Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 6.0e-137 491.1 245 100.0
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 7.8e-137 490.7 244 100.0
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 1.5e-135 486.5 243 99.6
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.1e-134 482.6 244 98.4
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.1e-126 456.1 262 89.3
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.5e-124 449.9 243 90.5
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 3.2e-122 442.2 243 88.5
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 1.5e-116 423.3 243 84.8
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 2.0e-116 422.9 243 84.4
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.4e-116 422.2 243 83.5
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 9.9e-116 420.6 243 84.4
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 9.9e-116 420.6 243 84.4
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.7e-115 419.9 241 83.8
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.7e-115 419.9 243 84.4
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 5.4e-114 414.8 243 83.1
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 7.1e-114 414.5 244 81.6
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 7.1e-114 414.5 242 83.1
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 9.3e-114 414.1 240 82.9
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 2.7e-113 412.5 240 83.8
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 3.5e-113 412.1 243 81.9
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 6.0e-113 411.4 243 81.9
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.0e-112 410.6 243 82.3
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.7e-112 409.8 243 82.3
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 5.1e-112 408.3 243 81.5
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 5.1e-112 408.3 243 81.1
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 5.1e-112 408.3 243 79.8
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 8.7e-112 407.5 259 78.8
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 8.7e-112 407.5 239 81.2
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.1e-111 407.1 244 81.1
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 2.5e-111 406.0 244 78.3
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 4.3e-111 405.2 243 81.5
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 4.3e-111 405.2 243 80.7
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 5.6e-111 404.8 243 80.2
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 5.6e-111 404.8 243 80.2
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 5.6e-111 404.8 244 78.7
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 5.6e-111 404.8 243 81.1
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 5.6e-111 404.8 245 81.6
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 7.3e-111 404.4 244 80.3
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 2.8e-110 402.5 243 80.2
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.6e-110 402.1 244 81.1
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 4.8e-110 401.7 244 80.7
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.4e-109 400.2 243 79.8
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 2.4e-109 399.4 244 79.9
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 2.4e-109 399.4 245 80.4
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 3.1e-109 399.1 245 77.6
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 3.1e-109 399.1 244 80.3
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 5.3e-109 398.3 243 79.4
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.2e-108 397.1 241 78.0
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 3.4e-108 395.6 249 79.9
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 5.8e-108 394.8 248 79.0
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 5.8e-108 394.8 248 79.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 9.9e-108 394.0 275 72.7
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 2.2e-107 392.9 244 79.9
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 2.9e-107 392.5 248 78.2
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 2.9e-107 392.5 248 78.2
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 2.9e-107 392.5 248 78.2
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 2.9e-107 392.5 245 78.4
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 6.4e-107 391.3 244 79.5
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 1.9e-106 389.8 243 77.8
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 3.2e-106 389.0 240 79.6
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 3.2e-106 389.0 243 75.3
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 9.3e-106 387.5 243 75.3
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 3.6e-102 375.6 227 79.3
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 4.0e-101 372.1 227 80.2
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 4.0e-101 372.1 211 85.3
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 4.0e-101 372.1 250 74.0
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 9.9e-100 367.5 217 82.5
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 1.8e-93 346.7 196 84.7
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 5.3e-93 345.1 241 68.0
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.2e-92 344.0 212 79.7
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.2e-91 339.7 243 70.4
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 6.5e-91 338.2 303 57.4
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 3.2e-90 335.9 196 81.6
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.5e-87 327.0 204 77.0
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 4.3e-87 325.5 212 75.5
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 4.3e-87 325.5 196 79.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 7.4e-87 324.7 205 76.1
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.1e-85 320.9 196 78.1
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 1.8e-85 320.1 182 81.9
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 2.9e-83 312.8 245 62.9
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.0e-80 304.3 188 76.6
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 1.5e-79 300.4 253 61.7
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.6e-78 297.0 249 60.2
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 3.7e-78 295.8 244 60.2
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 3.4e-76 289.3 166 81.3
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.4e-74 283.9 240 57.9
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 2.5e-74 283.1 182 75.8
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.6e-73 280.4 240 58.3
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 4.6e-73 278.9 276 55.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.4e-69 266.5 221 61.5
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.7e-67 260.4 154 79.2
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 7.2e-66 255.0 180 67.2
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 9.4e-66 254.6 185 69.2
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.1e-65 251.9 243 53.1
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 1.4e-64 250.8 159 74.8
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 2.6e-63 246.5 211 57.3
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 6.3e-62 241.9 183 67.2
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.6e-60 236.5 243 52.3
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 9.1e-45 184.9 117 76.1
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 3.5e-44 183.0 120 71.7
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 2.3e-40 170.2 209 47.4
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 2.7e-36 156.8 90 85.6
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.9e-34 150.6 90 83.3
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 1.4e-29 134.4 104 63.5
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.0e-24 118.2 98 54.1
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 9.2e-21 105.1 112 51.8
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 3.5e-20 103.2 59 86.4
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-19 100.5 117 47.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.9e-19 99.8 56 83.9
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 7.3e-18 95.5 98 49.0
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 2.6e-15 87.0 58 67.2
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 9.2e-13 78.6 164 32.9
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 1.3e-11 74.7 49 73.5
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 8.6e-11 72.0 41 75.6
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.5e-10 71.2 47 63.8
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 8.9e-08 62.0 243 25.9
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 9.9e-07 58.5 33 87.9
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 8.4e-06 55.5 52 51.9


User provided reference genes

Program Settings