Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2149 Fragaria x ananassa HOM05D006063 ORTHO05D000023 5.6e-123 444.5 262 100.0
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 1.7e-90 336.7 304 68.1
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.3e-79 300.4 305 60.0
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 1.7e-79 300.1 305 60.3
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.8e-79 298.9 305 61.3
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 5.5e-78 295.0 305 59.3
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.1e-77 291.6 305 58.7
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 2.7e-40 169.9 262 45.8
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 7.3e-38 161.8 307 41.0
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 1.7e-31 140.6 309 37.9
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 1.2e-16 91.3 213 33.8
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 3.5e-16 89.7 223 37.7
FAN04G1450 Fragaria x ananassa HOM05D006063 ORTHO05D000023 7.8e-16 88.6 51 84.3
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 3.9e-15 86.3 144 41.0
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 1.5e-14 84.3 272 30.9
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 4.8e-13 79.3 211 34.6
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 6.2e-13 79.0 219 34.2
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 6.2e-13 79.0 95 51.6
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 1.8e-12 77.4 212 34.4
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 1.5e-11 74.3 225 35.6
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 1.5e-11 74.3 311 28.6
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.4e-11 72.8 224 32.1
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.4e-11 72.8 224 32.1
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.2e-10 70.5 166 34.9
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 2.2e-10 70.5 277 30.7
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 3.8e-10 69.7 220 31.4
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 3.8e-10 69.7 274 29.6
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 6.4e-10 68.9 243 31.7
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 1.4e-09 67.8 277 30.3
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 2.4e-09 67.0 278 29.9
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 1.2e-08 64.7 222 32.0
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 1.6e-08 64.3 105 43.8
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 2.7e-08 63.5 146 34.9
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 3.5e-08 63.2 223 32.3
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 4.6e-08 62.8 146 34.9
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 6.0e-08 62.4 310 28.4
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.0e-07 61.6 218 29.8
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 1.3e-07 61.2 95 43.2
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 1.7e-07 60.8 157 33.1
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 1.7e-07 60.8 191 30.9
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 2.3e-07 60.5 141 32.6
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 2.3e-07 60.5 133 34.6
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 3.0e-07 60.1 218 29.8
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 3.9e-07 59.7 305 30.2
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 5.1e-07 59.3 175 29.7
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 8.7e-07 58.5 206 31.1
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 1.1e-06 58.2 216 29.2
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 1.1e-06 58.2 305 29.8
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 1.5e-06 57.8 168 31.5
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 2.5e-06 57.0 182 30.2
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 3.3e-06 56.6 222 28.4
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 5.6e-06 55.8 229 27.9
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 7.3e-06 55.5 302 27.5
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 9.6e-06 55.1 131 34.4


User provided reference genes

Program Settings