Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2631 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1188.3 681 100.0
FvH4_5g12492 Fragaria vesca HOM05D004837 ORTHO05D005741 0.0e+00 1143.6 681 94.6
FAN18G2885 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1139.4 681 94.3
FAN18G2415 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1115.9 730 88.1
RcHm_v2.0_Chr7g0184861 Rosa chinensis HOM05D004837 ORTHO05D005741 0.0e+00 1112.1 681 90.5
FAN04G0597 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1109.0 681 92.4
Prupe.8G104400 Prunus persica HOM05D004837 ORTHO05D005741 6.0e-310 1067.0 680 86.2
MD10G1081900 Malus domestica HOM05D004837 ORTHO05D005741 5.8e-305 1050.4 680 84.7
Thecc.03G030500 Theobroma cacao HOM05D004837 ORTHO05D005741 3.7e-299 1031.2 680 85.9
Actinidia35081 Actinidia chinensis HOM05D004837 ORTHO05D005741 1.8e-298 1028.9 681 84.4
CSS0011479 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 5.3e-298 1027.3 681 82.7
CSS0007108 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 5.8e-297 1023.8 681 82.5
CiPaw.15G128500 Carya illinoinensis HOM05D004837 ORTHO05D005741 2.2e-296 1021.9 677 82.9
Cfa019797 Carpinus fangiana HOM05D004837 ORTHO05D005741 3.9e-293 1011.1 680 81.3
Atru.chr9.792 Acer truncatum HOM05D004837 ORTHO05D005741 6.7e-293 1010.4 681 81.5
Potri.012G061000 Populus trichocarpa HOM05D004837 ORTHO05D005741 4.3e-292 1007.7 680 82.1
TWI15G0076 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 5.7e-292 1007.3 680 81.6
Gorai.006G062600 Gossypium raimondii HOM05D004837 ORTHO05D005741 3.7e-291 1004.6 676 82.0
ClCG03G012520 Citrullus lanatus HOM05D004837 ORTHO05D005741 4.1e-290 1001.1 682 80.6
Gohir.A09G047000 Gossypium hirsutum HOM05D004837 ORTHO05D005741 5.3e-290 1000.7 676 81.7
CANSAT80G2884 Cannabis sativa HOM05D004837 ORTHO05D005741 1.2e-289 999.6 682 80.4
Gohir.D09G047500 Gossypium hirsutum HOM05D004837 ORTHO05D005741 2.0e-289 998.8 676 81.7
CSS0025722 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 1.7e-288 995.7 680 81.2
TWI81G0923 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 1.7e-288 995.7 680 80.6
COL.COLO4_16258 Corchorus olitorius HOM05D004837 ORTHO05D005741 5.0e-288 994.2 680 81.0
Ciclev10019149m.g Citrus clementina HOM05D004837 ORTHO05D005741 6.5e-288 993.8 680 80.4
Manes.05G138800 Manihot esculenta HOM05D004837 ORTHO05D005741 6.5e-288 993.8 682 81.5
Manes.01G012900 Manihot esculenta HOM05D004837 ORTHO05D005741 8.4e-288 993.4 682 81.4
Lj2g0006103 Lotus japonicus HOM05D004837 ORTHO05D005741 7.1e-287 990.3 680 82.4
THA.LOC104821845 Tarenaya hassleriana HOM05D004837 ORTHO05D005741 6.1e-286 987.3 681 79.6
AT3G18480 Arabidopsis thaliana HOM05D004837 ORTHO05D005741 3.0e-285 984.9 686 78.3
CsaV3_1G043510 Cucumis sativus L. HOM05D004837 ORTHO05D005741 5.1e-285 984.2 683 79.8
HanXRQChr17g0558331 Helianthus annuus HOM05D004837 ORTHO05D005741 1.5e-284 982.6 688 78.9
Carub.0003s1824 Capsella rubella HOM05D004837 ORTHO05D005741 1.9e-284 982.2 688 80.4
Aa31LG8G5290 Aethionema arabicum HOM05D004837 ORTHO05D005741 3.3e-284 981.5 689 78.1
AL3G31770 Arabidopsis lyrata HOM05D004837 ORTHO05D005741 3.3e-284 981.5 686 77.7
