Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1949 Fragaria x ananassa HOM05D000397 ORTHO05D013598 2.8e-73 278.5 136 100.0
FAN21G1716 Fragaria x ananassa HOM05D000397 ORTHO05D002023 3.3e-42 175.3 96 88.5
FAN25G0062 Fragaria x ananassa HOM05D000397 ORTHO05D002023 5.6e-42 174.5 96 88.5
FvH4_3g09240 Fragaria vesca HOM05D000397 ORTHO05D002023 1.6e-41 172.9 96 86.5
FvH4_2g30370 Fragaria vesca HOM05D000397 ORTHO05D013598 6.2e-41 171.0 128 70.3
FAN11G3124 Fragaria x ananassa HOM05D000397 ORTHO05D002023 1.4e-40 169.9 96 85.4
FvH4_1g10360 Fragaria vesca HOM05D000397 ORTHO05D013598 2.4e-40 169.1 96 84.4
FAN19G0050 Fragaria x ananassa HOM05D000397 ORTHO05D013598 2.4e-40 169.1 96 85.4
FAN05G0769 Fragaria x ananassa HOM05D000397 ORTHO05D013598 2.6e-39 165.6 96 84.4
FAN10G0228 Fragaria x ananassa HOM05D000397 ORTHO05D013598 4.2e-37 158.3 96 82.3
FAN05G3089 Fragaria x ananassa HOM05D000397 ORTHO05D013598 6.9e-32 141.0 117 66.7
RcHm_v2.0_Chr5g0008381 Rosa chinensis HOM05D000397 ORTHO05D002023 4.2e-29 131.7 129 55.8
FvH4_1g10760 Fragaria vesca HOM05D000397 ORTHO05D013598 2.5e-26 122.5 65 92.3
FAN14G4692 Fragaria x ananassa HOM05D008609 ORTHO05D010987 3.3e-26 122.1 65 90.8
FAN13G0728 Fragaria x ananassa HOM05D000247 ORTHO05D013598 7.4e-26 120.9 95 68.4
FAN08G0243 Fragaria x ananassa HOM05D000397 ORTHO05D013598 8.2e-25 117.5 65 87.7
FAN14G5342 Fragaria x ananassa HOM05D000397 ORTHO05D013598 3.4e-23 112.1 61 88.5
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 9.4e-21 104.0 54 94.4
FvH4_6g42890 Fragaria vesca HOM05D000397 ORTHO05D013598 1.2e-20 103.6 54 92.6
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 3.6e-20 102.1 54 92.6
FvH4_6g20070 Fragaria vesca HOM05D000397 ORTHO05D013598 2.3e-19 99.4 54 90.7
FAN17G0906 Fragaria x ananassa HOM05D000397 ORTHO05D013598 1.9e-18 96.3 53 86.8
Prupe.4G047300 Prunus persica HOM05D000397 ORTHO05D002023 6.9e-16 87.8 88 55.7
CiPaw.09G060200 Carya illinoinensis HOM05D000397 ORTHO05D002023 5.0e-14 81.6 100 46.0
Haze_06458 Corylus avellana HOM05D000397 ORTHO05D002023 6.5e-14 81.3 116 43.1
TAR624G1261 Trochodendron aralioides HOM05D000397 ORTHO05D002023 6.5e-14 81.3 91 47.3
Cfa000459 Carpinus fangiana HOM05D000397 ORTHO05D002023 1.4e-13 80.1 93 45.2
QL05p040325 Quercus lobata HOM05D000397 ORTHO05D002023 2.1e-12 76.3 114 44.7
MD10G1294900 Malus domestica HOM05D000397 ORTHO05D002023 2.3e-11 72.8 86 48.8
Nn1g06534 Nelumbo nucifera HOM05D000397 ORTHO05D002023 2.3e-11 72.8 98 42.9
TWI38G0318 Tripterygium wilfordii HOM05D000397 ORTHO05D002023 2.3e-11 72.8 123 43.1
Atru.chr10.1878 Acer truncatum HOM05D000397 ORTHO05D002023 6.7e-11 71.2 119 38.7
TWI63G1212 Tripterygium wilfordii HOM05D000397 ORTHO05D002023 8.8e-11 70.9 123 42.3
FAN16G0766 Fragaria x ananassa HOM05D000397 ORTHO05D000492 1.1e-10 70.5 39 82.1
Ciclev10014282m.g Citrus clementina HOM05D000397 ORTHO05D002023 1.5e-10 70.1 93 43.0
PSO541G5412 Papaver somniferum HOM05D000397 ORTHO05D002023 2.6e-10 69.3 124 37.9
PSO675G7294 Papaver somniferum HOM05D000397 ORTHO05D002023 3.3e-10 68.9 113 38.9
FAN10G1109 Fragaria x ananassa HOM05D000397 ORTHO05D206258 5.7e-10 68.2 51 72.5
Medtr2g079300 Medicago truncatula HOM05D000397 ORTHO05D002023 1.7e-09 66.6 89 38.2
Aqoxy1G02427 Aquilegia oxysepala HOM05D000397 ORTHO05D002023 2.2e-09 66.2 87 43.7
MBI07_g30172_MAGBIO Magnolia biondii HOM05D000397 ORTHO05D002023 2.2e-09 66.2 91 42.9
Duzib235G1412 Durio zibethinus HOM05D000397 ORTHO05D002023 3.7e-09 65.5 107 37.4
MSTRG.15886 Avicennia marina HOM05D000397 ORTHO05D002023 6.3e-09 64.7 127 33.1
TPR.G38996 Trifolium pratense HOM05D000397 ORTHO05D002023 6.3e-09 64.7 90 41.1
Dinv04308 Davidia involucrata HOM05D000397 ORTHO05D002023 1.1e-08 63.9 83 42.2
TAR624G1401 Trochodendron aralioides HOM05D000397 ORTHO05D002023 2.4e-08 62.8 82 43.9
