Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2569 Fragaria x ananassa HOM05D002813 ORTHO05D046551 2.9e-100 368.6 196 100.0
FAN18G2427 Fragaria x ananassa HOM05D002813 ORTHO05D046551 3.5e-53 212.2 141 80.1
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-21 105.9 92 63.0
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 6.0e-21 105.1 92 63.0
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-20 104.0 92 62.0
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-20 103.6 80 68.8
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-19 98.6 80 61.2
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 8.2e-18 94.7 77 66.2
FAN14G4337 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-17 94.4 80 58.8
FvH4_6g10172 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-17 94.0 80 58.8
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-16 90.1 79 59.5
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-16 90.1 83 57.8
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 5.0e-15 85.5 74 58.1
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-15 85.5 74 58.1
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-14 84.3 64 64.1
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 1.4e-12 77.4 80 53.8
FAN15G1647 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-12 77.0 70 58.6
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 8.8e-12 74.7 75 53.3
FAN11G3977 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-11 73.2 75 52.0
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 1.3e-10 70.9 72 50.0
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 6.3e-10 68.6 72 48.6
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 1.8e-09 67.0 72 48.6
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-09 66.6 73 57.5
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 4.1e-09 65.9 75 49.3
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 9.1e-09 64.7 79 46.8
Ciclev10003718m.g Citrus clementina HOM05D002813 ORTHO05D003203 1.5e-08 63.9 73 45.2
FvH4_2g35530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-08 63.9 64 50.0
FAN21G3206 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-08 63.9 61 57.4
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.6e-08 63.2 120 35.8
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 4.5e-08 62.4 120 35.8
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 4.5e-08 62.4 120 35.8
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 4.5e-08 62.4 122 38.5
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 7.7e-08 61.6 65 46.2
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 7.7e-08 61.6 74 44.6
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 1.3e-07 60.8 64 50.0
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 2.9e-07 59.7 81 37.0
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 2.9e-07 59.7 94 36.2
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 3.8e-07 59.3 121 33.9
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 6.5e-07 58.5 79 43.0
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 8.5e-07 58.2 68 45.6
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.5e-07 58.2 58 55.2
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 1.4e-06 57.4 88 40.9
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 1.4e-06 57.4 73 42.5
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-06 57.4 58 55.2
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-06 57.4 210 29.5
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-06 57.4 58 55.2
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 1.4e-06 57.4 58 55.2
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 1.9e-06 57.0 89 38.2
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 2.5e-06 56.6 122 32.8
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 2.5e-06 56.6 114 33.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 5.5e-06 55.5 65 44.6


User provided reference genes

Program Settings