Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G0400 Fragaria x ananassa HOM05D000009 ORTHO05D025604 2.8e-34 148.3 87 100.0
FAN02G0362 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-20 102.8 58 93.1
FAN09G1611 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-20 102.8 58 93.1
FAN09G2656 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-20 102.8 58 93.1
FAN09G2737 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-20 102.8 58 93.1
FAN02G2931 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.1e-20 100.9 58 91.4
FAN05G1998 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-19 99.8 59 93.2
FAN05G3799 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-19 99.8 59 93.2
FAN05G5574 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-19 99.8 59 93.2
FvH4_6g47980 Fragaria vesca HOM05D000009 ORTHO05D000008 2.5e-19 98.6 58 93.1
FAN02G0409 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.5e-19 98.6 58 91.4
FAN14G3082 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.5e-19 96.7 58 87.9
FAN05G1183 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.2e-18 94.0 56 91.1
FAN23G2591 Fragaria x ananassa HOM05D000009 ORTHO05D025604 6.2e-18 94.0 56 91.1
FAN05G4974 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.1e-17 91.7 56 89.3
FAN09G2088 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.8e-17 90.5 56 85.7
FAN05G0867 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.5e-16 89.4 56 87.5
FAN09G3643 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.8e-16 87.4 56 82.1
RcHm_v2.0_Chr4g0414191 Rosa chinensis HOM05D000009 ORTHO05D000008 2.9e-15 85.1 58 75.9
RcHm_v2.0_Chr4g0414281 Rosa chinensis HOM05D000009 ORTHO05D000008 5.4e-14 80.9 56 75.0
FAN17G0179 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.8e-13 77.0 56 73.2
FvH4_6g47050 Fragaria vesca HOM05D000009 ORTHO05D000008 3.0e-12 75.1 56 71.4
MD05G1243400 Malus domestica HOM05D000009 ORTHO05D000008 3.9e-12 74.7 56 69.6
Prupe.1G159600 Prunus persica HOM05D000009 ORTHO05D000008 1.5e-11 72.8 56 66.1
FvH4_6g48170 Fragaria vesca HOM05D000009 ORTHO05D000008 1.9e-11 72.4 56 69.6
Prupe.3G012000 Prunus persica HOM05D000009 ORTHO05D025604 2.5e-11 72.0 55 67.3
FvH4_6g48310 Fragaria vesca HOM05D000009 ORTHO05D000008 4.3e-11 71.2 57 68.4
FvH4_6g48881 Fragaria vesca HOM05D000009 ORTHO05D000008 4.3e-11 71.2 56 71.4
FAN14G0458 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.6e-11 70.9 56 66.1
RcHm_v2.0_Chr4g0414531 Rosa chinensis HOM05D000009 ORTHO05D000008 9.6e-11 70.1 57 59.6
MD11G1051100 Malus domestica HOM05D000009 ORTHO05D000008 4.8e-10 67.8 57 63.2
Prupe.1G163600 Prunus persica HOM05D000009 ORTHO05D000008 4.8e-10 67.8 57 59.6
MD11G1047000 Malus domestica HOM05D000009 ORTHO05D000008 1.1e-09 66.6 57 63.2
Prupe.1G163700 Prunus persica HOM05D000009 ORTHO05D000008 1.1e-09 66.6 57 59.6
MD03G1054300 Malus domestica HOM05D000009 ORTHO05D000008 1.4e-09 66.2 55 65.5
MD11G1051600 Malus domestica HOM05D000009 ORTHO05D000008 1.4e-09 66.2 57 63.2
MD03G1049100 Malus domestica HOM05D000009 ORTHO05D000008 1.8e-09 65.9 57 61.4
MD11G1054600 Malus domestica HOM05D000009 ORTHO05D000008 1.8e-09 65.9 55 58.2
MD03G1048000 Malus domestica HOM05D000009 ORTHO05D000008 2.4e-09 65.5 48 68.8
MD11G1050800 Malus domestica HOM05D000009 ORTHO05D000008 3.1e-09 65.1 54 59.3
MD11G1055600 Malus domestica HOM05D000009 ORTHO05D025604 3.1e-09 65.1 57 61.4
Prupe.2G067500 Prunus persica HOM05D000009 ORTHO05D000008 3.1e-09 65.1 57 56.1
Sabra13G0113100 Salix brachista HOM05D000009 ORTHO05D000008 9.0e-09 63.5 57 57.9
Sabra13G0109100 Salix brachista HOM05D000009 ORTHO05D000008 2.0e-08 62.4 57 59.6
RcHm_v2.0_Chr2g0107631 Rosa chinensis HOM05D000009 ORTHO05D000008 3.4e-08 61.6 52 59.6
Sabra13G0108600 Salix brachista HOM05D000009 ORTHO05D000008 3.4e-08 61.6 57 59.6
Sabra13G0109200 Salix brachista HOM05D000009 ORTHO05D000008 3.4e-08 61.6 57 59.6
