Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2571 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.1e-113 413.7 268 100.0
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 6.1e-32 142.1 79 94.9
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.0e-31 141.4 75 98.7
FAN28G2052 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.0e-31 141.4 75 98.7
FAN01G2227 Fragaria x ananassa HOM05D002241 ORTHO05D002458 5.5e-25 119.0 84 83.3
FAN03G1835 Fragaria x ananassa HOM05D007506 ORTHO05D008409 6.1e-24 115.5 79 84.8
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 5.7e-22 109.0 87 75.9
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 6.6e-10 68.9 66 65.2
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 6.6e-10 68.9 58 62.1
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 1.1e-09 68.2 62 64.5
SEGI_39886 Sequoiadendron giganteum HOM05D007506 ORTHO05D008409 1.1e-09 68.2 62 58.1
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 4.3e-09 66.2 81 54.3
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 4.3e-09 66.2 53 67.9
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 4.3e-09 66.2 60 56.7
Aqoxy7G00781 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 2.8e-08 63.5 40 80.0
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 2.8e-08 63.5 61 60.7
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 2.8e-08 63.5 53 66.0
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 2.8e-08 63.5 56 62.5
Zm00001eb252110 Zea mays HOM05D000188 ORTHO05D003976 3.6e-08 63.2 70 52.9
Lalb_Chr06g0166331 Lupinus albus HOM05D007506 ORTHO05D008409 6.1e-08 62.4 53 62.3
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 6.1e-08 62.4 65 60.0
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 1.0e-07 61.6 56 60.7
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 1.8e-07 60.8 65 55.4
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.8e-07 60.8 73 50.7
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 1.8e-07 60.8 81 49.4
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 5.2e-07 59.3 38 73.7
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 5.2e-07 59.3 37 78.4
TPR.G2499 Trifolium pratense HOM05D007506 ORTHO05D008409 6.8e-07 58.9 52 65.4
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 8.9e-07 58.5 57 56.1
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 8.9e-07 58.5 64 54.7
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 8.9e-07 58.5 63 58.7
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 1.5e-06 57.8 53 60.4
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 1.5e-06 57.8 53 60.4
CsaV3_6G004310 Cucumis sativus L. HOM05D007506 ORTHO05D008409 2.0e-06 57.4 53 66.0
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 2.6e-06 57.0 63 54.0
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 2.6e-06 57.0 64 54.7
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 3.4e-06 56.6 52 57.7
ClCG08G008330 Citrullus lanatus HOM05D007506 ORTHO05D008409 3.4e-06 56.6 55 63.6
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 5.8e-06 55.8 38 63.2
MELO3C019903.2 Cucumis melo HOM05D007506 ORTHO05D008409 5.8e-06 55.8 55 63.6
Sabra10G0188200 Salix brachista HOM05D007506 ORTHO05D008409 5.8e-06 55.8 80 47.5
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 7.5e-06 55.5 61 57.4
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 9.8e-06 55.1 55 56.4
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 9.8e-06 55.1 53 60.4


User provided reference genes

Program Settings