Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3534 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.9e-218 761.5 370 100.0
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.6e-99 367.1 301 66.4
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 8.8e-98 361.3 301 66.4
FvH4_3g02850 Fragaria vesca HOM05D000096 ORTHO05D000045 4.1e-71 272.7 301 49.2
FAN14G0272 Fragaria x ananassa HOM05D024601 ORTHO05D025393 2.0e-57 227.3 108 99.1
FAN01G0657 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.2e-48 197.2 249 45.4
FAN01G3000 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.2e-48 197.2 249 45.4
FvH4_4g24650 Fragaria vesca HOM05D007856 ORTHO05D003348 8.4e-48 195.3 182 59.9
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 9.6e-44 181.8 292 36.6
FAN28G2347 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.1e-42 176.8 205 50.2
FAN24G0953 Fragaria x ananassa HOM05D007856 ORTHO05D003348 8.4e-40 168.7 215 44.7
FAN19G0185 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.2e-39 166.4 167 56.3
FAN16G3654 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.0e-37 160.2 205 43.9
FvH4_2g08146 Fragaria vesca HOM05D007856 ORTHO05D003348 3.3e-36 156.8 174 49.4
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 1.8e-34 151.0 295 33.9
FvH4_2g14290 Fragaria vesca HOM05D024601 ORTHO05D025393 2.4e-34 150.6 132 65.2
FAN17G1070 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.9e-34 149.1 137 58.4
FAN15G1310 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.5e-33 146.4 76 92.1
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 1.7e-32 144.4 299 34.1
FAN05G3326 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.7e-30 137.1 95 72.6
FAN20G3088 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.8e-29 134.4 275 31.6
FAN09G1384 Fragaria x ananassa HOM05D000053 ORTHO05D000448 1.5e-28 131.3 232 35.8
FAN05G5829 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.3e-28 130.2 102 67.6
FAN21G1845 Fragaria x ananassa HOM05D007856 ORTHO05D003348 5.3e-26 122.9 96 64.6
FAN12G2535 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.6e-25 120.6 98 59.2
FAN24G2453 Fragaria x ananassa HOM05D024601 ORTHO05D025393 3.4e-25 120.2 75 84.0
FAN22G1481 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.5e-25 119.8 127 52.0
FvH4_2g20781 Fragaria vesca HOM05D007856 ORTHO05D003348 2.2e-24 117.5 91 61.5
FAN28G1495 Fragaria x ananassa HOM05D007856 ORTHO05D003348 9.3e-23 112.1 61 86.9
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 1.2e-22 111.7 296 26.4
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 3.9e-21 106.7 294 27.9
FvH4_6g07961 Fragaria vesca HOM05D007856 ORTHO05D003348 8.2e-19 99.0 63 69.8
FvH4_3g10141 Fragaria vesca HOM05D007856 ORTHO05D003348 5.3e-18 96.3 203 33.0
FvH4_7g08311 Fragaria vesca HOM05D007856 ORTHO05D003348 5.3e-18 96.3 203 33.0
FvH4_7g18891 Fragaria vesca HOM05D007856 ORTHO05D003348 5.3e-18 96.3 203 33.0
RcHm_v2.0_Chr5g0053321 Rosa chinensis HOM05D006849 ORTHO05D003348 9.0e-18 95.5 269 27.9
RcHm_v2.0_Chr5g0066571 Rosa chinensis HOM05D006849 ORTHO05D003348 2.6e-17 94.0 294 26.9
FAN22G1474 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.5e-17 93.2 291 28.9
FAN02G4248 Fragaria x ananassa HOM05D007856 ORTHO05D003348 5.9e-17 92.8 90 46.7
FAN24G1764 Fragaria x ananassa HOM05D007856 ORTHO05D003348 7.7e-17 92.4 153 41.2
FvH4_5g21501 Fragaria vesca HOM05D006849 ORTHO05D003348 1.7e-16 91.3 267 27.3
MD17G1261900 Malus domestica HOM05D007856 ORTHO05D003348 3.8e-16 90.1 88 46.6
FvH4_5g26612 Fragaria vesca HOM05D007856 ORTHO05D003348 5.0e-16 89.7 206 32.0
MD05G1202200 Malus domestica HOM05D007856 ORTHO05D003348 8.5e-16 89.0 88 46.6
FAN24G2510 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.5e-15 87.4 61 63.9
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.2e-15 86.7 260 25.8
FAN24G2379 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.2e-14 85.1 94 45.7
FAN01G2173 Fragaria x ananassa HOM05D030232 ORTHO05D003348 2.1e-14 84.3 79 51.9
RcHm_v2.0_Chr2g0133331 Rosa chinensis HOM05D006849 ORTHO05D003348 2.7e-14 84.0 254 26.0