Sabra13G0109900 Salix brachista HOM05D000009 ORTHO05D000008 3.4e-08 61.6 57 59.6
Sabra13G0110100 Salix brachista HOM05D000009 ORTHO05D000008 3.4e-08 61.6 57 59.6
Sabra13G0109700 Salix brachista HOM05D000009 ORTHO05D000008 4.4e-08 61.2 57 57.9
Sabra14G0004800 Salix brachista HOM05D000009 ORTHO05D000008 5.8e-08 60.8 57 54.4
Potri.003G015500 Populus trichocarpa HOM05D000009 ORTHO05D000008 7.6e-08 60.5 57 56.1
Potri.014G003600 Populus trichocarpa HOM05D000009 ORTHO05D000008 7.6e-08 60.5 58 53.4
Sabra13G0108700 Salix brachista HOM05D000009 ORTHO05D000008 7.6e-08 60.5 57 56.1
Sabra13G0109600 Salix brachista HOM05D000009 ORTHO05D000008 7.6e-08 60.5 57 57.9
Sabra13G0108500 Salix brachista HOM05D000009 ORTHO05D000008 9.9e-08 60.1 57 57.9
Prupe.1G164000 Prunus persica HOM05D000009 ORTHO05D000008 1.3e-07 59.7 52 55.8
MD03G1052500 Malus domestica HOM05D000009 ORTHO05D000008 1.7e-07 59.3 57 54.4
MD11G1056000 Malus domestica HOM05D000009 ORTHO05D000008 1.7e-07 59.3 57 57.9
MD12G1126800 Malus domestica HOM05D000009 ORTHO05D000008 1.7e-07 59.3 53 62.3
Prupe.1G163800 Prunus persica HOM05D000009 ORTHO05D000008 2.2e-07 58.9 55 56.4
Sabra13G0109500 Salix brachista HOM05D000009 ORTHO05D000008 2.2e-07 58.9 57 56.1
Potri.004G170400 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.9e-07 58.5 58 51.7
FAN01G1989 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.8e-07 58.2 52 55.8
FAN06G1503 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.8e-07 58.2 52 55.8
FAN10G3423 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.8e-07 58.2 52 55.8
FAN10G3519 Fragaria x ananassa HOM05D000009 ORTHO05D025604 3.8e-07 58.2 52 55.8
RcHm_v2.0_Chr1g0350501 Rosa chinensis HOM05D000009 ORTHO05D000008 3.8e-07 58.2 52 57.7
Sabra13G0108400 Salix brachista HOM05D000009 ORTHO05D000008 4.9e-07 57.8 57 56.1
Sabra17G0063900 Salix brachista HOM05D000009 ORTHO05D003343 4.9e-07 57.8 57 54.4
Potri.004G169800 Populus trichocarpa HOM05D000009 ORTHO05D000008 8.4e-07 57.0 56 53.6
Potri.014G007600 Populus trichocarpa HOM05D000009 ORTHO05D000008 8.4e-07 57.0 57 56.1
MD12G1127600 Malus domestica HOM05D000009 ORTHO05D000008 1.1e-06 56.6 53 60.4
MD12G1127900 Malus domestica HOM05D000009 ORTHO05D000008 1.1e-06 56.6 53 60.4
Potri.004G170300 Populus trichocarpa HOM05D000009 ORTHO05D000008 1.1e-06 56.6 57 52.6
Sabra14G0000700 Salix brachista HOM05D000009 ORTHO05D000008 1.4e-06 56.2 57 52.6
MD12G1128300 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-06 55.8 49 59.2
FAN05G3394 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-06 55.5 57 57.9
Potri.014G003832 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.4e-06 55.5 56 51.8
Potri.018G135800 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.4e-06 55.5 57 52.6
Prupe.2G111800 Prunus persica HOM05D000009 ORTHO05D000008 2.4e-06 55.5 53 58.5
FAN06G0482 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.2e-06 55.1 52 51.9
Potri.014G005400 Populus trichocarpa HOM05D000009 ORTHO05D000008 4.2e-06 54.7 57 52.6
Prupe.1G011000 Prunus persica HOM05D000009 ORTHO05D000008 4.2e-06 54.7 54 53.7
Potri.014G002900 Populus trichocarpa HOM05D000009 ORTHO05D000008 5.4e-06 54.3 56 51.8
Prupe.1G010700 Prunus persica HOM05D000009 ORTHO05D000008 5.4e-06 54.3 54 53.7
Prupe.2G111700 Prunus persica HOM05D000009 ORTHO05D000008 5.4e-06 54.3 53 58.5
Hma1.2p1_0401F.1_g144820 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.1e-06 53.9 56 51.8
MD02G1059900 Malus domestica HOM05D000009 ORTHO05D000008 7.1e-06 53.9 64 48.4
Prupe.6G243700 Prunus persica HOM05D000009 ORTHO05D000008 7.1e-06 53.9 53 52.8
Hma1.2p1_1404F.1_g281250 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.3e-06 53.5 56 51.8
RcHm_v2.0_Chr4g0422591 Rosa chinensis HOM05D000009 ORTHO05D000008 9.3e-06 53.5 49 61.2
RcHm_v2.0_Chr4g0422651 Rosa chinensis HOM05D000009 ORTHO05D000008 9.3e-06 53.5 49 61.2


User provided reference genes

Program Settings