Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 5.9e-280 967.2 618 100.0
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.3e-267 924.9 622 90.8
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 7.0e-265 917.1 619 86.1
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 8.0e-261 903.7 618 89.6
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.3e-255 885.6 626 77.8
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 9.6e-198 694.1 615 77.9
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 9.4e-177 624.4 616 67.2
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 7.0e-156 555.1 608 64.1
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 2.4e-148 530.0 618 59.7
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 2.3e-143 513.5 615 55.3
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.3e-138 497.7 632 51.3
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 2.8e-136 490.0 612 50.8
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 1.4e-135 487.6 617 55.6
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 4.0e-135 486.1 627 47.0
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 8.9e-135 485.0 607 59.5
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 5.7e-134 482.3 615 54.5
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.3e-133 481.1 607 54.5
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.0e-131 473.8 601 54.4
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.0e-130 471.5 615 52.7
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 2.8e-128 463.4 633 45.7
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.3e-127 460.3 329 82.7
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 1.5e-126 457.6 561 60.4
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 4.1e-124 449.5 599 52.9
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 7.0e-124 448.7 604 55.8
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 9.2e-124 448.4 606 52.5
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.7e-123 446.8 611 51.2
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 5.0e-122 442.6 613 52.0
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.5e-121 441.0 628 48.1
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 1.5e-118 431.0 602 52.8
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.4e-118 429.5 609 47.9
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 2.9e-117 426.8 601 52.9
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.1e-116 422.9 649 49.6
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 1.0e-114 418.3 600 48.0
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 3.9e-114 416.4 609 48.9
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 7.3e-113 412.1 598 49.2
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 2.6e-110 403.7 643 44.8
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 3.4e-110 403.3 609 48.4
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 4.4e-110 402.9 606 46.4
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 9.9e-110 401.7 539 57.9
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 6.4e-109 399.1 606 48.2
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 7.1e-108 395.6 604 48.7
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 6.0e-107 392.5 613 48.9
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 1.0e-106 391.7 617 52.2
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 2.3e-106 390.6 604 51.2
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 3.0e-106 390.2 604 48.7
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 3.0e-106 390.2 607 50.1
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 3.9e-106 389.8 607 50.4
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.2e-104 384.8 617 52.2
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 2.8e-104 383.6 601 49.6
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 6.2e-104 382.5 566 49.5
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 1.4e-103 381.3 608 50.0
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 5.2e-103 379.4 644 46.6
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.2e-102 378.3 609 43.7
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.3e-101 374.8 615 54.5
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 3.8e-101 373.2 623 49.9
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.1e-100 371.7 608 49.5
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 4.2e-100 369.8 609 45.8
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 3.9e-98 363.2 613 49.1
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 3.9e-98 363.2 605 48.6
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 8.7e-98 362.1 589 46.9
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 8.7e-98 362.1 398 54.3
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 4.3e-97 359.8 545 46.1
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 5.6e-97 359.4 607 45.6
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 5.6e-97 359.4 573 49.6
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 1.2e-96 358.2 603 45.4
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 1.2e-96 358.2 632 44.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 4.4e-94 349.7 636 43.1
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.7e-93 347.8 608 46.1
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.7e-93 347.8 608 46.1
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 2.2e-93 347.4 614 47.1
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 2.9e-93 347.1 610 47.4
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 1.4e-92 344.7 588 48.1
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.9e-92 344.4 607 43.3
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 2.1e-91 340.9 608 45.7
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 6.0e-91 339.3 614 43.6
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 6.0e-91 339.3 614 43.6
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 7.8e-91 339.0 618 47.6
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.5e-89 334.0 358 60.3
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 3.3e-89 333.6 610 46.7
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 4.0e-87 326.6 610 41.1
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 4.5e-86 323.2 528 47.9
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 2.7e-83 313.9 614 39.9
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.7e-83 313.9 386 54.9
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.5e-83 313.5 548 44.9
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.8e-80 303.1 618 39.8
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.8e-80 303.1 618 39.8
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.5e-78 298.1 603 44.9
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 3.3e-73 280.4 520 47.3
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.6e-72 278.1 619 42.5
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 3.7e-72 276.9 609 43.2
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 1.2e-70 271.9 369 58.5
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 4.5e-70 270.0 608 43.1
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 5.8e-70 269.6 616 42.0
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.2e-69 267.7 569 45.9
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 1.4e-68 265.0 608 42.8
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 2.5e-68 264.2 639 28.0
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 4.2e-68 263.5 620 40.5
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 7.9e-67 259.2 609 41.5
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 5.7e-65 253.1 608 41.8
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 6.3e-64 249.6 615 38.5
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.8e-63 248.1 391 42.5
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.5e-57 228.4 553 40.1
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 8.2e-56 222.6 609 41.2
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.5e-54 218.4 538 34.4
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 1.6e-30 138.7 241 42.3
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 8.5e-29 132.9 153 49.0
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 2.8e-24 117.9 240 35.8
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.2e-22 112.5 157 41.4
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.9e-22 110.2 189 46.6
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 3.6e-11 74.3 587 31.7
Medtr0050s0150 Medicago truncatula HOM05D006572 ORTHO05D008181 4.7e-11 73.9 107 44.9
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.5e-09 68.9 48 68.8
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 4.4e-09 67.4 48 66.7
Cpa.g.sc79.39 Carica papaya HOM05D006572 ORTHO05D008181 8.3e-08 63.2 70 51.4
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 3.5e-06 57.8 143 31.5


User provided reference genes

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