QL04p075801 Quercus lobata HOM05D000397 ORTHO05D002023 3.1e-08 62.4 80 45.0
Eucgr.E03304 Eucalyptus grandis HOM05D000397 ORTHO05D002023 4.1e-08 62.0 91 41.8
Hma1.2p1_0785F.1_g217460 Hydrangea macrophylla HOM05D000397 ORTHO05D002023 4.1e-08 62.0 94 38.3
CSS0002760 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 5.3e-08 61.6 79 44.3
Cpa.g.sc27.22 Carica papaya HOM05D000397 ORTHO05D002023 5.3e-08 61.6 109 35.8
Psat5g244640 Pisum sativum HOM05D000397 ORTHO05D002023 5.3e-08 61.6 89 36.0
Actinidia05637 Actinidia chinensis HOM05D000397 ORTHO05D002023 1.2e-07 60.5 99 38.4
Lalb_Chr25g0286401 Lupinus albus HOM05D000397 ORTHO05D002023 1.2e-07 60.5 83 42.2
QL04p075364 Quercus lobata HOM05D000397 ORTHO05D007506 1.5e-07 60.1 77 42.9
CSS0024633 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 2.0e-07 59.7 79 44.3
CSS0038494 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 2.0e-07 59.7 79 43.0
CSS0048812 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 2.0e-07 59.7 79 44.3
FAN11G2361 Fragaria x ananassa HOM05D000397 ORTHO05D002023 2.0e-07 59.7 85 45.9
Thecc.06G187800 Theobroma cacao HOM05D000397 ORTHO05D002023 2.0e-07 59.7 107 35.5
AUR62014822 Chenopodium quinoa HOM05D000397 ORTHO05D002023 2.6e-07 59.3 96 37.5
QL04p075050 Quercus lobata HOM05D000397 ORTHO05D002023 2.6e-07 59.3 77 45.5
Rhsim04G0020600 Rhododendron simsii HOM05D000397 ORTHO05D002023 3.4e-07 58.9 81 39.5
CANSAT35G0162 Cannabis sativa HOM05D000397 ORTHO05D002023 4.5e-07 58.5 93 38.7
CDE10G0305 Ceratophyllum demersum HOM05D000397 ORTHO05D002023 5.9e-07 58.2 83 39.8
FvH4_3g20340 Fragaria vesca HOM05D000397 ORTHO05D002023 5.9e-07 58.2 85 43.5
Gohir.D10G026500 Gossypium hirsutum HOM05D000397 ORTHO05D002023 5.9e-07 58.2 90 38.9
Gorai.011G027800 Gossypium raimondii HOM05D000397 ORTHO05D002023 5.9e-07 58.2 90 38.9
Lj1A844G35 Lonicera japonica HOM05D000397 ORTHO05D002023 5.9e-07 58.2 100 36.0
COL.COLO4_31473 Corchorus olitorius HOM05D000397 ORTHO05D002023 7.7e-07 57.8 107 35.5
MELO3C002604.2 Cucumis melo HOM05D000397 ORTHO05D002023 7.7e-07 57.8 91 35.2
Lj1C844T5 Lonicera japonica HOM05D000397 ORTHO05D002023 7.7e-07 57.8 96 35.4
ECA240G0650 Erigeron canadensis HOM05D000397 ORTHO05D002023 1.0e-06 57.4 77 40.3
CSS0009049 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 1.7e-06 56.6 79 40.5
Gohir.A01G064000 Gossypium hirsutum HOM05D000397 ORTHO05D002023 1.7e-06 56.6 81 39.5
Gohir.D01G050700 Gossypium hirsutum HOM05D000397 ORTHO05D002023 1.7e-06 56.6 81 39.5
Rhsim04G0021200 Rhododendron simsii HOM05D000397 ORTHO05D002023 1.7e-06 56.6 124 32.3
HanXRQChr03g0078561 Helianthus annuus HOM05D000397 ORTHO05D002023 2.9e-06 55.8 77 40.3
HanXRQChr09g0272671 Helianthus annuus HOM05D000397 ORTHO05D002023 2.9e-06 55.8 77 40.3
TPR.G38966 Trifolium pratense HOM05D000397 ORTHO05D002023 2.9e-06 55.8 92 37.0
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 3.8e-06 55.5 79 38.0
Eucgr.F01124 Eucalyptus grandis HOM05D000397 ORTHO05D002023 3.8e-06 55.5 86 37.2
Glyma.12G224000 Glycine max HOM05D000397 ORTHO05D002023 3.8e-06 55.5 94 39.4
Lj1C1205T6 Lonicera japonica HOM05D000397 ORTHO05D002023 3.8e-06 55.5 93 38.7
Lj3g0026221 Lotus japonicus HOM05D000397 ORTHO05D002023 3.8e-06 55.5 79 43.0
SalBow7G0134 Salvia bowleyana HOM05D000397 ORTHO05D002023 3.8e-06 55.5 95 34.7
Gorai.002G070600 Gossypium raimondii HOM05D000397 ORTHO05D002023 5.0e-06 55.1 81 38.3
HanXRQChr09g0272681 Helianthus annuus HOM05D000397 ORTHO05D002023 5.0e-06 55.1 78 37.2
HanXRQChr13g0424261 Helianthus annuus HOM05D000397 ORTHO05D002023 6.5e-06 54.7 77 39.0
Medtr2g079310 Medicago truncatula HOM05D000397 ORTHO05D002023 6.5e-06 54.7 88 36.4
Glyma.13G277500 Glycine max HOM05D000397 ORTHO05D002023 8.5e-06 54.3 111 34.2


User provided reference genes

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