Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.1e-271 938.3 447 100.0
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.6e-263 912.1 447 96.9
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.3e-256 887.9 440 95.7
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 8.7e-233 810.1 440 88.9
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.3e-231 806.2 440 87.0
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.2e-218 763.1 440 85.0
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.0e-204 716.8 435 78.9
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 2.6e-189 665.6 431 71.7
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 5.9e-189 664.5 434 73.3
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.0e-188 663.7 438 71.2
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.0e-185 653.7 431 71.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 4.4e-184 648.3 427 70.3
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 5.7e-184 647.9 431 71.2
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 3.7e-183 645.2 437 69.3
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.8e-182 642.9 441 69.2
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 2.4e-182 642.5 427 70.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 2.4e-182 642.5 429 69.9
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 5.3e-182 641.3 406 72.7
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.6e-181 639.8 435 68.0
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.3e-180 636.7 406 73.2
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 2.9e-180 635.6 420 71.7
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 5.0e-180 634.8 435 69.2
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 3.2e-179 632.1 427 69.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 5.5e-179 631.3 407 72.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 9.4e-179 630.6 427 69.6
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.2e-178 630.2 431 68.7
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 4.7e-178 628.2 444 65.8
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 4.7e-178 628.2 436 68.3
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 6.1e-178 627.9 413 70.5
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 2.3e-177 625.9 441 67.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 5.2e-177 624.8 423 68.3
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 5.2e-177 624.8 413 70.9
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.2e-176 623.6 444 66.7
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 7.5e-176 620.9 400 72.0
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 4.8e-175 618.2 399 72.2
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 7.0e-174 614.4 432 66.9
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 7.0e-174 614.4 396 70.7
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 7.0e-174 614.4 430 68.1
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.2e-173 613.6 473 63.0
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 5.0e-172 608.2 427 67.0
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 6.6e-172 607.8 399 70.2
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.1e-171 607.1 410 68.3
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.1e-171 607.1 428 65.2
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.9e-171 606.3 403 69.7
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.9e-171 606.3 419 66.3
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 4.2e-171 605.1 397 69.8
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 7.2e-171 604.4 423 65.2
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 9.5e-171 604.0 424 67.5
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 9.5e-171 604.0 423 66.2
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.6e-170 603.2 424 67.5
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.6e-170 603.2 411 68.9
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.6e-170 603.2 420 66.0
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.1e-170 602.8 424 67.5
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.8e-170 602.4 400 69.5
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.8e-170 602.4 406 67.7
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 3.6e-170 602.1 424 66.7
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 6.1e-170 601.3 407 69.8
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 8.9e-169 597.4 423 65.7
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.0e-168 596.3 427 66.0
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 5.7e-168 594.7 419 66.8
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 8.3e-167 590.9 427 65.3
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 4.1e-166 588.6 424 66.7
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 6.6e-164 581.3 403 67.5
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.9e-163 579.7 441 64.4
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.6e-162 576.6 432 63.2
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.0e-161 572.0 400 68.2
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 2.9e-159 565.8 435 63.2
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 8.3e-159 564.3 407 63.4
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 2.4e-158 562.8 405 62.7
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 5.4e-158 561.6 435 63.2
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 9.2e-158 560.8 445 61.3
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.0e-157 559.7 396 63.6
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.3e-156 557.0 407 62.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 2.9e-151 539.3 427 61.1
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 7.0e-150 534.6 403 63.8
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.6e-146 523.5 391 62.9
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.3e-143 513.8 401 62.3
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 2.2e-143 513.1 403 58.1
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.4e-142 509.6 438 59.1
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.7e-141 506.1 391 63.7
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.8e-138 496.1 391 62.9
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 2.8e-138 496.1 328 71.3
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.4e-137 493.8 425 59.1
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.0e-136 490.0 319 71.5
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 2.6e-136 489.6 326 71.5
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 2.9e-135 486.1 394 57.1
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.4e-135 484.6 381 63.0
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 2.1e-133 479.9 424 54.2
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 4.6e-133 478.8 326 66.3
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.5e-131 473.0 398 56.3
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.6e-125 453.8 309 67.6
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.3e-124 449.9 309 68.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.0e-112 410.2 397 51.4
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 3.1e-105 386.3 228 77.2
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.7e-90 337.4 202 75.7
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.6e-83 313.5 236 65.7
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 6.7e-76 288.9 198 65.2
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.3e-71 274.6 246 57.3
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 9.8e-59 231.9 383 36.6
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.5e-56 223.4 130 80.8
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.5e-56 223.4 130 80.8
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 4.5e-48 196.4 171 54.4
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 2.1e-45 187.6 385 34.0
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 3.1e-36 157.1 161 52.2
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-34 151.8 171 48.5
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-34 151.8 171 48.5
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.2e-34 151.0 137 51.8
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 8.1e-29 132.5 70 85.7
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 6.8e-28 129.4 101 58.4
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 9.6e-22 109.0 63 74.6
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 6.8e-20 102.8 76 63.2
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 9.3e-17 92.4 201 31.8
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.3e-15 88.6 207 30.4
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 2.3e-15 87.8 207 31.9
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 3.0e-15 87.4 548 20.4
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 7.6e-11 72.8 75 45.3
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.9e-06 58.2 77 37.7


User provided reference genes

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