Lj5C146T15 Lonicera japonica HOM05D004837 ORTHO05D005741 5.7e-284 980.7 655 81.8
PSO063G6385 Papaver somniferum HOM05D004837 ORTHO05D005741 9.7e-284 979.9 665 79.8
PSO782G0716 Papaver somniferum HOM05D004837 ORTHO05D005741 2.2e-283 978.8 665 80.0
Medtr8g103950 Medicago truncatula HOM05D004837 ORTHO05D005741 2.8e-283 978.4 682 79.5
TAR629G1790 Trochodendron aralioides HOM05D004837 ORTHO05D005741 3.7e-283 978.0 682 78.6
GSVIVG01008258001 Vitis vinifera HOM05D004837 ORTHO05D005741 8.2e-283 976.9 668 80.4
CARHR093830 Cardamine hirsuta HOM05D004837 ORTHO05D005741 1.4e-282 976.1 690 79.6
Thhalv10020192m.g Eutrema salsugineum HOM05D004837 ORTHO05D005741 3.1e-282 974.9 688 77.6
vmacro23526 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 5.3e-282 974.2 742 73.6
vmacro16451 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 1.2e-281 973.0 742 73.6
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea HOM05D004837 ORTHO05D005741 1.5e-281 972.6 680 79.6
ECA233G3214 Erigeron canadensis HOM05D004837 ORTHO05D005741 4.5e-281 971.1 668 79.0
Glyma.07G089600 Glycine max HOM05D004837 ORTHO05D005741 7.7e-281 970.3 677 79.9
Lsat_1_v5_gn_8_147101 Lactuca sativa HOM05D004837 ORTHO05D005741 2.2e-280 968.8 682 77.7
QL10p023827 Quercus lobata HOM05D004837 ORTHO05D005741 2.2e-280 968.8 677 80.6
BcaB06g25891 Brassica carinata HOM05D004837 ORTHO05D005741 5.0e-280 967.6 686 81.5
Sed0018155 Sechium edule HOM05D004837 ORTHO05D005741 6.5e-280 967.2 683 78.3
Lalb_Chr22g0352981 Lupinus albus HOM05D004837 ORTHO05D005741 8.5e-280 966.8 678 79.8
BolC5t33444H Brassica oleracea HOM05D004837 ORTHO05D005741 3.2e-279 964.9 688 77.0
Cpa.g.sc13.20 Carica papaya HOM05D004837 ORTHO05D005741 4.2e-279 964.5 685 79.7
BcaB04g20769 Brassica carinata HOM05D004837 ORTHO05D005741 9.4e-279 963.4 682 81.1
Solyc06g069210.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 2.1e-278 962.2 681 77.8
Glyma.09G187100 Glycine max HOM05D004837 ORTHO05D005741 2.7e-278 961.8 677 79.2
Sopen06g026470 Solanum pennellii HOM05D004837 ORTHO05D005741 2.7e-278 961.8 681 80.0
BolC1t04537H Brassica oleracea HOM05D004837 ORTHO05D005741 3.6e-278 961.4 686 78.9
Rhsim12G0143900 Rhododendron simsii HOM05D004837 ORTHO05D005741 4.6e-278 961.1 653 80.6
C01p45740 Brassica napus HOM05D004837 ORTHO05D005741 1.4e-277 959.5 686 80.2
Duzib084G1378 Durio zibethinus HOM05D004837 ORTHO05D005741 3.9e-277 958.0 680 78.5
BcaC09g48805 Brassica carinata HOM05D004837 ORTHO05D005741 5.1e-277 957.6 686 80.0
A01p35930 Brassica napus HOM05D004837 ORTHO05D005741 1.1e-276 956.4 685 80.9
Aqoxy3G03933 Aquilegia oxysepala HOM05D004837 ORTHO05D005741 1.5e-276 956.1 658 79.8
Ca_25454_v3 Cicer arietinum L. HOM05D004837 ORTHO05D005741 1.7e-275 952.6 684 77.3
Eucgr.B00707 Eucalyptus grandis HOM05D004837 ORTHO05D005741 2.4e-274 948.7 679 78.4
Sp3g16570 Schrenkiella parvula HOM05D004837 ORTHO05D005741 1.5e-273 946.0 687 77.9
Lalb_Chr24g0397611 Lupinus albus HOM05D004837 ORTHO05D005741 5.9e-273 944.1 678 78.2
Phvul.004G160100 Phaseolus vulgaris HOM05D004837 ORTHO05D005741 5.9e-273 944.1 682 79.2
C05p47190 Brassica napus HOM05D004837 ORTHO05D005741 2.2e-272 942.2 688 75.7
Nn4g23774 Nelumbo nucifera HOM05D004837 ORTHO05D005741 2.9e-272 941.8 682 75.8
