Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 9.5e-121 436.8 212 100.0
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.0e-106 388.7 212 91.0
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 2.5e-105 385.6 212 90.6
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 7.3e-105 384.0 212 90.1
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.1e-103 380.2 212 89.2
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 2.8e-96 355.5 212 82.5
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 6.9e-87 324.3 213 74.2
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 2.0e-86 322.8 204 77.0
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 2.0e-86 322.8 204 77.0
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 1.3e-85 320.1 214 73.4
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 3.8e-85 318.5 212 73.1
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 3.8e-85 318.5 214 72.9
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 6.4e-85 317.8 214 72.9
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 6.4e-85 317.8 214 74.3
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 1.4e-84 316.6 212 72.2
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 1.9e-84 316.2 214 73.4
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.4e-84 315.8 199 75.9
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 4.2e-84 315.1 212 72.2
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 4.2e-84 315.1 204 74.5
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 4.2e-84 315.1 214 72.4
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 5.4e-84 314.7 211 72.5
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 7.1e-84 314.3 199 76.4
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 7.1e-84 314.3 204 73.0
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 7.1e-84 314.3 199 72.9
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 9.3e-84 313.9 201 73.6
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.6e-83 313.2 214 72.0
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 2.1e-83 312.8 205 71.2
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 2.7e-83 312.4 214 72.0
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 2.7e-83 312.4 202 73.8
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 3.5e-83 312.0 214 72.0
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 4.6e-83 311.6 199 73.9
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 6.0e-83 311.2 204 72.5
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 6.0e-83 311.2 209 72.7
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 7.9e-83 310.8 214 71.5
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 7.9e-83 310.8 199 75.4
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 7.9e-83 310.8 209 71.8
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 1.0e-82 310.5 214 70.1
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.7e-82 309.7 199 74.4
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 2.3e-82 309.3 212 70.8
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 2.3e-82 309.3 212 71.7
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 6.6e-82 307.8 194 75.3
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 6.6e-82 307.8 199 74.9
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 8.7e-82 307.4 214 71.0
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 8.7e-82 307.4 214 70.1
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 8.7e-82 307.4 199 74.4
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 1.1e-81 307.0 200 72.0
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.1e-81 307.0 201 73.1
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 1.1e-81 307.0 204 72.5
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 1.5e-81 306.6 204 72.1
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 1.5e-81 306.6 202 72.8
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 1.9e-81 306.2 200 72.0
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 1.9e-81 306.2 205 73.2
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 4.3e-81 305.1 211 70.1
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 4.3e-81 305.1 204 70.1
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 5.6e-81 304.7 212 70.3
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 7.3e-81 304.3 235 65.1
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 9.6e-81 303.9 202 70.3
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 9.6e-81 303.9 202 71.3
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 1.3e-80 303.5 200 71.0
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.3e-80 303.5 201 73.1
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 1.6e-80 303.1 202 70.8
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 1.6e-80 303.1 199 72.9
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 1.6e-80 303.1 204 70.6
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 1.6e-80 303.1 204 72.5
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 2.8e-80 302.4 202 70.8
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 2.8e-80 302.4 200 70.5
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 2.8e-80 302.4 202 70.3
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 2.8e-80 302.4 201 73.1
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 2.8e-80 302.4 199 73.4
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 2.8e-80 302.4 204 71.1
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 2.8e-80 302.4 199 73.4
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 2.8e-80 302.4 199 73.4
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 2.8e-80 302.4 199 73.4
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 3.6e-80 302.0 204 71.1
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 4.8e-80 301.6 214 70.1
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 4.8e-80 301.6 214 68.7
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 6.2e-80 301.2 209 71.8
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 6.2e-80 301.2 202 70.3
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 6.2e-80 301.2 204 70.1
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 6.2e-80 301.2 214 70.6
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 6.2e-80 301.2 204 69.1
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 8.1e-80 300.8 200 70.0
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 8.1e-80 300.8 211 69.2
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 8.1e-80 300.8 204 70.1
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 1.8e-79 299.7 199 70.9
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 1.8e-79 299.7 202 69.3
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.8e-79 299.7 202 71.3
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 2.4e-79 299.3 199 71.4
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 4.0e-79 298.5 204 70.1
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 4.0e-79 298.5 204 70.6
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 5.3e-79 298.1 202 68.8
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 5.3e-79 298.1 202 70.8
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 5.3e-79 298.1 209 68.9
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 6.9e-79 297.7 201 71.6
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 9.0e-79 297.4 214 67.8
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.6e-78 295.8 202 68.8
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 4.5e-78 295.0 212 67.5
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 4.5e-78 295.0 199 71.4
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 1.7e-77 293.1 199 70.4
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 1.7e-77 293.1 201 68.2
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.4e-76 290.0 204 68.6
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 1.4e-76 290.0 201 70.6
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 2.4e-76 289.3 202 68.3
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 4.2e-76 288.5 201 68.7
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 5.4e-76 288.1 202 67.8
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 7.1e-76 287.7 199 68.8
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 1.2e-75 287.0 202 66.8
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 2.1e-75 286.2 205 67.8
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 4.6e-75 285.0 199 67.8
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 7.9e-75 284.3 204 66.2
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 1.8e-74 283.1 205 65.9
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 3.9e-74 282.0 255 58.8
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 4.3e-73 278.5 205 65.4
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 5.6e-73 278.1 222 61.3
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 5.8e-70 268.1 167 76.6
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 1.9e-68 263.1 216 60.2
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 1.2e-67 260.4 285 50.2
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 6.7e-66 254.6 173 69.4
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 1.6e-64 250.0 166 74.7
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 1.4e-63 246.9 174 71.3
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 4.3e-57 225.3 146 74.0
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 1.6e-56 223.4 146 71.9
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 2.8e-56 222.6 428 36.0
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 1.5e-54 216.9 146 67.8
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 3.4e-54 215.7 136 76.5
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 2.9e-53 212.6 201 56.7
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 1.5e-46 190.3 138 68.1
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 1.1e-41 174.1 135 62.2
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 9.1e-39 164.5 196 44.9
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 2.6e-38 162.9 189 44.4
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 3.0e-34 149.4 88 72.7
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 1.7e-32 143.7 201 40.3
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 1.6e-30 137.1 73 82.2
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 5.0e-29 132.1 110 63.6
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 3.2e-28 129.4 141 48.9
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 6.8e-26 121.7 73 79.5
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 2.2e-24 116.7 82 69.5
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 8.5e-21 104.8 116 52.6
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 2.8e-16 89.7 69 62.3
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 1.8e-15 87.0 56 69.6
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 7.7e-14 81.6 54 74.1
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 7.7e-14 81.6 66 63.6
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 4.0e-10 69.3 58 60.3
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 1.2e-09 67.8 35 80.0
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 1.1e-07 61.2 35 65.7
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 7.0e-07 58.5 40 70.0
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 7.0e-07 58.5 53 64.2


User provided reference genes

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