Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3386 Fragaria x ananassa HOM05D000287 ORTHO05D046581 2.1e-46 188.7 97 100.0
FvH4_5g18260 Fragaria vesca HOM05D000287 ORTHO05D000319 8.7e-37 156.8 93 90.3
FAN18G0821 Fragaria x ananassa HOM05D000287 ORTHO05D046581 8.7e-37 156.8 93 90.3
FAN13G1931 Fragaria x ananassa HOM05D000287 ORTHO05D209896 1.9e-31 139.0 93 80.6
FvH4_5g29490 Fragaria vesca HOM05D000287 ORTHO05D000319 4.3e-28 127.9 94 75.5
RcHm_v2.0_Chr7g0177321 Rosa chinensis HOM05D000287 ORTHO05D000319 1.5e-25 119.4 93 73.1
FAN04G0727 Fragaria x ananassa HOM05D000287 ORTHO05D000319 3.1e-18 95.1 56 89.3
RcHm_v2.0_Chr5g0024791 Rosa chinensis HOM05D000287 ORTHO05D000319 1.6e-14 82.8 94 53.2
FAN25G1249 Fragaria x ananassa HOM05D000287 ORTHO05D000319 2.7e-14 82.0 97 49.5
FvH4_3g15030 Fragaria vesca HOM05D000287 ORTHO05D000319 6.0e-14 80.9 93 50.5
RcHm_v2.0_Chr1g0325391 Rosa chinensis HOM05D000287 ORTHO05D000319 6.0e-14 80.9 93 51.6
FAN21G2983 Fragaria x ananassa HOM05D000287 ORTHO05D000319 7.9e-14 80.5 96 47.9
FAN16G0635 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.0e-13 80.1 95 49.5
RcHm_v2.0_Chr7g0177361 Rosa chinensis HOM05D000287 ORTHO05D000319 1.3e-13 79.7 94 48.9
MD11G1157200 Malus domestica HOM05D000287 ORTHO05D000319 2.3e-13 79.0 93 47.3
FAN11G2619 Fragaria x ananassa HOM05D000287 ORTHO05D209247 8.7e-13 77.0 92 50.0
MD11G1157300 Malus domestica HOM05D000287 ORTHO05D000319 1.6e-11 72.8 94 46.8
FAN01G2563 Fragaria x ananassa HOM05D000287 ORTHO05D000319 2.4e-10 68.9 68 51.5
FAN06G0558 Fragaria x ananassa HOM05D000287 ORTHO05D000319 3.1e-10 68.6 65 52.3
FAN10G4248 Fragaria x ananassa HOM05D000287 ORTHO05D000319 4.1e-10 68.2 93 46.2
FvH4_7g14330 Fragaria vesca HOM05D000287 ORTHO05D000319 5.3e-10 67.8 93 46.2
FAN06G0597 Fragaria x ananassa HOM05D005142 ORTHO05D006519 9.0e-10 67.0 93 44.1
FvH4_7g03260 Fragaria vesca HOM05D000287 ORTHO05D000319 3.4e-09 65.1 93 47.3
FAN06G0129 Fragaria x ananassa HOM05D000287 ORTHO05D000319 3.4e-09 65.1 93 47.3
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 3.4e-09 65.1 93 44.1
FAN10G1100 Fragaria x ananassa HOM05D000287 ORTHO05D000319 4.5e-09 64.7 93 43.0
FAN03G0394 Fragaria x ananassa HOM05D000287 ORTHO05D000319 5.9e-09 64.3 93 43.0
FAN10G2646 Fragaria x ananassa HOM05D000287 ORTHO05D000319 7.6e-09 63.9 93 41.9
Prupe.6G120400 Prunus persica HOM05D000287 ORTHO05D000319 1.3e-08 63.2 93 43.0
FvH4_2g39160 Fragaria vesca HOM05D000287 ORTHO05D000319 1.7e-08 62.8 93 40.9
AUR62020733 Chenopodium quinoa HOM05D000287 ORTHO05D000319 2.9e-08 62.0 93 41.9
FAN03G0995 Fragaria x ananassa HOM05D000287 ORTHO05D000319 8.5e-08 60.5 84 46.4
Potri.007G002400 Populus trichocarpa HOM05D000287 ORTHO05D000319 8.5e-08 60.5 93 39.8
FAN10G3689 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.4e-07 59.7 93 43.0
AUR62027979 Chenopodium quinoa HOM05D000287 ORTHO05D000319 1.9e-07 59.3 93 40.9
FAN10G2117 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.9e-07 59.3 65 53.8
Actinidia25731 Actinidia chinensis HOM05D000287 ORTHO05D000319 2.5e-07 58.9 93 39.8
FvH4_7g12550 Fragaria vesca HOM05D000287 ORTHO05D000319 2.5e-07 58.9 93 38.7
EL10Ac2g03618 Beta vulgaris HOM05D000287 ORTHO05D000319 3.2e-07 58.5 93 38.7
CAN.G503.19 Capsicum annuum HOM05D000287 ORTHO05D000319 3.2e-07 58.5 93 38.7