BcaC05g28614 Brassica carinata HOM05D004837 ORTHO05D005741 6.5e-272 940.6 688 75.6
BraA01t03672Z Brassica rapa HOM05D004837 ORTHO05D005741 8.5e-272 940.3 716 77.4
Lj4g0025474 Lotus japonicus HOM05D004837 ORTHO05D005741 8.5e-272 940.3 678 78.0
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea HOM05D004837 ORTHO05D005741 1.1e-271 939.9 726 73.3
DCAR_004539 Daucus carota HOM05D004837 ORTHO05D005741 4.2e-271 937.9 679 75.8
TPR.G21711 Trifolium pratense HOM05D004837 ORTHO05D005741 2.7e-270 935.3 660 78.6
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea HOM05D004837 ORTHO05D005741 6.1e-270 934.1 726 72.9
A05p31170 Brassica napus HOM05D004837 ORTHO05D005741 1.4e-269 932.9 687 78.5
BraA05t21958Z Brassica rapa HOM05D004837 ORTHO05D005741 1.4e-269 932.9 687 78.5
Peaxi162Scf00013g00943 Petunia axillaris HOM05D004837 ORTHO05D005741 3.8e-264 914.8 655 79.5
VMungo0464G1696 Vigna mungo HOM05D004837 ORTHO05D005741 1.6e-262 909.4 682 80.1
PGR083G0937 Punica granatum HOM05D004837 ORTHO05D005741 1.3e-259 899.8 680 74.0
SGA_v2.0_scaffold10G05151 Striga asiatica HOM05D004837 ORTHO05D005741 1.2e-257 893.3 682 74.0
Migut.M00003 Erythranthe guttata HOM05D004837 ORTHO05D005741 3.5e-257 891.7 682 73.5
Sabra12G0044300 Salix brachista HOM05D004837 ORTHO05D005741 5.9e-257 891.0 688 75.1
Cc04_g07300 Coffea canephora HOM05D004837 ORTHO05D005741 8.5e-256 887.1 681 73.6
unitig_37.g12022 Utricularia gibba HOM05D004837 ORTHO05D005741 1.5e-255 886.3 677 71.6
MSTRG.14939 Avicennia marina HOM05D004837 ORTHO05D005741 1.9e-255 885.9 679 72.8
Haze_18623 Corylus avellana HOM05D004837 ORTHO05D005741 1.6e-254 882.9 1030 54.3
Nitab4.5_0010565g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 2.6e-252 875.5 729 69.7
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 4.4e-252 874.8 631 77.2
MBI13_g10043_MAGBIO Magnolia biondii HOM05D004837 ORTHO05D005741 5.7e-252 874.4 679 72.5
Ah.02g115350 Amaranthus hybridus HOM05D004837 ORTHO05D005741 1.0e-248 863.6 679 71.7
Dinv40420 Davidia involucrata HOM05D004837 ORTHO05D005741 9.4e-247 857.1 568 83.3
AUR62029852 Chenopodium quinoa HOM05D004837 ORTHO05D005741 2.7e-246 855.5 679 71.9
Nitab4.5_0001432g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 3.6e-246 855.1 713 69.8
AUR62025880 Chenopodium quinoa HOM05D004837 ORTHO05D005741 5.2e-245 851.3 679 71.9
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea HOM05D004837 ORTHO05D005741 1.5e-244 849.7 680 72.5
EL10Ac5g11426 Beta vulgaris HOM05D004837 ORTHO05D005741 2.6e-244 849.0 681 71.4
Hund02403 Selenicereus undatus HOM05D004837 ORTHO05D005741 2.5e-239 832.4 618 75.6
Nitab4.5_0008699g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 6.1e-238 827.8 734 66.9
CDE11G0344 Ceratophyllum demersum HOM05D004837 ORTHO05D005741 6.8e-237 824.3 647 71.9
Nitab4.5_0001599g0070 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.5e-236 823.2 719 67.5
Os03g0710900 Oryza sativa ssp. japonica HOM05D004837 ORTHO05D005741 1.5e-236 823.2 670 69.1
Zm00001eb216420 Zea mays HOM05D004837 ORTHO05D005741 8.0e-230 800.8 695 65.9
HPP92_013262 Vanilla planifolia HOM05D004837 ORTHO05D005741 7.5e-228 794.3 665 66.8
