Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.9e-55 217.6 114 100.0
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.1e-54 216.5 114 99.1
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 1.5e-32 142.9 114 74.6
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 4.4e-24 114.8 114 58.8
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 3.8e-23 111.7 110 64.5
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 3.8e-23 111.7 110 64.5
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.0e-17 91.7 99 57.6
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 9.0e-17 90.5 104 52.9
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 2.9e-15 85.5 107 50.5
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 8.4e-15 84.0 98 53.1
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 8.4e-15 84.0 98 53.1
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 2.4e-14 82.4 95 52.6
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 3.2e-14 82.0 100 51.0
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 5.4e-14 81.3 112 46.4
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 7.1e-14 80.9 107 45.8
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 7.1e-14 80.9 108 46.3
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 2.1e-13 79.3 112 45.5
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 6.0e-13 77.8 98 51.0
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 7.9e-13 77.4 107 45.8
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 3.0e-12 75.5 109 44.0
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 3.0e-12 75.5 110 43.6
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 3.9e-12 75.1 103 44.7
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 5.1e-12 74.7 104 47.1
Aqoxy6G00664 Aquilegia oxysepala HOM05D007802 ORTHO05D009879 6.7e-12 74.3 103 44.7
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 6.7e-12 74.3 102 46.1
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 8.7e-12 73.9 112 42.9
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 1.1e-11 73.6 112 42.9
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 1.5e-11 73.2 106 43.4
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 1.5e-11 73.2 95 47.4
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 1.9e-11 72.8 101 47.5
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 2.5e-11 72.4 108 45.4
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 3.3e-11 72.0 109 43.1
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 4.3e-11 71.6 112 41.1
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 4.3e-11 71.6 112 42.0
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 4.3e-11 71.6 98 44.9
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 5.6e-11 71.2 111 42.3
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 5.6e-11 71.2 108 44.4
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 9.6e-11 70.5 111 41.4
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 9.6e-11 70.5 111 41.4
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 1.3e-10 70.1 98 43.9
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 2.1e-10 69.3 111 41.4
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 2.1e-10 69.3 111 40.5
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 2.1e-10 69.3 100 44.0
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 2.8e-10 68.9 98 44.9
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 2.8e-10 68.9 95 45.3
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 3.6e-10 68.6 111 40.5
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 3.6e-10 68.6 105 41.9
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 6.2e-10 67.8 109 44.0
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 6.2e-10 67.8 91 46.2
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 6.2e-10 67.8 109 44.0
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 6.2e-10 67.8 109 44.0
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 6.2e-10 67.8 105 41.9
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 6.2e-10 67.8 107 42.1
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 8.1e-10 67.4 108 43.5
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 1.4e-09 66.6 98 42.9
FAN17G1901 Fragaria x ananassa HOM05D003602 ORTHO05D020334 1.4e-09 66.6 43 83.7
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 1.4e-09 66.6 95 44.2
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 1.4e-09 66.6 107 43.9
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 1.8e-09 66.2 98 43.9
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 2.4e-09 65.9 95 44.2
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 2.4e-09 65.9 106 41.5
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 3.1e-09 65.5 98 41.8
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 3.1e-09 65.5 103 39.8
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 6.9e-09 64.3 102 42.2
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 6.9e-09 64.3 98 40.8
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 1.5e-08 63.2 98 39.8
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 2.0e-08 62.8 102 38.2
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 2.0e-08 62.8 112 38.4
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 5.8e-08 61.2 113 38.1
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 7.6e-08 60.8 105 41.0
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 9.9e-08 60.5 100 42.0
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 1.3e-07 60.1 109 38.5
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 2.2e-07 59.3 105 41.0
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 2.2e-07 59.3 104 39.4
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 1.1e-06 57.0 95 40.0
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.1e-06 57.0 97 42.3
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 1.4e-06 56.6 98 39.8
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 2.4e-06 55.8 101 35.6
arahy.Tifrunner.gnm1.ann1.J1FBU0 Arachis hypogaea HOM05D007802 ORTHO05D009879 9.3e-06 53.9 99 36.4
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 9.3e-06 53.9 97 37.1


User provided reference genes

Program Settings