Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.2e-82 308.5 172 100.0
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 8.7e-48 194.1 184 62.0
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 8.1e-46 187.6 146 71.2
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 1.1e-45 187.2 170 62.4
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 4.0e-45 185.3 170 62.9
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 4.0e-45 185.3 146 72.6
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.2e-44 183.7 170 61.8
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 4.8e-38 161.8 133 67.7
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 6.2e-38 161.4 151 55.6
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 7.6e-36 154.5 147 53.7
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 7.6e-36 154.5 147 54.4
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 4.9e-35 151.8 147 54.4
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 1.1e-34 150.6 148 54.1
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 2.5e-34 149.4 170 52.4
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 2.1e-33 146.4 147 50.3
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 3.5e-33 145.6 156 52.6
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 1.3e-32 143.7 169 50.3
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 1.8e-32 143.3 147 49.0
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 3.0e-32 142.5 147 55.1
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 1.9e-31 139.8 141 50.4
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 2.5e-31 139.4 148 59.5
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 3.3e-31 139.0 148 50.0
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 5.7e-31 138.3 147 51.7
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 5.7e-31 138.3 146 50.7
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 7.4e-31 137.9 149 49.7
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 7.4e-31 137.9 104 63.5
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 1.6e-30 136.7 139 51.1
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 2.2e-30 136.3 155 49.0
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 3.1e-29 132.5 147 57.8
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 4.1e-29 132.1 136 53.7
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 9.0e-29 131.0 74 77.0
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 1.2e-28 130.6 62 95.2
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 1.2e-28 130.6 168 43.5
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 1.2e-28 130.6 146 52.1
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 1.5e-28 130.2 77 74.0
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 1.5e-28 130.2 147 55.8
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 2.0e-28 129.8 147 44.9
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 2.6e-28 129.4 147 51.0
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 3.4e-28 129.0 95 64.2
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 1.0e-27 127.5 134 50.7
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 1.0e-27 127.5 139 48.9
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 1.3e-27 127.1 112 58.9
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 1.7e-27 126.7 168 47.6
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 2.9e-27 125.9 97 62.9
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 3.8e-27 125.6 93 62.4
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 5.0e-27 125.2 91 62.6
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 5.0e-27 125.2 100 62.0
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 5.0e-27 125.2 156 51.3
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 6.5e-27 124.8 146 46.6
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 8.5e-27 124.4 144 53.5
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 1.1e-26 124.0 157 46.5
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 3.2e-26 122.5 146 47.3
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 5.5e-26 121.7 103 60.2
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 7.2e-26 121.3 77 68.8
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 2.1e-25 119.8 142 46.5
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 2.7e-25 119.4 79 70.9
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 3.6e-25 119.0 141 49.6
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 6.1e-25 118.2 70 74.3
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 7.9e-25 117.9 134 47.0
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 2.3e-24 116.3 104 58.7
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 2.3e-24 116.3 145 44.1
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 3.9e-24 115.5 59 81.4
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 3.9e-24 115.5 145 43.4
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 8.7e-24 114.4 91 54.9
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 1.9e-23 113.2 139 54.0
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 3.3e-23 112.5 80 63.8
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 4.3e-23 112.1 75 68.0
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 4.3e-23 112.1 106 53.8
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 4.3e-23 112.1 80 67.5
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 4.3e-23 112.1 156 43.6
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 5.7e-23 111.7 62 77.4
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 7.4e-23 111.3 62 77.4
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 7.4e-23 111.3 62 77.4
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 7.4e-23 111.3 62 77.4
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 7.4e-23 111.3 79 65.8
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 9.7e-23 110.9 93 57.0
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.3e-22 110.5 59 78.0
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 2.8e-22 109.4 62 74.2
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 2.8e-22 109.4 69 71.0
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 3.7e-22 109.0 59 76.3
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 4.8e-22 108.6 104 53.8
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 8.2e-22 107.8 131 49.6
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 1.1e-21 107.5 110 52.7
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 1.4e-21 107.1 102 53.9
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 3.1e-21 105.9 77 61.0
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 6.9e-21 104.8 149 42.3
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 3.8e-19 99.0 151 37.7
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 6.5e-19 98.2 80 53.8
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 7.9e-17 91.3 161 41.0
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 3.0e-16 89.4 118 46.6
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 1.3e-14 84.0 147 48.3
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 2.4e-13 79.7 54 64.8
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.9e-11 72.8 58 63.8
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 5.0e-11 72.0 43 74.4


User provided reference genes

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