Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 0.0e+00 1090.5 561 100.0
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 6.5e-302 1040.0 562 96.6
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 8.5e-302 1039.6 579 94.3
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.5e-295 1018.8 581 92.9
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 8.5e-294 1013.1 561 93.8
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.4e-288 995.7 560 93.6
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 5.0e-262 907.5 561 83.6
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 1.1e-261 906.4 562 83.6
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 7.5e-250 867.1 558 80.3
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 1.7e-246 855.9 561 78.1
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 6.6e-246 854.0 561 77.4
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 5.6e-245 850.9 568 78.9
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.6e-242 842.0 557 77.0
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 4.1e-240 834.7 561 75.9
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 9.2e-240 833.6 561 75.9
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 3.5e-239 831.6 560 75.9
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 5.1e-238 827.8 561 75.0
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 5.1e-238 827.8 561 75.2
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.1e-237 826.6 561 75.4
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.5e-237 826.2 561 75.2
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 3.3e-237 825.1 557 75.2
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 5.6e-237 824.3 562 76.3
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 2.8e-236 822.0 557 75.4
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.8e-235 819.3 557 75.0
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 4.0e-235 818.1 557 76.1
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 8.9e-235 817.0 558 75.4
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 8.9e-235 817.0 558 75.4
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 4.4e-234 814.7 575 72.5
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 5.8e-234 814.3 559 74.4
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 7.6e-234 813.9 558 75.3
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 9.9e-234 813.5 562 74.2
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 1.3e-233 813.1 560 74.5
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 1.7e-233 812.8 562 74.9
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 6.4e-233 810.8 557 75.2
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 5.4e-232 807.7 558 74.7
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 2.7e-231 805.4 561 73.8
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 6.0e-231 804.3 561 74.3
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 7.8e-231 803.9 560 74.5
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 1.3e-230 803.1 558 74.0
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 1.7e-230 802.7 562 74.6
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 8.6e-230 800.4 563 74.1
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 8.6e-230 800.4 558 74.7
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 2.1e-228 795.8 561 73.3
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 3.6e-228 795.0 561 74.2
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 3.6e-228 795.0 561 72.9
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 4.7e-228 794.7 557 74.0
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 3.1e-227 792.0 558 73.5
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 5.2e-227 791.2 537 76.2
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 5.2e-227 791.2 562 74.0
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 5.2e-227 791.2 563 73.9
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 5.2e-227 791.2 561 72.5
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 1.2e-226 790.0 561 71.7
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 1.7e-225 786.2 557 72.4
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 2.2e-225 785.8 561 71.1
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 3.2e-224 781.9 562 72.8
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 5.4e-224 781.2 561 71.8
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 5.4e-224 781.2 588 68.9
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 7.1e-224 780.8 561 71.3
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 9.3e-224 780.4 560 70.4
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 7.8e-223 777.3 559 72.3
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 2.3e-222 775.8 558 72.4
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 3.3e-221 771.9 570 71.2
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 1.5e-218 763.1 557 71.3
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 1.5e-218 763.1 578 70.6
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 3.4e-218 761.9 557 71.1
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 4.4e-218 761.5 589 67.7
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 7.6e-218 760.8 581 68.7
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 9.9e-218 760.4 562 69.9
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 1.7e-217 759.6 510 75.1
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 4.9e-217 758.1 562 70.1
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.9e-216 756.1 541 73.6
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 5.4e-216 754.6 562 69.9
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 1.6e-215 753.1 562 69.6
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.1e-215 752.7 557 70.6
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.1e-215 752.7 561 70.1
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 2.5e-213 745.7 561 69.0
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 5.6e-213 744.6 562 70.1
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 6.9e-211 737.6 564 68.6
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 7.6e-210 734.2 562 68.3
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.9e-209 732.3 563 68.4
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 2.9e-209 732.3 568 69.5
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 8.4e-209 730.7 556 68.2
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 8.4e-209 730.7 519 73.2
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 1.9e-208 729.6 564 67.7
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 3.2e-208 728.8 561 68.3
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 4.2e-208 728.4 538 71.0
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 1.2e-207 726.9 559 66.5
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 1.6e-207 726.5 500 75.2
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 2.7e-207 725.7 562 66.9
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 1.0e-206 723.8 558 67.6
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 4.3e-205 718.4 559 68.0
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 2.8e-204 715.7 557 66.8
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 3.1e-203 712.2 559 65.8
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 3.4e-202 708.8 561 64.7
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 5.8e-202 708.0 561 64.3
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 5.8e-202 708.0 495 73.5
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 1.6e-199 699.9 561 64.2
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 2.1e-199 699.5 561 64.0
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 6.0e-199 698.0 562 63.9
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 2.3e-198 696.0 499 71.9
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 3.1e-195 685.6 561 64.2
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 2.0e-194 682.9 560 64.5
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 2.6e-194 682.6 561 63.8
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 2.2e-193 679.5 562 63.7
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 2.2e-193 679.5 562 63.7
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 5.7e-189 664.8 550 63.5
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 4.8e-188 661.8 498 68.5
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 1.5e-186 656.8 546 64.3
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 7.2e-184 647.9 538 60.8
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 7.2e-184 647.9 552 61.1
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 2.4e-179 632.9 428 75.5
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 4.2e-176 622.1 509 65.0
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 5.7e-173 611.7 563 58.8
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 2.7e-167 592.8 448 68.8
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 2.7e-159 566.2 566 54.1
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 1.9e-152 543.5 397 72.0
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 7.5e-149 531.6 562 53.7
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 7.0e-147 525.0 450 62.2
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 7.7e-146 521.5 363 74.9
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 1.7e-145 520.4 570 51.4
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 1.1e-144 517.7 406 64.8
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 6.8e-142 508.4 566 50.9
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 3.4e-141 506.1 539 51.6
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 4.6e-130 469.2 415 62.2
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 1.2e-117 427.9 294 75.5
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 1.9e-112 410.6 570 46.7
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 3.6e-111 406.4 542 45.6
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 2.4e-107 393.7 569 42.7
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 3.5e-106 389.8 279 71.7
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 1.4e-102 377.9 542 44.1
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 8.2e-79 298.9 206 73.3
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 6.1e-74 282.7 491 39.3
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 6.7e-73 279.3 377 48.8
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 4.2e-51 206.8 142 73.9
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 2.3e-49 201.1 283 42.0
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 1.7e-47 194.9 142 71.8
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 1.2e-40 172.2 198 53.0
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 2.2e-39 167.9 111 72.1
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 8.3e-39 166.0 149 55.7
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 8.3e-39 166.0 292 39.7
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 3.6e-34 150.6 114 68.4
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.8e-31 141.0 88 81.8
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 2.0e-29 134.8 103 68.0
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 6.8e-25 119.8 133 51.9
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 1.1e-22 112.5 85 65.9
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 1.2e-21 109.0 77 71.4
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 3.9e-20 104.0 87 62.1
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 7.3e-19 99.8 204 35.8
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 2.3e-17 94.7 88 59.1
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 7.5e-16 89.7 73 60.3


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