Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3565 Fragaria x ananassa HOM05D000457 ORTHO05D000560 7.5e-30 133.3 71 100.0
FAN04G3136 Fragaria x ananassa HOM05D000457 ORTHO05D000560 6.6e-26 120.2 69 92.8
FAN13G1109 Fragaria x ananassa HOM05D000457 ORTHO05D000560 6.6e-26 120.2 69 92.8
FvH4_5g06130 Fragaria vesca HOM05D000457 ORTHO05D000560 1.1e-25 119.4 69 92.8
FAN18G0992 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.1e-25 119.4 69 92.8
RcHm_v2.0_Chr7g0192681 Rosa chinensis HOM05D000457 ORTHO05D000560 2.8e-24 114.8 69 88.4
MD06G1166400 Malus domestica HOM05D000457 ORTHO05D000560 5.6e-17 90.5 69 68.1
Lj4g0023607 Lotus japonicus HOM05D000457 ORTHO05D000560 1.6e-16 89.0 60 75.0
CiPaw.11G021300 Carya illinoinensis HOM05D000457 ORTHO05D000560 3.6e-16 87.8 62 71.0
Sabra15G0106700 Salix brachista HOM05D000457 ORTHO05D000560 8.1e-16 86.7 62 71.0
Potri.012G084800 Populus trichocarpa HOM05D000457 ORTHO05D000560 1.1e-15 86.3 60 71.7
Sabra12G0061000 Salix brachista HOM05D000457 ORTHO05D000560 1.4e-15 85.9 60 71.7
COL.COLO4_05566 Corchorus olitorius HOM05D000457 ORTHO05D000560 2.3e-15 85.1 60 68.3
Potri.015G083200 Populus trichocarpa HOM05D000457 ORTHO05D000560 2.3e-15 85.1 60 71.7
Medtr4g105080 Medicago truncatula HOM05D000457 ORTHO05D000560 4.0e-15 84.3 54 75.9
TPR.G37563 Trifolium pratense HOM05D000457 ORTHO05D000560 5.2e-15 84.0 54 77.8
Duzib068G0925 Durio zibethinus HOM05D000457 ORTHO05D000560 6.8e-15 83.6 60 70.0
Lalb_Chr13g0297631 Lupinus albus HOM05D000457 ORTHO05D000560 6.8e-15 83.6 54 75.9
arahy.Tifrunner.gnm1.ann1.425GF3 Arachis hypogaea HOM05D000457 ORTHO05D000560 1.2e-14 82.8 53 77.4
Thecc.03G020000 Theobroma cacao HOM05D000457 ORTHO05D000560 1.5e-14 82.4 60 70.0
VMungo1215G1831 Vigna mungo HOM05D000457 ORTHO05D000560 2.0e-14 82.0 53 79.2
Cfa019207 Carpinus fangiana HOM05D000457 ORTHO05D000560 3.4e-14 81.3 62 64.5
CSS0045660 Camellia sinensis var. sinensis HOM05D000457 ORTHO05D000560 5.8e-14 80.5 62 62.9
Haze_07577 Corylus avellana HOM05D000457 ORTHO05D000560 9.9e-14 79.7 56 69.6
Manes.06G109600 Manihot esculenta HOM05D000457 ORTHO05D000560 9.9e-14 79.7 67 61.2
ECA246G3664 Erigeron canadensis HOM05D000457 ORTHO05D000560 1.3e-13 79.3 60 53.3
Gorai.009G267500 Gossypium raimondii HOM05D000457 ORTHO05D000560 2.2e-13 78.6 60 66.7
QL10p007271 Quercus lobata HOM05D000457 ORTHO05D000560 2.9e-13 78.2 54 70.4
Ciclev10019061m.g Citrus clementina HOM05D000457 ORTHO05D000560 3.7e-13 77.8 69 56.5
