Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 6.8e-210 733.8 384 100.0
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 2.1e-198 695.7 377 95.5
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 9.9e-193 676.8 361 97.5
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 9.9e-193 676.8 361 97.5
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 5.4e-183 644.4 363 91.7
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 9.3e-151 537.3 366 76.2
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 3.5e-150 535.4 365 76.2
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 1.9e-148 529.6 366 74.6
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 2.3e-125 453.0 367 64.6
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 2.0e-124 449.9 370 64.6
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 2.6e-124 449.5 370 63.5
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 2.2e-123 446.4 364 63.7
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 2.2e-123 446.4 364 64.6
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 3.1e-122 442.6 367 62.7
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 7.0e-122 441.4 367 64.3
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 4.5e-121 438.7 367 64.0
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 4.5e-121 438.7 367 62.4
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.9e-121 438.3 363 64.2
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.0e-120 437.6 363 63.9
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.7e-120 436.8 367 62.9
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.2e-120 436.4 367 63.5
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 6.5e-120 434.9 370 61.1
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 6.5e-120 434.9 367 63.2
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 6.5e-120 434.9 370 64.6
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 1.9e-119 433.3 366 62.6
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 3.2e-119 432.6 364 64.0
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 4.2e-119 432.2 364 60.2
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 2.7e-118 429.5 380 61.1
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 6.1e-118 428.3 372 60.5
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 8.8e-117 424.5 367 61.0
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 8.8e-117 424.5 367 61.9
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 2.6e-116 422.9 371 61.2
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 2.4e-114 416.4 366 60.7
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 2.4e-114 416.4 366 60.7
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 1.3e-112 410.6 363 59.5
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.6e-110 403.7 368 57.9
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 2.7e-110 402.9 364 58.8
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 4.7e-110 402.1 368 58.7
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 8.0e-110 401.4 366 57.7
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 1.8e-109 400.2 368 60.1
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 3.0e-109 399.4 375 56.8
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 4.0e-109 399.1 368 58.4
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 5.2e-109 398.7 368 58.4
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.2e-108 397.5 364 58.2
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.2e-108 397.5 369 58.3
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.5e-108 397.1 364 57.7
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.5e-108 397.1 364 58.8
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 3.4e-108 396.0 365 57.8
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 5.7e-108 395.2 362 58.0
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 9.8e-108 394.4 370 56.2
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.3e-107 394.0 368 57.9
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.7e-107 393.7 368 58.4
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 2.2e-107 393.3 361 59.3
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 2.8e-107 392.9 365 59.2
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 3.7e-107 392.5 366 56.8
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 6.3e-107 391.7 367 58.3
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 6.3e-107 391.7 371 57.7
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 2.4e-106 389.8 370 55.7
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 3.1e-106 389.4 364 56.0
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.1e-106 389.4 364 58.0
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 7.0e-106 388.3 205 98.0
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 9.2e-106 387.9 363 57.3
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 9.2e-106 387.9 367 56.7
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.6e-105 387.1 364 55.8
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 2.0e-105 386.7 363 56.5
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 3.5e-105 386.0 367 56.4
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 2.3e-104 383.3 369 55.8
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 2.9e-104 382.9 367 57.2
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 3.8e-104 382.5 369 56.6
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 1.1e-103 380.9 329 62.0
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.9e-103 380.2 383 54.6
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 2.5e-103 379.8 367 55.9
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 7.3e-103 378.3 376 54.0
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 9.5e-103 377.9 483 46.2
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 2.1e-102 376.7 364 56.0
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 2.1e-102 376.7 364 54.9
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 2.1e-102 376.7 366 53.8
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 1.0e-101 374.4 366 55.2
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 1.4e-101 374.0 365 55.1
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 1.4e-101 374.0 367 55.0
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 4.0e-101 372.5 393 53.4
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 5.2e-101 372.1 368 55.2
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 6.8e-101 371.7 371 53.9
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 8.9e-101 371.3 380 54.7
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 1.2e-100 370.9 368 54.3
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 5.7e-100 368.6 367 53.7
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 5.7e-100 368.6 366 53.8
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 1.3e-99 367.5 318 60.7
