Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2583 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-158 563.1 281 100.0
FvH4_5g34730 Fragaria vesca HOM05D003861 ORTHO05D003172 6.3e-104 381.3 304 70.1
FAN18G1278 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.9e-103 377.9 304 69.1
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 8.5e-101 370.9 301 67.1
FAN27G0961 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-94 350.1 306 65.7
FAN21G2358 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.1e-87 325.5 250 70.0
FAN18G3027 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-85 320.5 270 68.1
FAN23G1712 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-84 315.8 228 74.1
FAN04G1737 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-78 297.4 276 60.9
FAN06G0363 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.5e-78 295.4 300 57.3
FAN15G3220 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.2e-77 293.1 251 66.5
FAN11G3742 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.7e-75 285.4 229 68.6
FAN20G0681 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.9e-70 268.5 299 52.2
FAN19G2996 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-64 249.6 215 64.2
FAN12G1889 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.1e-63 246.1 193 72.0
FAN17G1023 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.0e-63 245.0 154 86.4
FAN14G1188 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.5e-62 242.3 253 55.3
FAN27G1601 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.3e-58 229.9 220 59.1
FAN05G4694 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.6e-54 215.7 228 55.3
FAN10G0202 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.3e-52 209.1 234 53.8
FvH4_6g38832 Fragaria vesca HOM05D003861 ORTHO05D003172 2.1e-51 206.8 224 55.4
FAN16G2032 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.1e-47 192.6 234 51.7
FAN05G0284 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.9e-45 186.0 238 52.1
FAN13G1085 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-44 183.7 99 94.9
FAN28G1231 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.6e-44 182.2 298 38.9
FAN05G2260 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-43 180.3 298 38.6
FAN08G0030 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-43 180.3 298 38.6
FAN18G3238 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-43 180.3 298 38.6
FAN20G1736 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-43 180.3 298 38.6
FAN24G3411 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-43 180.3 298 38.6
FAN06G2497 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-43 179.9 298 38.6
FAN05G0636 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.1e-43 178.3 298 38.3
FAN11G3391 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.1e-43 178.3 298 38.3
FAN05G5297 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-42 177.9 298 38.3
FAN20G2009 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-42 177.9 298 38.3
FAN08G0306 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-42 177.6 298 38.3
FAN21G1384 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-42 177.6 298 37.2
FAN14G5172 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.3e-42 176.8 115 83.5
FAN26G2524 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.1e-42 176.4 298 38.3
FAN19G1774 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.0e-42 176.0 298 37.9
FAN20G3207 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.2e-42 175.6 298 38.3
FAN04G0957 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-41 174.5 283 38.9
FAN18G0257 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.0e-41 173.7 298 37.6
FAN12G0494 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-40 170.6 298 37.2
FvH4_4g24130 Fragaria vesca HOM05D003861 ORTHO05D003172 2.2e-40 170.2 260 41.9
FAN20G0880 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.9e-40 169.1 109 83.5
FAN25G1915 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-38 162.9 284 38.0
FAN06G2077 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.0e-37 161.4 266 39.1
FAN19G1462 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.0e-37 161.4 283 41.0
FAN25G3807 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.0e-37 161.4 266 39.1
FvH4_7g07670 Fragaria vesca HOM05D003861 ORTHO05D003172 1.1e-36 157.9 270 38.5
FAN06G2716 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-36 157.5 276 38.0
FAN15G3175 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.3e-36 155.2 105 84.8
FvH4_5g21900 Fragaria vesca HOM05D003861 ORTHO05D003172 4.9e-32 142.5 152 52.0
FAN01G2986 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-31 141.4 256 37.1
FAN22G1234 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.3e-28 129.8 277 33.2
FAN10G3556 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.6e-28 128.3 98 73.5
FAN25G0014 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.1e-27 125.2 258 36.0
FvH4_4g11860 Fragaria vesca HOM05D003861 ORTHO05D003172 1.1e-26 124.8 209 38.8
FvH4_4g07540 Fragaria vesca HOM05D003861 ORTHO05D003172 1.8e-26 124.0 209 38.3
FAN09G4198 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-25 121.3 275 32.4
FAN10G2421 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-25 121.3 283 33.6
FAN19G0585 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-25 120.9 162 45.1
FAN01G2695 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.0e-25 120.6 282 33.7
FAN12G1335 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.6e-25 120.2 209 37.8
FAN20G0509 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.4e-25 119.8 162 44.4
FAN09G3129 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.4e-25 119.4 113 65.5
FAN09G4336 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.4e-25 119.4 113 65.5
FAN21G0339 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.8e-25 119.0 226 38.1
FvH4_4g14180 Fragaria vesca HOM05D003861 ORTHO05D003172 9.9e-25 118.2 162 43.8
RcHm_v2.0_Chr1g0362621 Rosa chinensis HOM05D000234 ORTHO05D000335 2.2e-24 117.1 149 48.3
FvH4_5g15962 Fragaria vesca HOM05D003861 ORTHO05D003172 4.9e-24 115.9 274 32.8
FAN17G0620 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.9e-24 115.9 180 42.2
FAN11G4039 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.4e-24 115.2 152 51.3
FAN26G3319 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-23 114.4 163 42.9
FAN05G1504 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.3e-23 111.7 162 43.2
FAN12G1269 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.6e-22 109.4 162 44.4
FAN25G0615 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.0e-21 106.7 113 60.2