Cpa.g.sc110.3 Carica papaya HOM05D000457 ORTHO05D000560 4.9e-13 77.4 69 56.5
Glyma.17G085100 Glycine max HOM05D000457 ORTHO05D000560 4.9e-13 77.4 53 73.6
Gohir.A05G254200 Gossypium hirsutum HOM05D000457 ORTHO05D000560 4.9e-13 77.4 60 65.0
Psat0s2493g0120 Pisum sativum HOM05D000457 ORTHO05D000560 4.9e-13 77.4 54 72.2
Atru.chr9.2562 Acer truncatum HOM05D000457 ORTHO05D000560 6.4e-13 77.0 70 57.1
DCAR_026171 Daucus carota HOM05D000457 ORTHO05D000560 6.4e-13 77.0 68 54.4
Dinv38538 Davidia involucrata HOM05D000457 ORTHO05D000560 6.4e-13 77.0 53 67.9
vmacro19311 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 8.3e-13 76.6 67 59.7
Hma1.2p1_0046F.1_g027050 Hydrangea macrophylla HOM05D000457 ORTHO05D000560 1.4e-12 75.9 60 61.7
Peaxi162Scf00089g01433 Petunia axillaris HOM05D000457 ORTHO05D000560 1.4e-12 75.9 61 60.7
Solyc03g112320.4 Solanum lycopersicum HOM05D000457 ORTHO05D000560 1.4e-12 75.9 67 58.2
Sopen03g031420 Solanum pennellii HOM05D000457 ORTHO05D000560 1.4e-12 75.9 67 58.2
PGSC0003DMG400018114 Solanum tuberosum HOM05D000457 ORTHO05D000560 2.4e-12 75.1 67 58.2
CSS0000374 Camellia sinensis var. sinensis HOM05D000457 ORTHO05D000560 4.1e-12 74.3 62 58.1
Lsat_1_v5_gn_5_14180 Lactuca sativa HOM05D000457 ORTHO05D000560 4.1e-12 74.3 62 51.6
MBI11_g05795_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 4.1e-12 74.3 61 55.7
CAN.G338.24 Capsicum annuum HOM05D000457 ORTHO05D000560 7.1e-12 73.6 62 58.1
Oeu036511.1 Olea europaea HOM05D000457 ORTHO05D000560 7.1e-12 73.6 67 55.2
Phvul.003G204400 Phaseolus vulgaris HOM05D000457 ORTHO05D000560 9.2e-12 73.2 53 67.9
GSVIVG01007662001 Vitis vinifera HOM05D000457 ORTHO05D000560 9.2e-12 73.2 59 61.0
Nitab4.5_0001793g0150 Nicotiana tabacum HOM05D000457 ORTHO05D000560 1.2e-11 72.8 60 61.7
Rhsim11G0055800 Rhododendron simsii HOM05D000457 ORTHO05D000560 1.2e-11 72.8 53 62.3
ClCG06G001970 Citrullus lanatus HOM05D000457 ORTHO05D000560 2.1e-11 72.0 53 66.0
HanXRQChr05g0155311 Helianthus annuus HOM05D000457 ORTHO05D000560 2.1e-11 72.0 56 50.0
Cc04_g11700 Coffea canephora HOM05D000457 ORTHO05D000560 2.7e-11 71.6 59 57.6
Nitab4.5_0003703g0010 Nicotiana tabacum HOM05D000457 ORTHO05D000560 2.7e-11 71.6 62 58.1
Aa31sc137G30 Aethionema arabicum HOM05D000457 ORTHO05D000560 4.6e-11 70.9 53 60.4
Carub.0008s1016 Capsella rubella HOM05D000457 ORTHO05D000560 6.0e-11 70.5 61 54.1
Sed0027604 Sechium edule HOM05D000457 ORTHO05D000560 6.0e-11 70.5 53 66.0
AL8G24170 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 7.8e-11 70.1 61 54.1
