 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.5e-09 67.0 131 30.5
Prupe.6G316700 Prunus persica HOM05D000007 ORTHO05D000039 2.6e-09 66.2 183 29.0
FAN02G2443 Fragaria x ananassa HOM05D003032 ORTHO05D000039 4.4e-09 65.5 97 40.2
FAN14G0110 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.4e-09 65.5 78 44.9
RcHm_v2.0_Chr6g0262491 Rosa chinensis HOM05D000007 ORTHO05D000039 5.8e-09 65.1 131 31.3
FvH4_6g06670 Fragaria vesca HOM05D000007 ORTHO05D000039 7.6e-09 64.7 130 30.8
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 9.9e-09 64.3 134 31.3
FvH4_1g19141 Fragaria vesca HOM05D000007 ORTHO05D000039 9.9e-09 64.3 80 47.5
CANSAT64G2524 Cannabis sativa HOM05D000007 ORTHO05D000039 1.3e-08 63.9 133 33.1
MD00G1054600 Malus domestica HOM05D000007 ORTHO05D000039 1.3e-08 63.9 153 29.4
RcHm_v2.0_Chr3g0456091 Rosa chinensis HOM05D000007 ORTHO05D000039 1.7e-08 63.5 134 34.3
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.2e-08 63.2 153 29.4
FvH4_6g06820 Fragaria vesca HOM05D000007 ORTHO05D000039 3.8e-08 62.4 134 29.9
FAN08G0362 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.8e-08 62.4 150 28.0
RcHm_v2.0_Chr4g0413511 Rosa chinensis HOM05D000007 ORTHO05D000039 3.8e-08 62.4 128 32.0
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 8.4e-08 61.2 131 29.8
FAN13G2908 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.4e-08 61.2 150 28.0
CSS0017530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.1e-07 60.8 143 27.3
Lj8P116T38 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-07 60.8 132 28.0
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.4e-07 60.5 133 25.6
Hma1.2p1_0178F.1_g078390 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.9e-07 60.1 131 27.5
CsaV3_3G036420 Cucumis sativus L. HOM05D000007 ORTHO05D000039 2.4e-07 59.7 127 31.5
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 3.2e-07 59.3 129 31.8
CiPaw.03G182200 Carya illinoinensis HOM05D000007 ORTHO05D000039 4.2e-07 58.9 136 27.2
MD00G1149800 Malus domestica HOM05D000007 ORTHO05D000039 4.2e-07 58.9 151 29.8
QL03p014472 Quercus lobata HOM05D000007 ORTHO05D000039 4.2e-07 58.9 108 31.5
CANSAT21G1749 Cannabis sativa HOM05D000007 ORTHO05D000039 5.4e-07 58.5 156 29.5
ClCG10G015170 Citrullus lanatus HOM05D000007 ORTHO05D000039 5.4e-07 58.5 132 32.6
CsaV3_3G035370 Cucumis sativus L. HOM05D000007 ORTHO05D000039 5.4e-07 58.5 137 28.5
Dinv06537 Davidia involucrata HOM05D000007 ORTHO05D000039 5.4e-07 58.5 132 28.8
FvH4_2g10221 Fragaria vesca HOM05D000007 ORTHO05D000039 5.4e-07 58.5 138 30.4
Haze_13252 Corylus avellana HOM05D000007 ORTHO05D000039 7.1e-07 58.2 149 26.8
MD17G1255900 Malus domestica HOM05D000007 ORTHO05D000039 7.1e-07 58.2 154 26.0
RcHm_v2.0_Chr2g0110151 Rosa chinensis HOM05D003032 ORTHO05D003456 7.1e-07 58.2 138 34.1
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 9.3e-07 57.8 131 27.5
MD17G1254700 Malus domestica HOM05D000007 ORTHO05D000039 9.3e-07 57.8 157 28.7
RcHm_v2.0_Chr3g0456171 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-06 57.4 149 30.9
CsaV3_3G036560 Cucumis sativus L. HOM05D000007 ORTHO05D000039 1.6e-06 57.0 138 26.8
QL07p003134 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-06 57.0 130 26.9
ClCG10G019730 Citrullus lanatus HOM05D023299 ORTHO05D000039 2.1e-06 56.6 113 35.4
Cc05_g08700 Coffea canephora HOM05D000007 ORTHO05D000039 2.1e-06 56.6 135 25.9
FvH4_2g25660 Fragaria vesca HOM05D000007 ORTHO05D000039 2.1e-06 56.6 134 30.6
QL07p003114 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 56.6 133 27.1
MSTRG.6523 Avicennia marina HOM05D000007 ORTHO05D000039 2.7e-06 56.2 82 34.1
Dinv05295 Davidia involucrata HOM05D000007 ORTHO05D000039 2.7e-06 56.2 128 32.0
MD17G1251300 Malus domestica HOM05D000007 ORTHO05D000039 2.7e-06 56.2 145 29.7
MD17G1253700 Malus domestica HOM05D000007 ORTHO05D000039 2.7e-06 56.2 155 32.3
MELO3C009862.2 Cucumis melo HOM05D000007 ORTHO05D000039 3.5e-06 55.8 132 28.8
CsaV3_3G036400 Cucumis sativus L. HOM05D000001 ORTHO05D000039 3.5e-06 55.8 138 27.5
FAN02G3293 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.5e-06 55.8 114 36.8
MD17G1255300 Malus domestica HOM05D000007 ORTHO05D000039 3.5e-06 55.8 145 28.3
CANSAT54G0956 Cannabis sativa HOM05D000007 ORTHO05D000039 4.6e-06 55.5 110 34.5
Duzib264G0052 Durio zibethinus HOM05D000007 ORTHO05D000039 4.6e-06 55.5 130 31.5
FvH4_6g06680 Fragaria vesca HOM05D000007 ORTHO05D000039 4.6e-06 55.5 132 28.0
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 4.6e-06 55.5 132 27.3
CsaV3_3G041390 Cucumis sativus L. HOM05D000007 ORTHO05D000039 6.0e-06 55.1 131 32.1
Dinv16287 Davidia involucrata HOM05D000007 ORTHO05D000039 6.0e-06 55.1 127 29.9
Dinv24453 Davidia involucrata HOM05D000007 ORTHO05D000039 6.0e-06 55.1 150 28.0
MD17G1251900 Malus domestica HOM05D000007 ORTHO05D000039 6.0e-06 55.1 152 28.3


User provided reference genes

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