Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 4.5e-93 344.7 196 100.0
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 4.0e-41 172.2 88 96.6
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 4.0e-41 172.2 88 96.6
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 4.0e-41 172.2 88 96.6
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 5.8e-40 168.3 88 94.3
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 4.6e-37 158.7 88 87.5
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 7.9e-37 157.9 88 86.4
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 1.8e-36 156.8 88 85.2
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 2.3e-36 156.4 88 86.4
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 3.0e-36 156.0 88 86.4
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 3.0e-36 156.0 88 84.1
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 3.9e-36 155.6 88 84.1
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 3.9e-36 155.6 88 81.8
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 1.5e-35 153.7 87 85.1
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 1.9e-35 153.3 88 81.8
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 2.5e-35 152.9 88 80.7
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 2.5e-35 152.9 88 81.8
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 5.6e-35 151.8 88 85.2
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 7.4e-35 151.4 88 79.5
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 9.6e-35 151.0 88 80.7
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 9.6e-35 151.0 88 79.5
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 9.6e-35 151.0 88 80.7
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 9.6e-35 151.0 88 80.7
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 1.3e-34 150.6 88 79.5
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 1.3e-34 150.6 88 81.8
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 1.3e-34 150.6 88 81.8
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 1.6e-34 150.2 88 79.5
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 1.6e-34 150.2 88 80.7
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 2.8e-34 149.4 111 68.5
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 2.8e-34 149.4 88 78.4
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 2.8e-34 149.4 88 79.5
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 2.8e-34 149.4 88 78.4
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 3.7e-34 149.1 88 80.7
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 3.7e-34 149.1 88 80.7
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 4.8e-34 148.7 88 79.5
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 4.8e-34 148.7 88 79.5
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 4.8e-34 148.7 88 79.5
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 6.2e-34 148.3 89 77.5
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 6.2e-34 148.3 87 81.6
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 6.2e-34 148.3 87 80.5
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 6.2e-34 148.3 88 80.7
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 6.2e-34 148.3 85 82.4
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 8.1e-34 147.9 88 76.1
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 8.1e-34 147.9 88 81.8
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 8.1e-34 147.9 87 80.5
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 8.1e-34 147.9 88 80.7
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.1e-33 147.5 87 79.3
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 1.1e-33 147.5 88 79.5
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.4e-33 147.1 88 78.4
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 1.4e-33 147.1 88 76.1
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 2.4e-33 146.4 88 78.4
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 2.4e-33 146.4 88 79.5
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 2.4e-33 146.4 88 79.5
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 3.1e-33 146.0 88 79.5
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 3.1e-33 146.0 87 79.3
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 4.0e-33 145.6 88 77.3
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 4.0e-33 145.6 88 80.7
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 5.3e-33 145.2 88 79.5
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 5.3e-33 145.2 111 70.3
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 5.3e-33 145.2 88 77.3
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 6.9e-33 144.8 88 78.4
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 9.0e-33 144.4 88 77.3
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 9.0e-33 144.4 88 78.4
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 9.0e-33 144.4 88 77.3
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 9.0e-33 144.4 88 76.1
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 1.2e-32 144.1 88 76.1
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 1.2e-32 144.1 87 79.3
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 1.2e-32 144.1 88 77.3
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 1.5e-32 143.7 88 77.3
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 2.0e-32 143.3 88 81.8
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 2.0e-32 143.3 88 75.0
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 2.0e-32 143.3 87 78.2
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 2.0e-32 143.3 88 79.5
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 2.0e-32 143.3 87 78.2
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 2.6e-32 142.9 88 76.1
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 2.6e-32 142.9 87 77.0
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 3.4e-32 142.5 88 76.1
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 3.4e-32 142.5 88 76.1
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 4.5e-32 142.1 106 67.9
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 4.5e-32 142.1 87 78.2
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 5.8e-32 141.7 88 79.5
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 5.8e-32 141.7 88 77.3
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 5.8e-32 141.7 88 77.3
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 7.6e-32 141.4 88 80.7
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 7.6e-32 141.4 87 78.2
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 7.6e-32 141.4 88 76.1
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 7.6e-32 141.4 88 76.1
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 7.6e-32 141.4 88 76.1
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 9.9e-32 141.0 88 80.7
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 9.9e-32 141.0 87 78.2
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 9.9e-32 141.0 87 77.0
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 1.3e-31 140.6 88 80.7
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 1.7e-31 140.2 87 78.2
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.2e-31 139.8 88 75.0
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.2e-31 139.8 88 75.0
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 2.9e-31 139.4 86 77.9
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 2.9e-31 139.4 86 77.9
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 4.9e-31 138.7 87 75.9
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 4.9e-31 138.7 87 74.7
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 1.1e-30 137.5 88 71.6
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 1.1e-30 137.5 87 77.0
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 1.4e-30 137.1 87 73.6
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 1.9e-30 136.7 123 60.2
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 1.9e-30 136.7 112 62.5
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 2.5e-30 136.3 87 73.6
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 3.2e-30 136.0 87 72.4
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 5.5e-30 135.2 86 79.1
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 7.1e-30 134.8 88 72.7
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 9.3e-30 134.4 87 74.7
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.2e-29 134.0 100 67.0
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 2.1e-29 133.3 87 74.7
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 2.7e-29 132.9 87 72.4
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 2.7e-29 132.9 88 73.9
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 3.5e-29 132.5 87 73.6
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 3.5e-29 132.5 87 73.6
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 3.5e-29 132.5 87 73.6
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 3.5e-29 132.5 100 65.0
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 1.0e-28 131.0 89 66.3
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 1.8e-28 130.2 87 71.3
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 3.9e-28 129.0 88 70.5
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 6.7e-28 128.3 88 65.9
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 3.3e-27 125.9 79 78.5
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 7.4e-27 124.8 85 70.6
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 6.9e-25 118.2 111 55.9
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 2.0e-24 116.7 73 76.7
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 2.0e-24 116.7 73 76.7
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 2.6e-24 116.3 115 54.8
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 5.8e-24 115.2 67 80.6
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 2.9e-23 112.8 70 77.1
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 2.5e-22 109.8 69 79.7
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 2.5e-22 109.8 86 64.0
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 4.2e-22 109.0 74 68.9
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 4.2e-22 109.0 116 52.6
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 4.6e-21 105.5 58 81.0
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 7.9e-21 104.8 87 62.1
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 2.2e-18 96.7 85 58.8
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 1.2e-16 90.9 87 56.3
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.3e-15 87.4 45 91.1
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 3.6e-13 79.3 91 44.0
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 2.5e-11 73.2 84 48.8
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 8.2e-10 68.2 86 37.2
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 9.1e-09 64.7 33 90.9
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 1.7e-07 60.5 40 72.5
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 6.5e-07 58.5 85 36.5
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 5.5e-06 55.5 87 37.9


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