Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2176 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.1e-116 421.8 238 100.0
FvH4_5g33851 Fragaria vesca HOM05D000539 ORTHO05D000233 1.5e-70 270.4 306 57.5
FvH4_6g17051 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-51 207.6 231 55.8
FAN28G0890 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.8e-32 143.3 127 67.7
FAN23G1524 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.6e-32 142.9 140 62.1
FAN05G5337 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.8e-32 142.5 128 66.4
FAN09G4698 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.2e-32 142.1 127 66.9
FAN07G0889 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.1e-31 139.8 128 66.4
FAN05G1979 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.9e-30 134.8 274 45.6
RcHm_v2.0_Chr3g0462471 Rosa chinensis HOM05D000539 ORTHO05D000233 5.8e-22 109.0 142 43.7
RcHm_v2.0_Chr5g0082411 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-21 107.5 142 43.7
FvH4_3g18051 Fragaria vesca HOM05D000539 ORTHO05D000592 1.3e-18 97.8 235 30.2
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.3e-18 97.1 80 72.5
FAN28G2905 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.1e-17 94.7 81 70.4
FvH4_5g31943 Fragaria vesca HOM05D000539 ORTHO05D000233 7.4e-17 92.0 199 32.7
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-16 91.3 307 26.1
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 6.2e-16 89.0 307 26.1
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-15 88.2 235 31.1
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-15 87.8 298 25.5
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-15 87.4 294 26.5
FvH4_7g16902 Fragaria vesca HOM05D000107 ORTHO05D035324 3.1e-15 86.7 173 31.8
FAN26G0195 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.9e-15 85.5 222 27.9
FAN26G3042 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.5e-14 82.8 272 26.8
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 7.6e-14 82.0 296 25.0
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 7.6e-14 82.0 307 26.1
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-13 81.3 296 24.7
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-13 80.9 307 25.7
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 8.4e-13 78.6 306 24.8
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 4.2e-12 76.3 91 39.6
RcHm_v2.0_Chr5g0071741 Rosa chinensis HOM05D000539 ORTHO05D000233 7.1e-12 75.5 118 38.1
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-11 74.7 238 26.1
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 2.1e-11 73.9 91 39.6
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 2.1e-11 73.9 107 35.5
FvH4_3g14251 Fragaria vesca HOM05D000539 ORTHO05D000233 2.1e-11 73.9 107 35.5
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 2.7e-11 73.6 306 23.2
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 6.1e-11 72.4 88 40.9
RcHm_v2.0_Chr1g0340601 Rosa chinensis HOM05D000539 ORTHO05D000233 7.9e-11 72.0 92 38.0
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 7.9e-11 72.0 83 42.2
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-10 71.2 307 23.5
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-10 70.9 92 37.0
FAN18G3492 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-10 70.9 92 38.0
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-10 70.9 92 37.0
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-10 70.9 92 37.0
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-10 70.9 92 37.0
RcHm_v2.0_Chr5g0066151 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-10 70.5 238 26.5
FvH4_6g53023 Fragaria vesca HOM05D000539 ORTHO05D000233 5.1e-10 69.3 82 40.2
FAN13G3216 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.1e-10 69.3 83 39.8
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 6.7e-10 68.9 163 27.0
FvH4_3g31713 Fragaria vesca HOM05D000539 ORTHO05D000233 8.7e-10 68.6 88 38.6
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.7e-10 68.6 92 35.9
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-09 68.2 166 26.5
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-09 68.2 92 37.0
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-09 68.2 92 35.9
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-09 68.2 92 35.9