BraA09t38955Z Brassica rapa HOM05D000457 ORTHO05D000560 7.8e-11 70.1 61 52.5
CARHR258480 Cardamine hirsuta HOM05D000457 ORTHO05D000560 7.8e-11 70.1 61 52.5
MELO3C022332.2 Cucumis melo HOM05D000457 ORTHO05D000560 7.8e-11 70.1 53 64.2
TAR374G1263 Trochodendron aralioides HOM05D000457 ORTHO05D000560 7.8e-11 70.1 57 59.6
Sp6g12210 Schrenkiella parvula HOM05D000457 ORTHO05D000560 1.0e-10 69.7 61 52.5
Thhalv10012790m.g Eutrema salsugineum HOM05D000457 ORTHO05D000560 1.7e-10 68.9 61 52.5
THA.LOC104809245 Tarenaya hassleriana HOM05D000457 ORTHO05D000560 1.7e-10 68.9 53 58.5
BcaB07g32872 Brassica carinata HOM05D000457 ORTHO05D000560 2.3e-10 68.6 61 52.5
PGR044G2752 Punica granatum HOM05D000457 ORTHO05D000560 3.0e-10 68.2 61 54.1
TAR629G2156 Trochodendron aralioides HOM05D000457 ORTHO05D000560 3.0e-10 68.2 59 57.6
C05p31510 Brassica napus HOM05D000457 ORTHO05D000560 1.1e-09 66.2 61 50.8
BcaC05g27236 Brassica carinata HOM05D000457 ORTHO05D000560 1.5e-09 65.9 61 50.8
BolC5t31875H Brassica oleracea HOM05D000457 ORTHO05D000560 1.5e-09 65.9 61 50.8
TWI23G0156 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 1.5e-09 65.9 54 53.7
EL10Ac5g10664 Beta vulgaris HOM05D000457 ORTHO05D000560 1.9e-09 65.5 69 49.3
AUR62028734 Chenopodium quinoa HOM05D000457 ORTHO05D000560 1.9e-09 65.5 60 48.3
Sc04g0001560 Simmondsia chinensis HOM05D000457 ORTHO05D000560 2.5e-09 65.1 62 53.2
Migut.O00149 Erythranthe guttata HOM05D000457 ORTHO05D000560 4.3e-09 64.3 68 50.0
Aqoxy5G03764 Aquilegia oxysepala HOM05D000457 ORTHO05D000560 7.3e-09 63.5 57 49.1
Nn4g22619 Nelumbo nucifera HOM05D000457 ORTHO05D000560 7.3e-09 63.5 57 56.1
Lj9C443T18 Lonicera japonica HOM05D000457 ORTHO05D000560 1.6e-08 62.4 50 62.0
Hund02780 Selenicereus undatus HOM05D000457 ORTHO05D000560 1.6e-08 62.4 58 51.7
AUR62008153 Chenopodium quinoa HOM05D000457 ORTHO05D000560 2.8e-08 61.6 60 46.7
SalBow5G1937 Salvia bowleyana HOM05D000457 ORTHO05D000560 2.8e-08 61.6 56 51.8
Ah.02g110680 Amaranthus hybridus HOM05D000457 ORTHO05D000560 6.2e-08 60.5 59 42.4
PSO782G4475 Papaver somniferum HOM05D000457 ORTHO05D000560 6.2e-08 60.5 57 45.6
SalBow5G3767 Salvia bowleyana HOM05D000457 ORTHO05D000560 8.1e-08 60.1 56 50.0
Eucgr.K02803 Eucalyptus grandis HOM05D000457 ORTHO05D000560 1.1e-07 59.7 57 49.1
PSO111G0031 Papaver somniferum HOM05D000457 ORTHO05D000560 1.4e-07 59.3 57 49.1
HPP92_021379 Vanilla planifolia HOM05D000457 ORTHO05D000560 5.8e-06 53.9 61 41.0


User provided reference genes

Program Settings