Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 6.9e-75 283.9 142 100.0
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 1.6e-71 272.7 139 97.8
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 4.6e-71 271.2 139 97.1
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.8e-67 259.2 139 93.5
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 1.8e-62 242.7 140 87.1
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 3.4e-58 228.4 140 82.1
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 8.5e-57 223.8 140 78.6
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.2e-56 221.9 113 95.6
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.1e-53 213.4 139 77.7
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 1.1e-53 213.4 140 77.9
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 3.3e-53 211.8 142 76.1
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 3.3e-53 211.8 141 75.9
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 4.3e-53 211.5 139 77.0
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 5.7e-53 211.1 141 75.2
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.3e-52 209.9 141 75.2
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 1.3e-52 209.9 140 77.1
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.6e-52 209.5 141 75.9
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 2.2e-52 209.1 139 76.3
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 2.8e-52 208.8 142 77.5
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 3.7e-52 208.4 142 75.4
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 8.2e-52 207.2 142 73.9
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 1.1e-51 206.8 144 74.3
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.1e-51 206.8 141 75.2
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 1.4e-51 206.5 139 74.8
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 1.4e-51 206.5 139 74.8
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 1.4e-51 206.5 143 74.1
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 1.8e-51 206.1 142 75.4
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 2.4e-51 205.7 142 74.6
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 3.1e-51 205.3 141 73.8
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 3.1e-51 205.3 138 74.6
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 3.1e-51 205.3 140 76.4
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 4.1e-51 204.9 141 73.8
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 5.3e-51 204.5 148 68.9
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 5.3e-51 204.5 141 75.2
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 6.9e-51 204.1 142 75.4
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 6.9e-51 204.1 142 75.4
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 1.5e-50 203.0 143 73.4
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 1.5e-50 203.0 139 75.5
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 2.0e-50 202.6 141 74.5
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 2.0e-50 202.6 140 72.9
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 2.0e-50 202.6 145 73.1
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 4.5e-50 201.4 142 73.2
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 4.5e-50 201.4 141 73.8
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 5.9e-50 201.1 141 74.5
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 5.9e-50 201.1 139 71.2
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 1.0e-49 200.3 141 75.9
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 1.3e-49 199.9 143 74.1
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 1.7e-49 199.5 142 71.1
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 2.9e-49 198.7 130 79.2
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 3.8e-49 198.4 139 74.1
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 5.0e-49 198.0 139 74.8
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 1.1e-48 196.8 143 72.0
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 1.4e-48 196.4 142 71.8
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 1.4e-48 196.4 137 74.5
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 1.4e-48 196.4 148 68.9
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.9e-48 196.1 141 71.6
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 2.5e-48 195.7 141 70.2
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 3.2e-48 195.3 109 87.2
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 3.2e-48 195.3 139 73.4
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 3.2e-48 195.3 139 73.4
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.2e-48 194.9 142 71.8
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 5.5e-48 194.5 143 71.3
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 7.2e-48 194.1 132 75.0
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 7.2e-48 194.1 141 72.3
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.2e-47 193.4 142 71.8
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 1.2e-47 193.4 138 73.9
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 1.6e-47 193.0 141 71.6
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 2.1e-47 192.6 139 71.9
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 2.1e-47 192.6 138 73.2
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 2.7e-47 192.2 144 70.1
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 2.7e-47 192.2 144 70.1
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 2.7e-47 192.2 146 67.8
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 3.6e-47 191.8 128 76.6
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 3.6e-47 191.8 142 70.4
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 4.6e-47 191.4 111 84.7
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 6.1e-47 191.0 138 71.7
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 1.0e-46 190.3 138 72.5
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 1.8e-46 189.5 145 66.9
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.8e-46 189.5 142 69.7
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 2.3e-46 189.1 144 68.1
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 2.3e-46 189.1 144 68.1
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 2.3e-46 189.1 141 69.5
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 3.0e-46 188.7 141 70.9
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 3.9e-46 188.3 141 70.9
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 5.1e-46 188.0 144 68.1
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 6.7e-46 187.6 162 63.6
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 8.8e-46 187.2 144 67.4
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 8.8e-46 187.2 138 69.6
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 8.8e-46 187.2 141 70.2
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 1.1e-45 186.8 142 69.0
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 1.1e-45 186.8 140 70.0
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 1.5e-45 186.4 137 70.1
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 1.5e-45 186.4 142 66.2
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 2.0e-45 186.0 134 73.1
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 3.3e-45 185.3 141 66.7
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 3.3e-45 185.3 142 66.9
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 3.3e-45 185.3 143 67.8
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 3.3e-45 185.3 142 66.9
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 4.4e-45 184.9 122 77.9
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 5.7e-45 184.5 146 66.4
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 5.7e-45 184.5 146 66.4
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 5.7e-45 184.5 146 66.4
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 9.7e-45 183.7 111 80.2
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 1.3e-44 183.3 135 69.6
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 1.7e-44 183.0 141 66.7
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 2.2e-44 182.6 144 66.7
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 3.7e-44 181.8 142 66.9
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 4.8e-44 181.4 145 66.9
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 6.3e-44 181.0 170 57.1
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 1.1e-43 180.3 133 68.4
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 1.1e-43 180.3 144 66.7
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 1.8e-43 179.5 145 65.5
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 2.4e-43 179.1 168 58.9
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.4e-43 179.1 114 78.1
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 3.1e-43 178.7 111 78.4
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 4.1e-43 178.3 140 67.1
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 9.1e-43 177.2 109 78.9
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 1.5e-42 176.4 218 49.5
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 5.9e-42 174.5 117 75.2
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 1.7e-41 172.9 111 75.7
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 2.2e-41 172.6 120 70.0
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 1.1e-40 170.2 88 93.2
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 2.7e-39 165.6 87 90.8
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 4.7e-39 164.9 87 92.0
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 1.1e-37 160.2 108 73.1
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 1.1e-37 160.2 96 81.2
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.4e-37 158.3 202 49.0
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 5.7e-37 157.9 105 75.2
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 1.1e-32 143.7 101 73.3
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.3e-28 130.2 137 51.8
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 4.8e-28 128.3 98 68.4
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 4.1e-27 125.2 104 64.4
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 1.6e-26 123.2 118 55.9
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 6.5e-25 117.9 144 52.8
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 2.5e-24 115.9 61 93.4
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 3.0e-22 109.0 105 53.3
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 9.8e-21 104.0 58 87.9
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 2.0e-18 96.3 86 51.2
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 5.9e-18 94.7 99 53.5
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 5.9e-18 94.7 87 58.6
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 4.7e-15 85.1 65 67.7
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 5.2e-14 81.6 141 39.0
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 2.8e-12 75.9 103 35.9
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 4.1e-11 72.0 60 56.7
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 7.0e-11 71.2 89 46.1
RcHm_v2.0_Chr3g0484351 Rosa chinensis HOM05D004802 ORTHO05D005591 7.0e-11 71.2 52 67.3
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 1.7e-09 66.6 63 58.7
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 2.8e-07 59.3 88 42.0
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 4.7e-07 58.5 34 82.4
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 6.8e-06 54.7 43 62.8
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 6.8e-06 54.7 43 62.8
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 6.8e-06 54.7 99 41.4


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