Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.7e-120 435.3 210 100.0
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.6e-99 366.3 201 91.5
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 2.0e-99 365.9 192 94.3
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.1e-96 355.9 211 85.8
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 5.0e-82 308.1 158 95.6
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 8.0e-80 300.8 156 93.6
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 7.5e-78 294.3 158 91.8
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 2.7e-75 285.8 181 77.3
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 8.6e-74 280.8 194 73.2
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.5e-73 280.0 196 74.0
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 7.3e-73 277.7 156 87.8
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 8.9e-71 270.8 158 85.4
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 8.9e-71 270.8 156 84.6
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.5e-70 270.0 156 84.0
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 2.0e-70 269.6 158 84.2
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 2.6e-70 269.2 156 84.6
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 4.4e-70 268.5 156 84.0
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 5.8e-70 268.1 156 84.6
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 5.8e-70 268.1 158 82.9
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 7.5e-70 267.7 156 83.3
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 7.5e-70 267.7 158 83.5
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 1.3e-69 266.9 158 82.9
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 1.3e-69 266.9 158 82.9
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 1.7e-69 266.5 156 83.3
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.7e-69 266.5 156 84.0
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 1.7e-69 266.5 156 83.3
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 2.2e-69 266.2 157 82.2
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 2.2e-69 266.2 158 82.9
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 2.2e-69 266.2 156 84.0
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 2.2e-69 266.2 156 84.0
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 2.2e-69 266.2 156 84.0
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 2.9e-69 265.8 158 82.3
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 3.7e-69 265.4 156 82.7
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 4.9e-69 265.0 156 83.3
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 4.9e-69 265.0 157 82.2
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 8.3e-69 264.2 157 81.5
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 1.4e-68 263.5 157 82.2
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 1.4e-68 263.5 156 82.1
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 1.9e-68 263.1 157 82.2
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 2.4e-68 262.7 156 82.7
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 2.4e-68 262.7 156 82.1
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 3.2e-68 262.3 158 82.3
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 4.1e-68 261.9 156 82.1
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 4.1e-68 261.9 156 81.4
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 5.4e-68 261.5 158 81.0
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 5.4e-68 261.5 157 81.5
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 5.4e-68 261.5 156 83.3
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 7.1e-68 261.2 157 81.5
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 7.1e-68 261.2 157 82.8
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.2e-67 260.4 158 79.7
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.2e-67 260.4 158 79.7
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.2e-67 260.4 135 94.8
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 1.6e-67 260.0 156 81.4
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 1.6e-67 260.0 156 82.1
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 1.6e-67 260.0 156 82.1
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 2.1e-67 259.6 158 79.1
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 2.7e-67 259.2 157 80.9
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 3.5e-67 258.8 158 79.1
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 4.6e-67 258.5 156 82.1
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 6.0e-67 258.1 201 65.2
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 7.8e-67 257.7 157 79.6
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 7.8e-67 257.7 156 82.1
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 1.0e-66 257.3 156 80.1
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 1.0e-66 257.3 156 80.1
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 2.3e-66 256.1 156 79.5
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 2.3e-66 256.1 156 79.5
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 3.0e-66 255.8 156 80.8
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 3.0e-66 255.8 156 77.6
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 3.9e-66 255.4 156 78.8
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 5.1e-66 255.0 156 78.8
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 5.1e-66 255.0 156 78.8
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 6.6e-66 254.6 156 79.5
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 6.6e-66 254.6 158 78.5
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 8.6e-66 254.2 156 78.8
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 1.1e-65 253.8 156 78.8
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 1.1e-65 253.8 156 78.2
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 1.1e-65 253.8 156 78.2
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 1.1e-65 253.8 156 78.2
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 1.1e-65 253.8 158 77.2
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 2.5e-65 252.7 158 77.2
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 3.3e-65 252.3 156 78.2
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 5.6e-65 251.5 156 77.6
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 7.3e-65 251.1 158 79.7
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 3.6e-64 248.8 182 70.3
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.1e-63 247.3 156 78.8
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 1.4e-63 246.9 158 76.6
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 3.1e-63 245.7 156 78.2
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 3.1e-63 245.7 156 78.2
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 6.8e-63 244.6 156 76.3
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.6e-62 242.7 157 77.1
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.4e-62 242.3 210 63.8
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.4e-62 242.3 173 71.7
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 4.4e-62 241.9 166 72.9
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 4.4e-62 241.9 196 64.8
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 2.9e-61 239.2 143 80.4
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 9.3e-60 234.2 210 61.9
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 1.2e-59 233.8 143 77.6
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 3.5e-59 232.3 156 74.4
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 7.8e-59 231.1 158 75.3
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 8.7e-58 227.6 151 72.8
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 8.7e-58 227.6 130 84.6
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 3.6e-56 222.2 136 80.1
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 4.0e-55 218.8 130 78.5
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.0e-55 218.8 158 72.2
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.3e-53 213.8 154 68.2
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 2.4e-47 193.0 121 74.4
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.5e-46 190.3 136 65.4
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 9.9e-46 187.6 100 89.0
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 6.4e-45 184.9 134 71.6
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 7.1e-44 181.4 157 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 2.1e-43 179.9 139 61.2
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 2.1e-43 179.9 136 61.8
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.5e-43 179.1 190 56.3
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 7.4e-41 171.4 142 56.3
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 6.2e-40 168.3 160 58.1
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 2.6e-38 162.9 132 56.1
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 1.7e-37 160.2 110 69.1
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 1.2e-35 154.1 133 54.9
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 1.8e-34 150.2 112 60.7
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 1.1e-31 141.0 78 83.3
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 9.0e-31 137.9 110 52.7
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 3.5e-27 125.9 132 52.3
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.6e-24 117.1 130 55.4
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 7.7e-22 108.2 137 48.2
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.5e-20 102.1 68 73.5
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.7e-19 99.8 120 50.0
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.7e-18 95.1 148 45.9
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 1.1e-17 94.4 126 42.9
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.7e-16 89.4 130 43.1
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 3.7e-16 89.4 53 83.0
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 3.2e-12 76.3 59 66.1
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 1.4e-10 70.9 47 78.7
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 5.1e-10 68.9 57 57.9
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 2.4e-07 60.1 32 75.0


User provided reference genes

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