FAN16G0131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.6e-20 102.4 202 36.6
FAN28G2185 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.6e-20 102.4 167 41.3
FAN10G4063 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.6e-19 99.8 142 43.7
FAN21G1959 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.6e-19 99.8 194 36.6
FAN16G2139 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.2e-19 99.0 60 78.3
FAN14G4213 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-18 97.8 312 30.4
FAN04G2066 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.0e-18 95.1 171 37.4
FAN10G3738 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.0e-18 95.1 60 73.3
FAN25G1362 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.0e-18 95.1 120 45.8
FAN07G0085 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-17 94.4 98 49.0
FAN12G4080 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.5e-17 92.8 330 29.7
FAN23G2209 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.6e-17 92.0 165 38.8
FAN17G1628 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.9e-17 91.7 189 32.3
RcHm_v2.0_Chr7g0200361 Rosa chinensis HOM05D003861 ORTHO05D003172 1.7e-16 90.9 298 30.9
FAN09G3543 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-15 87.8 56 64.3
FAN09G4270 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-15 87.8 56 64.3
FAN27G3227 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-14 83.6 110 45.5
FAN02G2656 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.9e-14 82.0 167 31.7
FAN23G2667 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.7e-13 78.6 309 30.1
FAN24G1232 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.7e-13 78.6 333 27.6
FAN26G1201 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.7e-13 78.6 333 27.6
FAN03G0767 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-12 77.4 333 27.6
FAN04G1565 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-12 77.4 328 28.0
FAN16G3351 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-12 77.4 297 29.6
FAN16G1856 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.6e-12 75.9 183 33.3
FAN03G2787 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.4e-12 75.5 217 30.9
FAN10G4357 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.6e-12 75.1 114 34.2
FvH4_1g14871 Fragaria vesca HOM05D003861 ORTHO05D003172 1.6e-11 74.3 217 31.8
FvH4_7g08131 Fragaria vesca HOM05D003861 ORTHO05D003172 3.7e-11 73.2 110 41.8
FAN17G2131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-11 72.8 333 27.0
FAN03G1903 Fragaria x ananassa HOM05D008328 ORTHO05D003172 8.1e-11 72.0 309 28.5
FAN04G2765 Fragaria x ananassa HOM05D008328 ORTHO05D003172 8.1e-11 72.0 309 28.5
FAN20G1987 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.1e-11 72.0 215 30.2
FAN15G3561 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.1e-10 71.6 309 28.5
FAN19G2630 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.1e-10 71.6 308 28.9
FAN05G3353 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-10 71.2 309 28.5
FAN03G0943 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-10 70.9 323 26.9
FAN10G4036 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-10 70.9 309 28.5
FvH4_1g04631 Fragaria vesca HOM05D003861 ORTHO05D003172 2.4e-10 70.5 216 30.1
FAN04G2813 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.4e-10 70.5 308 28.6
FAN07G1974 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.1e-10 70.1 325 27.4
FvH4_4g12252 Fragaria vesca HOM05D003861 ORTHO05D003172 4.0e-10 69.7 215 30.2
FAN11G1400 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.0e-10 69.7 309 26.2
FAN27G0540 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.0e-10 69.7 309 28.8
FAN03G3146 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.9e-10 68.9 127 33.1
FAN09G0970 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.9e-10 68.9 309 28.2
FAN04G1029 Fragaria x ananassa HOM05D008328 ORTHO05D003172 9.0e-10 68.6 310 28.7
FAN02G3772 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-09 67.8 229 27.9
FAN04G0487 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.5e-09 67.8 316 28.5
FAN14G4484 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.0e-09 67.4 312 28.8
FAN08G2861 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.6e-09 67.0 316 28.8
FAN08G3244 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.4e-09 66.6 103 42.7
FAN14G4127 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.4e-09 66.6 326 26.1
DCAR_010251 Daucus carota HOM05D003861 ORTHO05D003172 7.6e-09 65.5 216 28.2
FAN06G1795 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.6e-09 65.5 116 33.6
FAN06G3254 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.9e-09 65.1 320 26.6
FAN14G0103 Fragaria x ananassa HOM05D008328 ORTHO05D003172 9.9e-09 65.1 310 25.8
FAN17G0616 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.9e-09 65.1 119 37.8
FAN05G4779 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-07 61.6 333 25.5
FAN03G2221 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-07 61.2 75 45.3
FAN06G0466 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-07 61.2 292 26.7
FAN09G2774 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.2e-07 59.7 272 28.3
FAN27G0919 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.2e-07 59.7 79 45.6
FAN14G1330 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.5e-07 59.3 284 28.2
FAN17G0371 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.5e-07 59.3 198 31.8
FAN07G1005 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.1e-07 58.9 219 30.1
FAN13G3107 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.2e-06 58.2 219 30.1
FAN05G2377 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.6e-06 57.8 219 30.1
FAN08G1145 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-06 57.8 195 29.2
FAN14G4732 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-06 57.8 183 32.2
FAN19G2410 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.6e-06 57.8 220 29.5
FAN06G1710 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-06 57.0 72 48.6
FAN10G3747 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-06 57.0 64 54.7
FAN11G1233 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.7e-06 57.0 219 29.7
FAN23G2374 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-06 57.0 273 25.3
FvH4_5g38071 Fragaria vesca HOM05D003861 ORTHO05D003172 3.5e-06 56.6 75 42.7
FAN20G1013 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.6e-06 56.2 100 38.0
FAN14G4695 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.0e-06 55.8 219 29.7
FAN17G2798 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.9e-06 55.5 219 29.7


User provided reference genes

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