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 1.3e-99 367.5 365 54.5
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 1.3e-99 367.5 360 54.4
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.3e-99 367.5 313 63.3
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 1.7e-99 367.1 397 50.9
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.7e-99 365.9 378 53.2
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 4.9e-99 365.5 366 53.8
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 4.9e-99 365.5 370 54.1
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 4.9e-99 365.5 387 52.7
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 4.9e-99 365.5 367 55.3
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 8.3e-99 364.8 505 43.6
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 1.4e-98 364.0 366 53.6
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 3.2e-98 362.8 364 53.6
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 5.4e-98 362.1 423 49.2
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 7.0e-98 361.7 365 53.4
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 7.0e-98 361.7 383 53.0
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.3e-96 357.5 356 54.2
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 1.3e-96 357.5 309 59.9
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.7e-96 357.1 316 61.4
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 6.6e-96 355.1 364 52.7
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 8.6e-96 354.8 363 52.6
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-95 354.0 349 54.2
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.5e-95 354.0 355 54.1
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 1.9e-95 353.6 398 50.0
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 2.5e-95 353.2 374 52.1
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 2.5e-95 353.2 349 53.9
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 5.6e-95 352.1 403 49.4
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 9.5e-95 351.3 349 53.9
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 1.5e-92 344.0 366 51.4
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 9.2e-90 334.7 288 59.7
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 1.2e-89 334.3 368 50.3
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 1.3e-88 330.9 286 56.6
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 3.0e-88 329.7 351 51.9
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 3.9e-88 329.3 558 40.5
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 3.9e-88 329.3 367 50.4
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 8.6e-88 328.2 314 57.3
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 7.3e-87 325.1 376 47.9
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 3.4e-84 316.2 369 47.4
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 7.5e-84 315.1 366 50.0
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 4.9e-83 312.4 367 49.9
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 3.2e-82 309.7 306 54.6
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 9.2e-82 308.1 310 55.5
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 9.9e-76 288.1 297 52.2
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 9.2e-74 281.6 478 39.1
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.8e-69 267.3 209 67.9
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 2.2e-67 260.4 207 63.8
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.2e-65 254.6 292 51.0
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 8.7e-64 248.4 206 60.2
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 2.8e-62 243.4 314 43.9
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 6.2e-62 242.3 208 60.1
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 8.1e-62 241.9 212 59.0
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.3e-59 234.6 306 44.4
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.4e-58 231.1 218 56.9
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 4.2e-58 229.6 336 41.4
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.3e-58 228.4 218 56.4
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 1.8e-56 224.2 373 36.2
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.3e-55 219.9 160 71.9
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.1e-53 214.9 160 70.6
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.6e-52 210.3 172 65.1
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 5.8e-52 209.1 172 65.1
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 7.6e-52 208.8 164 65.9
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.9e-51 206.8 172 64.5
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.4e-50 203.8 166 65.7
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 2.3e-48 197.2 371 34.2
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.0e-48 196.8 176 61.4
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 9.6e-47 191.8 378 34.7
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 2.8e-46 190.3 281 44.1
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.1e-45 188.3 172 61.0
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.1e-45 188.3 381 35.2
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.1e-45 188.3 155 62.6
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 3.1e-45 186.8 378 33.1
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 4.0e-45 186.4 204 48.5
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 1.0e-43 181.8 369 32.2
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 6.0e-41 172.6 257 41.6
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 1.9e-39 167.5 366 32.2
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 4.8e-38 162.9 162 58.0
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.0e-35 152.9 151 57.6
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.1e-34 151.8 161 50.9
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 7.2e-34 149.1 161 50.3
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.3e-34 148.7 106 73.6
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 5.7e-31 139.4 122 59.8
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 7.4e-31 139.0 124 60.5
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 1.2e-28 131.7 173 45.1
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 4.5e-28 129.8 138 50.0
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 3.2e-26 123.6 133 53.4
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 1.0e-24 118.6 130 44.6
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 1.8e-24 117.9 139 49.6
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.4e-21 108.2 304 29.3
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 2.4e-21 107.5 327 28.1


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