Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3358 Fragaria x ananassa HOM05D000003 ORTHO05D045939 3.1e-75 285.0 143 100.0
FvH4_6g18164 Fragaria vesca HOM05D000003 ORTHO05D000022 2.6e-21 105.9 108 53.7
FvH4_5g27995 Fragaria vesca HOM05D000003 ORTHO05D000022 2.9e-20 102.4 164 40.2
FvH4_3g27901 Fragaria vesca HOM05D000003 ORTHO05D000022 5.4e-19 98.2 164 39.0
RcHm_v2.0_Chr2g0125461 Rosa chinensis HOM05D000003 ORTHO05D000022 9.5e-16 87.4 162 37.7
FvH4_5g34313 Fragaria vesca HOM05D000003 ORTHO05D045939 2.1e-15 86.3 90 57.8
RcHm_v2.0_Chr1g0334981 Rosa chinensis HOM05D000003 ORTHO05D000022 8.1e-15 84.3 96 52.1
RcHm_v2.0_Chr3g0486471 Rosa chinensis HOM05D000003 ORTHO05D000022 8.9e-14 80.9 95 49.5
RcHm_v2.0_Chr2g0128961 Rosa chinensis HOM05D000003 ORTHO05D000022 2.2e-12 76.3 89 49.4
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 2.9e-12 75.9 97 43.3
FvH4_2g12671 Fragaria vesca HOM05D000003 ORTHO05D000022 4.9e-12 75.1 96 44.8
FvH4_3g30492 Fragaria vesca HOM05D000003 ORTHO05D000022 2.4e-11 72.8 93 47.3
FvH4_2g12061 Fragaria vesca HOM05D000003 ORTHO05D000022 9.2e-11 70.9 94 43.6
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 9.2e-11 70.9 101 41.6
RcHm_v2.0_Chr5g0040021 Rosa chinensis HOM05D000003 ORTHO05D000022 1.2e-10 70.5 91 42.9
RcHm_v2.0_Chr1g0322281 Rosa chinensis HOM05D000003 ORTHO05D000022 1.0e-09 67.4 80 51.2
RcHm_v2.0_Chr2g0127141 Rosa chinensis HOM05D000003 ORTHO05D000022 3.9e-09 65.5 106 43.4
RcHm_v2.0_Chr4g0437331 Rosa chinensis HOM05D000003 ORTHO05D000022 3.9e-09 65.5 92 40.2
FvH4_6g25491 Fragaria vesca HOM05D000003 ORTHO05D000022 5.1e-09 65.1 82 48.8
RcHm_v2.0_Chr5g0074971 Rosa chinensis HOM05D000003 ORTHO05D000022 6.6e-09 64.7 86 41.9
RcHm_v2.0_Chr7g0200931 Rosa chinensis HOM05D000003 ORTHO05D000022 6.6e-09 64.7 106 38.7
RcHm_v2.0_Chr2g0146161 Rosa chinensis HOM05D000003 ORTHO05D000022 1.5e-08 63.5 97 41.2
FvH4_2g09413 Fragaria vesca HOM05D000003 ORTHO05D000022 2.5e-08 62.8 82 47.6
RcHm_v2.0_Chr6g0266871 Rosa chinensis HOM05D000003 ORTHO05D000022 2.5e-08 62.8 82 45.1
FvH4_6g10681 Fragaria vesca HOM05D000003 ORTHO05D000004 4.3e-08 62.0 45 68.9
RcHm_v2.0_Chr2g0132921 Rosa chinensis HOM05D000003 ORTHO05D000022 4.3e-08 62.0 87 41.4
FvH4_1g24182 Fragaria vesca HOM05D000003 ORTHO05D000004 5.6e-08 61.6 97 43.3
RcHm_v2.0_Chr2g0144631 Rosa chinensis HOM05D000003 ORTHO05D000022 9.5e-08 60.8 89 43.8
RcHm_v2.0_Chr7g0220091 Rosa chinensis HOM05D000003 ORTHO05D000022 1.6e-07 60.1 87 40.2
FvH4_2g14202 Fragaria vesca HOM05D000003 ORTHO05D000022 2.1e-07 59.7 84 42.9
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 2.1e-07 59.7 140 32.1
FvH4_6g13733 Fragaria vesca HOM05D000003 ORTHO05D000022 2.8e-07 59.3 113 35.4
Prupe.1G291700 Prunus persica HOM05D000061 ORTHO05D000050 2.8e-07 59.3 87 41.4
RcHm_v2.0_Chr7g0225251 Rosa chinensis HOM05D000003 ORTHO05D000022 2.8e-07 59.3 87 41.4
FvH4_5g34262 Fragaria vesca HOM05D000003 ORTHO05D000022 4.7e-07 58.5 79 44.3
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 4.7e-07 58.5 92 38.0
RcHm_v2.0_Chr2g0152401 Rosa chinensis HOM05D000003 ORTHO05D000022 8.1e-07 57.8 80 43.8
RcHm_v2.0_Chr6g0291741 Rosa chinensis HOM05D000003 ORTHO05D000004 8.1e-07 57.8 90 41.1
FvH4_1g29782 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-06 57.0 43 65.1
FvH4_6g25791 Fragaria vesca HOM05D000003 ORTHO05D000022 2.4e-06 56.2 54 51.9
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 6.8e-06 54.7 87 35.6


User provided reference genes

Program Settings