ATR0021G039 Amborella trichopoda HOM05D004837 ORTHO05D005741 8.3e-227 790.8 685 66.1
SEGI_01686 Sequoiadendron giganteum HOM05D004837 ORTHO05D005741 7.8e-225 784.3 656 67.5
Oeu016160.3 Olea europaea HOM05D004837 ORTHO05D005741 4.6e-209 731.9 703 64.7
Mapoly0091s0053 Marchantia polymorpha HOM05D004837 ORTHO05D005741 1.0e-208 730.7 651 64.4
Psat7g012560 Pisum sativum HOM05D004837 ORTHO05D005741 1.2e-201 707.2 545 74.3
Pp3c3_5600 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.7e-200 703.4 668 60.8
SMO147G0276 Selaginella moellendorffii HOM05D004837 ORTHO05D005741 1.7e-200 703.4 665 60.3
Pp3c25_10040 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.2e-193 680.6 682 58.1
PGSC0003DMG400004053 Solanum tuberosum HOM05D004837 ORTHO05D005741 2.0e-156 557.0 419 79.0
CBR_g38539 Chara braunii HOM05D004837 ORTHO05D005741 7.9e-153 545.0 680 49.3
MELO3C015107.2 Cucumis melo HOM05D004837 ORTHO05D005741 2.4e-149 533.5 397 76.6
Actinidia31023 Actinidia chinensis HOM05D004837 ORTHO05D005741 1.2e-145 521.2 368 76.4
HPP92_013216 Vanilla planifolia HOM05D004837 ORTHO05D005741 8.6e-123 445.3 307 73.6
AagrBONN_evm.TU.Sc2ySwM_228.1000 Anthoceros agrestis HOM05D004837 ORTHO05D005741 3.6e-121 439.9 569 49.7
CAN.G423.1 Capsicum annuum HOM05D004837 ORTHO05D005741 1.5e-98 364.8 417 58.0
Atru.chr9.1054 Acer truncatum HOM05D004837 ORTHO05D005741 7.6e-87 325.9 497 47.1
Atru.chr9.1055 Acer truncatum HOM05D004837 ORTHO05D005741 7.8e-84 315.8 506 46.6
Cre08.g382650 Chlamydomonas reinhardtii HOM05D004837 ORTHO05D005741 9.3e-77 292.4 708 31.8
HPP92_013215 Vanilla planifolia HOM05D004837 ORTHO05D005741 1.2e-76 292.0 269 65.1
Gorai.008G286000 Gossypium raimondii HOM05D004837 ORTHO05D005741 1.9e-53 214.9 556 34.5
MELO3C029547.2 Cucumis melo HOM05D004837 ORTHO05D005741 8.7e-51 206.1 185 65.4
Prupe.8G103800 Prunus persica HOM05D004837 ORTHO05D005741 9.7e-50 202.6 770 31.0
Gohir.D12G266250 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.0e-46 192.6 152 70.4
CAN.G587.83 Capsicum annuum HOM05D004837 ORTHO05D005741 6.5e-46 189.9 124 80.6
SHI30382 Sapria himalayana HOM05D004837 ORTHO05D005741 3.6e-44 184.1 121 81.0
Nitab4.5_0010701g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 8.5e-38 162.9 94 88.3
PRCOL_00005675 Prasinoderma coloniale HOM05D004837 ORTHO05D005741 9.7e-34 149.4 604 30.5
Ah.11g042150 Amaranthus hybridus HOM05D004837 ORTHO05D005741 8.0e-28 129.8 93 78.5
Cfa021462 Carpinus fangiana HOM05D004837 ORTHO05D005741 8.5e-22 109.8 677 22.5
Solyc03g119670.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 2.0e-18 98.6 71 74.6
BcaC07g39700 Brassica carinata HOM05D004837 ORTHO05D026816 7.7e-15 86.7 109 54.1
MCO10G228 Micromonas commoda HOM05D004837 ORTHO05D005741 8.6e-14 83.2 692 22.1
BolC8t50465H Brassica oleracea HOM05D004837 ORTHO05D005741 5.5e-13 80.5 82 61.0
Actinidia31022 Actinidia chinensis HOM05D004837 ORTHO05D005741 7.5e-10 70.1 195 36.4
Psat7g009760 Pisum sativum HOM05D004837 ORTHO05D005741 9.8e-10 69.7 43 74.4
DCAR_013034 Daucus carota HOM05D004837 ORTHO05D005741 2.2e-09 68.6 54 68.5
C08p28590 Brassica napus HOM05D004837 ORTHO05D005741 2.8e-09 68.2 82 57.3


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