RcHm_v2.0_Chr1g0355351 Rosa chinensis HOM05D000287 ORTHO05D000001 3.2e-07 58.5 93 37.6
CSS0001973 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 4.2e-07 58.2 93 37.6
CSS0013028 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 4.2e-07 58.2 93 37.6
RcHm_v2.0_Chr1g0355301 Rosa chinensis HOM05D000287 ORTHO05D000319 5.5e-07 57.8 93 35.5
Sabra07G0001700 Salix brachista HOM05D000287 ORTHO05D000319 5.5e-07 57.8 93 38.7
vmacro20753 Vaccinium macrocarpon HOM05D000287 ORTHO05D000319 5.5e-07 57.8 93 36.6
vmacro20754 Vaccinium macrocarpon HOM05D000287 ORTHO05D000319 5.5e-07 57.8 93 36.6
Atru.chr3.4113 Acer truncatum HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 40.9
Dinv37486 Davidia involucrata HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 37.6
FvH4_4g00250 Fragaria vesca HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 39.8
FvH4_4g01400 Fragaria vesca HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 39.8
FAN12G2761 Fragaria x ananassa HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 39.8
FAN17G1160 Fragaria x ananassa HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 39.8
FAN22G2098 Fragaria x ananassa HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 39.8
RcHm_v2.0_Chr4g0384991 Rosa chinensis HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 39.8
vmacro20624 Vaccinium macrocarpon HOM05D000287 ORTHO05D000319 7.2e-07 57.4 93 36.6
FAN22G2079 Fragaria x ananassa HOM05D000287 ORTHO05D000319 9.3e-07 57.0 93 38.7
Rhsim10G0045800 Rhododendron simsii HOM05D000287 ORTHO05D000319 9.3e-07 57.0 93 38.7
Rhsim10G0047600 Rhododendron simsii HOM05D000287 ORTHO05D000319 9.3e-07 57.0 93 38.7
Hund03219 Selenicereus undatus HOM05D000287 ORTHO05D000319 9.3e-07 57.0 93 35.5
TWI56G0369 Tripterygium wilfordii HOM05D000287 ORTHO05D000319 9.3e-07 57.0 93 37.6
Actinidia02467 Actinidia chinensis HOM05D000287 ORTHO05D000319 1.2e-06 56.6 93 37.6
Actinidia07561 Actinidia chinensis HOM05D000287 ORTHO05D000319 1.2e-06 56.6 93 37.6
Eucgr.C00059 Eucalyptus grandis HOM05D000287 ORTHO05D000319 1.2e-06 56.6 93 37.6
Rhsim10G0046100 Rhododendron simsii HOM05D000287 ORTHO05D000319 1.2e-06 56.6 93 37.6
TAR383G0206 Trochodendron aralioides HOM05D000287 ORTHO05D000319 1.2e-06 56.6 93 36.6
Duzib235G0797 Durio zibethinus HOM05D000287 ORTHO05D000319 1.6e-06 56.2 93 37.6
Rhsim04G0124400 Rhododendron simsii HOM05D000287 ORTHO05D000319 1.6e-06 56.2 93 36.6
CiPaw.16G105100 Carya illinoinensis HOM05D000287 ORTHO05D000319 2.1e-06 55.8 93 37.6
TAR383G0654 Trochodendron aralioides HOM05D000287 ORTHO05D000319 2.1e-06 55.8 93 37.6
Migut.L01923 Erythranthe guttata HOM05D000287 ORTHO05D000319 2.7e-06 55.5 93 36.6
Lsat_1_v5_gn_5_81000 Lactuca sativa HOM05D000287 ORTHO05D000319 2.7e-06 55.5 93 38.7
PGR044G1009 Punica granatum HOM05D000287 ORTHO05D000319 2.7e-06 55.5 93 37.6
QL05p071789 Quercus lobata HOM05D000287 ORTHO05D000319 2.7e-06 55.5 93 36.6
Hund05663 Selenicereus undatus HOM05D000287 ORTHO05D000319 2.7e-06 55.5 93 37.6
TWI31G1094 Tripterygium wilfordii HOM05D000287 ORTHO05D000319 2.7e-06 55.5 93 35.5
Cfa020762 Carpinus fangiana HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 37.6
Duzib192G0053 Durio zibethinus HOM05D000287 ORTHO05D000319 3.6e-06 55.1 91 37.4