FvH4_3g26442 Fragaria vesca HOM05D000539 ORTHO05D000233 1.5e-09 67.8 272 25.7
FvH4_2g07752 Fragaria vesca HOM05D000539 ORTHO05D000233 2.5e-09 67.0 110 34.5
FvH4_5g20921 Fragaria vesca HOM05D000539 ORTHO05D000233 5.7e-09 65.9 227 27.8
FAN15G1280 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.4e-09 65.5 92 35.9
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 1.3e-08 64.7 112 35.7
FvH4_1g26740 Fragaria vesca HOM05D000539 ORTHO05D000592 1.6e-08 64.3 175 26.3
RcHm_v2.0_Chr2g0095191 Rosa chinensis HOM05D000107 ORTHO05D000062 1.6e-08 64.3 92 37.0
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 2.2e-08 63.9 109 38.5
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 2.8e-08 63.5 330 21.5
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 3.7e-08 63.2 84 41.7
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 3.7e-08 63.2 110 35.5
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 3.7e-08 63.2 110 35.5
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.8e-08 62.8 284 23.6
FvH4_3g30982 Fragaria vesca HOM05D000539 ORTHO05D000233 8.2e-08 62.0 116 33.6
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 8.2e-08 62.0 68 42.6
Rhsim05G0145200 Rhododendron simsii HOM05D000616 ORTHO05D000233 8.2e-08 62.0 135 30.4
RcHm_v2.0_Chr3g0481681 Rosa chinensis HOM05D000539 ORTHO05D000233 8.2e-08 62.0 79 40.5
FAN03G0903 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-07 61.6 92 33.7
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-07 61.6 110 36.4
RcHm_v2.0_Chr5g0045841 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-07 61.6 73 42.5
ECA236G3736 Erigeron canadensis HOM05D000539 ORTHO05D000233 1.4e-07 61.2 177 26.6
FAN02G2878 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-07 61.2 93 38.7
FAN18G1469 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-07 61.2 240 27.5
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.4e-07 61.2 195 27.7
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 2.4e-07 60.5 120 34.2
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 3.1e-07 60.1 82 41.5
RcHm_v2.0_Chr4g0395761 Rosa chinensis HOM05D000539 ORTHO05D000233 3.1e-07 60.1 67 41.8
FvH4_4g08651 Fragaria vesca HOM05D000539 ORTHO05D000233 4.1e-07 59.7 85 38.8
RcHm_v2.0_Chr6g0267111 Rosa chinensis HOM05D000539 ORTHO05D000233 4.1e-07 59.7 86 39.5
MELO3C035597.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.3e-07 59.3 155 24.5
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.3e-07 59.3 311 22.8
FAN09G4072 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.3e-07 59.3 107 34.6
FvH4_4g15803 Fragaria vesca HOM05D000539 ORTHO05D000233 6.9e-07 58.9 78 37.2
Lj4g0022111 Lotus japonicus HOM05D019175 ORTHO05D018974 6.9e-07 58.9 87 35.6
FvH4_4g16176 Fragaria vesca HOM05D000539 ORTHO05D000233 9.0e-07 58.5 243 24.3
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 9.0e-07 58.5 276 22.8
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-06 58.2 116 32.8
FvH4_7g09681 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-06 58.2 93 37.6
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-06 58.2 309 23.3
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-06 58.2 112 33.9
FvH4_4g05701 Fragaria vesca HOM05D000539 ORTHO05D000233 2.0e-06 57.4 122 33.6
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-06 57.4 78 35.9
FvH4_6g12902 Fragaria vesca HOM05D000539 ORTHO05D000233 2.6e-06 57.0 94 30.9
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 2.6e-06 57.0 118 33.9
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 2.6e-06 57.0 309 23.3
FvH4_4g04601 Fragaria vesca HOM05D000539 ORTHO05D000233 3.4e-06 56.6 157 27.4
RcHm_v2.0_Chr4g0414231 Rosa chinensis HOM05D000539 ORTHO05D000233 4.5e-06 56.2 86 34.9
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 5.9e-06 55.8 85 40.0
FvH4_7g02993 Fragaria vesca HOM05D000539 ORTHO05D000233 5.9e-06 55.8 123 31.7
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 5.9e-06 55.8 85 40.0
FAN08G2827 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.7e-06 55.5 58 44.8
FAN09G1168 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.7e-06 55.5 58 44.8
FAN10G1899 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.7e-06 55.5 58 44.8


User provided reference genes

Program Settings