Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3106 Fragaria x ananassa HOM05D007421 ORTHO05D009203 5.3e-87 324.3 164 100.0
FvH4_5g35251 Fragaria vesca HOM05D007421 ORTHO05D009203 1.3e-53 213.4 154 77.3
RcHm_v2.0_Chr5g0049711 Rosa chinensis HOM05D007421 ORTHO05D009203 6.6e-45 184.5 189 60.8
RcHm_v2.0_Chr7g0236151 Rosa chinensis HOM05D007421 ORTHO05D009203 4.4e-41 171.8 179 60.3
RcHm_v2.0_Chr0c11g0499381 Rosa chinensis HOM05D007421 ORTHO05D009203 2.2e-24 116.3 93 72.0
RcHm_v2.0_Chr7g0236451 Rosa chinensis HOM05D007421 ORTHO05D009203 6.0e-22 108.2 91 70.3
RcHm_v2.0_Chr7g0236491 Rosa chinensis HOM05D007421 ORTHO05D009203 6.0e-22 108.2 91 70.3
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 1.6e-19 100.1 215 38.1
RcHm_v2.0_Chr7g0231151 Rosa chinensis HOM05D007421 ORTHO05D009203 4.7e-19 98.6 116 56.9
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 8.1e-19 97.8 231 38.1
RcHm_v2.0_Chr7g0236421 Rosa chinensis HOM05D007421 ORTHO05D009203 7.6e-17 91.3 115 54.8
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 4.9e-16 88.6 236 35.6
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.1e-15 87.4 233 34.8
FAN25G2641 Fragaria x ananassa HOM05D007421 ORTHO05D009203 4.6e-14 82.0 54 79.6
MD08G1222100 Malus domestica HOM05D007421 ORTHO05D009203 1.5e-09 67.0 144 37.5
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 9.9e-09 64.3 143 37.1
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 2.2e-08 63.2 151 35.1
Lj9C318G13 Lonicera japonica HOM05D007421 ORTHO05D009203 2.9e-08 62.8 128 35.2
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 3.8e-08 62.4 83 43.4
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 6.4e-08 61.6 132 37.1
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 1.1e-07 60.8 148 32.4
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 1.9e-07 60.1 135 36.3
Eucgr.I02692 Eucalyptus grandis HOM05D007421 ORTHO05D009203 3.2e-07 59.3 123 37.4
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 4.2e-07 58.9 78 48.7
Hma1.2p1_0012F.1_g007610 Hydrangea macrophylla HOM05D007421 ORTHO05D009203 5.4e-07 58.5 62 53.2
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 9.3e-07 57.8 141 33.3
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 1.6e-06 57.0 158 34.2
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 2.7e-06 56.2 148 32.4
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 4.6e-06 55.5 59 57.6
arahy.Tifrunner.gnm1.ann1.LE3KL9 Arachis hypogaea HOM05D007421 ORTHO05D009203 6.0e-06 55.1 86 39.5
arahy.Tifrunner.gnm1.ann1.VL1QZD Arachis hypogaea HOM05D007421 ORTHO05D009203 6.0e-06 55.1 86 39.5
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 6.0e-06 55.1 146 32.9
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 7.8e-06 54.7 87 40.2
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 7.8e-06 54.7 86 46.5


User provided reference genes

Program Settings