HanXRQChr10g0309481 Helianthus annuus HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 36.6
HanXRQChr12g0358561 Helianthus annuus HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 37.6
MD04G1002500 Malus domestica HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 38.7
MD13G1284800 Malus domestica HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 38.7
Peaxi162Scf00474g00416 Petunia axillaris HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 36.6
Prupe.1G002500 Prunus persica HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 38.7
QL05p085702 Quercus lobata HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 36.6
QL08p016784 Quercus lobata HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 36.6
QL11p007332 Quercus lobata HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 37.6
Rhsim01G0107600 Rhododendron simsii HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 35.5
Rhsim01G0107800 Rhododendron simsii HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 35.5
RhsimUnG0150100 Rhododendron simsii HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 35.5
TAR636G0154 Trochodendron aralioides HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 36.6
TAR636G3185 Trochodendron aralioides HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 36.6
vmacro20752 Vaccinium macrocarpon HOM05D000287 ORTHO05D000319 3.6e-06 55.1 93 35.5
CSS0037030 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 4.6e-06 54.7 93 37.6
COL.COLO4_38461 Corchorus olitorius HOM05D000287 ORTHO05D000319 4.6e-06 54.7 93 36.6
Nn8g41167 Nelumbo nucifera HOM05D000287 ORTHO05D000319 4.6e-06 54.7 93 35.5
Potri.006G085500 Populus trichocarpa HOM05D000287 ORTHO05D000319 4.6e-06 54.7 93 37.6
Actinidia38533 Actinidia chinensis HOM05D000287 ORTHO05D000319 6.1e-06 54.3 93 35.5
Eucgr.C02161 Eucalyptus grandis HOM05D000287 ORTHO05D000319 6.1e-06 54.3 93 36.6
Lj5C799G2 Lonicera japonica HOM05D000287 ORTHO05D000319 6.1e-06 54.3 93 38.7
Rhsim01G0107700 Rhododendron simsii HOM05D000287 ORTHO05D000319 6.1e-06 54.3 93 36.6
Thecc.06G052900 Theobroma cacao HOM05D000287 ORTHO05D000319 6.1e-06 54.3 93 36.6
Atru.chr10.455_Atru.chr10.456 Acer truncatum HOM05D000287 ORTHO05D000319 7.9e-06 53.9 65 43.1
Migut.J00845 Erythranthe guttata HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 36.6
Migut.J00848 Erythranthe guttata HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 36.6
Migut.J00849 Erythranthe guttata HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 36.6
Gohir.A08G014900 Gossypium hirsutum HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 35.5
Gohir.D08G025500 Gossypium hirsutum HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 35.5
Gorai.004G020800 Gossypium raimondii HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 35.5
Rhsim01G0107200 Rhododendron simsii HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 34.4
RcHm_v2.0_Chr1g0355331 Rosa chinensis HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 37.6
TAR636G0895 Trochodendron aralioides HOM05D000287 ORTHO05D000319 7.9e-06 53.9 93 35.5
GSVIVG01035577001 Vitis vinifera HOM05D000287 ORTHO05D000319 7.9e-06 53.9 65 44.6


User provided reference genes

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