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 4.6e-14 83.2 261 24.9
FvH4_6g00280 Fragaria vesca HOM05D007856 ORTHO05D003348 3.0e-13 80.5 50 80.0
MD09G1184200 Malus domestica HOM05D007856 ORTHO05D003348 6.7e-13 79.3 112 37.5
FAN16G1404 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.1e-12 78.6 259 24.3
MD09G1016000 Malus domestica HOM05D007856 ORTHO05D003348 2.0e-12 77.8 95 42.1
TWI31G0819 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 2.8e-11 73.9 277 25.6
FAN20G3125 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.8e-11 73.2 233 28.3
FAN12G1343 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.3e-11 72.8 84 42.9
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 6.3e-11 72.8 148 28.4
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.1e-10 72.0 259 22.8
FAN21G0042 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.4e-10 71.6 115 36.5
MD10G1198800 Malus domestica HOM05D007856 ORTHO05D003348 3.1e-10 70.5 88 42.0
FAN10G0022 Fragaria x ananassa HOM05D007856 ORTHO05D003348 9.1e-10 68.9 51 56.9
FvH4_3g35240 Fragaria vesca HOM05D007856 ORTHO05D003348 2.6e-09 67.4 50 58.0
FAN06G1696 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.6e-09 67.4 79 40.5
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 2.6e-09 67.4 195 27.2
MD07G1084700 Malus domestica HOM05D006849 ORTHO05D003348 5.9e-09 66.2 132 32.6
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 5.9e-09 66.2 115 30.4
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 1.0e-08 65.5 270 24.8
FAN10G4353 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.3e-08 65.1 80 38.8
FvH4_7g10871 Fragaria vesca HOM05D007856 ORTHO05D003348 3.8e-08 63.5 84 41.7
RcHm_v2.0_Chr2g0133271 Rosa chinensis HOM05D006849 ORTHO05D003348 3.8e-08 63.5 103 34.0
FAN05G2087 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.5e-08 62.8 105 38.1
FAN15G0248 Fragaria x ananassa HOM05D012050 ORTHO05D011158 6.5e-08 62.8 59 52.5
RcHm_v2.0_Chr7g0212031 Rosa chinensis HOM05D006849 ORTHO05D003348 6.5e-08 62.8 113 32.7
TWI63G1232 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.5e-08 62.8 222 25.2
RcHm_v2.0_Chr4g0413141 Rosa chinensis HOM05D006849 ORTHO05D003348 1.1e-07 62.0 121 28.9
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.4e-07 61.6 156 26.3
MD03G1164900 Malus domestica HOM05D007856 ORTHO05D003348 1.4e-07 61.6 87 34.5
TWI56G0628 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.4e-07 61.6 226 23.5
FvH4_3g14392 Fragaria vesca HOM05D000004 ORTHO05D000002 2.5e-07 60.8 194 23.7
RcHm_v2.0_Chr5g0035621 Rosa chinensis HOM05D006849 ORTHO05D003348 2.5e-07 60.8 123 30.1
DCAR_031642 Daucus carota HOM05D002492 ORTHO05D002621 4.2e-07 60.1 192 26.6
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 5.5e-07 59.7 226 23.0
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 7.2e-07 59.3 202 26.2
MD13G1161500 Malus domestica HOM05D007856 ORTHO05D003348 9.4e-07 58.9 136 25.0
RcHm_v2.0_Chr7g0184001 Rosa chinensis HOM05D006849 ORTHO05D003348 1.2e-06 58.5 75 41.3
TWI63G1000 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.2e-06 58.5 215 24.7
TWI73G0686 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.2e-06 58.5 223 24.7
FAN21G2011 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.1e-06 57.8 128 28.9
MD11G1203900 Malus domestica HOM05D007856 ORTHO05D003348 3.6e-06 57.0 70 41.4
Thecc.04G012000 Theobroma cacao HOM05D000096 ORTHO05D000045 3.6e-06 57.0 300 23.0
TWI60G0328 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 3.6e-06 57.0 222 22.5
FAN23G0061 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.7e-06 56.6 45 60.0
RcHm_v2.0_Chr6g0262741 Rosa chinensis HOM05D006849 ORTHO05D003348 4.7e-06 56.6 123 29.3
FAN14G2538 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.1e-06 56.2 128 28.9
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.1e-06 56.2 242 21.9
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.9e-06 55.8 103 31.1


User provided reference genes

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