Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2289 Fragaria x ananassa HOM05D001828 ORTHO05D009885 5.5e-32 140.2 64 100.0
FAN28G0217 Fragaria x ananassa HOM05D029018 ORTHO05D009885 2.0e-29 131.7 63 93.7
FAN07G1979 Fragaria x ananassa HOM05D029018 ORTHO05D009885 3.7e-28 127.5 62 90.3
Atru.chr10.43 Acer truncatum HOM05D001828 ORTHO05D001745 1.0e-25 119.4 63 85.7
Atru.chr9.1 Acer truncatum HOM05D001828 ORTHO05D001745 1.0e-25 119.4 63 85.7
Atru.chr9.218 Acer truncatum HOM05D001828 ORTHO05D001745 1.0e-25 119.4 63 85.7
Atru.chr10.37 Acer truncatum HOM05D001828 ORTHO05D001745 1.3e-25 119.0 62 87.1
FAN25G1010 Fragaria x ananassa HOM05D008177 ORTHO05D010128 3.6e-23 110.9 62 80.6
ScUNg0000970 Simmondsia chinensis HOM05D007167 ORTHO05D009885 5.7e-21 103.6 63 76.2
EL10As7g23711 Beta vulgaris HOM05D001828 ORTHO05D001745 8.3e-20 99.8 62 74.2
unitig_676.g29551 Utricularia gibba HOM05D001029 ORTHO05D000917 7.0e-19 96.7 63 74.6
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 5.0e-17 90.5 45 91.1
EL10Ac2g03013 Beta vulgaris HOM05D001828 ORTHO05D001745 1.1e-16 89.4 63 66.7
QL02p029509 Quercus lobata HOM05D001828 ORTHO05D001745 1.9e-16 88.6 45 88.9
QL04p056327 Quercus lobata HOM05D001828 ORTHO05D009885 3.3e-16 87.8 45 86.7
QL02p004526 Quercus lobata HOM05D001828 ORTHO05D001745 7.3e-16 86.7 44 88.6
QL02p029498 Quercus lobata HOM05D001828 ORTHO05D001745 9.5e-16 86.3 45 86.7
unitig_135.g35493 Utricularia gibba HOM05D001029 ORTHO05D009885 1.6e-15 85.5 54 75.9
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 4.7e-15 84.0 54 74.1
CSS0027849 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 6.2e-15 83.6 44 86.4
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 1.8e-14 82.0 45 84.4
arahy.Tifrunner.gnm1.ann1.V6U7IH Arachis hypogaea HOM05D001828 ORTHO05D001745 1.8e-14 82.0 45 84.4
arahy.Tifrunner.gnm1.ann1.B2M0SA Arachis hypogaea HOM05D001828 ORTHO05D001745 4.0e-14 80.9 45 84.4
arahy.Tifrunner.gnm1.ann1.HA5ZC6 Arachis hypogaea HOM05D001828 ORTHO05D009885 5.2e-14 80.5 45 82.2
CSS0048211 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D009885 6.8e-14 80.1 44 81.8
QL93p0381_0031 Quercus lobata HOM05D007855 ORTHO05D003704 6.8e-14 80.1 45 82.2
QL93p0428_0015 Quercus lobata HOM05D001828 ORTHO05D009885 6.8e-14 80.1 45 82.2
PGSC0003DMG400044276 Solanum tuberosum HOM05D001828 ORTHO05D001745 6.8e-14 80.1 44 84.1
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 1.5e-13 79.0 45 77.8
CSS0030230 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 7.5e-13 76.6 44 79.5
CSS0047713 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 9.8e-13 76.3 44 79.5
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 2.2e-12 75.1 48 68.8
CDE02G0001 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 2.2e-12 75.1 44 75.0
CDE02G2883 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 2.2e-12 75.1 44 75.0
CDE02G3303 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 2.2e-12 75.1 44 75.0
Medtr0055s0130 Medicago truncatula HOM05D001828 ORTHO05D001745 8.3e-12 73.2 46 73.9
Oeu006837.1 Olea europaea HOM05D001828 ORTHO05D001745 3.2e-11 71.2 42 76.2
Duzib217G0002 Durio zibethinus HOM05D001828 ORTHO05D001745 9.2e-11 69.7 47 68.1
LjContig00371g0019658 Lotus japonicus HOM05D001828 ORTHO05D000917 9.2e-11 69.7 37 83.8
LjContig00372g0002420 Lotus japonicus HOM05D001828 ORTHO05D000917 9.2e-11 69.7 37 83.8
Duzib250G0005 Durio zibethinus HOM05D001828 ORTHO05D001745 1.2e-10 69.3 47 66.0
PGSC0003DMG400035737 Solanum tuberosum HOM05D001828 ORTHO05D001745 1.2e-10 69.3 38 84.2
Psat3g188680 Pisum sativum HOM05D003608 ORTHO05D010128 2.0e-10 68.6 35 88.6
Thhalv10028070m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 4.6e-10 67.4 42 71.4
Sopen07g009460 Solanum pennellii HOM05D003608 ORTHO05D010452 7.8e-10 66.6 48 64.6
Medtr5g031940 Medicago truncatula HOM05D001828 ORTHO05D009885 3.0e-09 64.7 42 71.4
Sc06g0003810 Simmondsia chinensis HOM05D007167 ORTHO05D009885 1.9e-08 62.0 45 64.4
Sopen00g005120 Solanum pennellii HOM05D000691 ORTHO05D000378 1.9e-08 62.0 53 54.7
Sc06g0003800 Simmondsia chinensis HOM05D001828 ORTHO05D009885 5.6e-08 60.5 35 82.9
unitig_807.g34420 Utricularia gibba HOM05D001029 ORTHO05D009885 9.5e-08 59.7 64 56.2
PGSC0003DMG400044154 Solanum tuberosum HOM05D001828 ORTHO05D009885 6.2e-07 57.0 42 64.3
QL93p0473_0014 Quercus lobata HOM05D029018 ORTHO05D050626 1.4e-06 55.8 57 47.4


User provided reference genes

Program Settings