Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.4e-176 622.1 319 100.0
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 9.4e-173 610.1 319 98.4
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 4.8e-161 571.2 319 93.7
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.4e-160 567.8 308 95.1
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 8.0e-156 553.9 315 91.7
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.4e-136 489.2 321 81.9
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.0e-130 469.5 306 83.3
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 4.5e-98 362.1 319 62.4
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 6.3e-84 315.1 260 65.4
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 3.6e-79 299.3 322 55.6
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 6.7e-78 295.0 324 54.9
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 1.5e-77 293.9 321 53.0
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 3.2e-72 276.2 320 51.9
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 1.6e-66 257.3 311 52.4
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 4.5e-66 255.8 326 49.7
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 4.5e-66 255.8 325 49.5
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 7.7e-66 255.0 326 49.7
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 2.5e-64 250.0 317 47.6
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 2.7e-63 246.5 323 48.3
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.4e-62 244.2 319 46.4
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 5.2e-62 242.3 341 48.4
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 2.0e-61 240.4 318 49.1
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 2.6e-61 240.0 343 45.5
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 7.5e-61 238.4 322 46.6
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.3e-60 237.7 322 46.3
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 6.3e-60 235.3 325 45.5
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 2.4e-59 233.4 322 46.0
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 4.7e-55 219.2 325 41.5
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 4.0e-54 216.1 325 44.6
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 6.8e-54 215.3 318 44.7
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 2.0e-53 213.8 323 43.3
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 3.4e-53 213.0 318 42.8
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 5.7e-53 212.2 253 52.6
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 1.7e-52 210.7 317 43.5
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 1.4e-51 207.6 325 43.7
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 3.1e-51 206.5 293 44.7
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 4.5e-50 202.6 297 45.5
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 7.7e-50 201.8 318 41.2
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 2.9e-49 199.9 316 43.4
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 6.5e-49 198.7 277 45.8
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 1.9e-48 197.2 323 43.0
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 2.5e-48 196.8 329 38.9
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 2.5e-48 196.8 329 38.9
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 4.2e-48 196.1 349 41.3
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 4.2e-48 196.1 306 43.5
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.2e-47 194.5 329 41.6
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 2.7e-47 193.4 324 39.8
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 8.0e-47 191.8 275 45.5
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 1.5e-45 187.6 324 39.8
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 2.0e-45 187.2 318 42.1
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 4.4e-45 186.0 324 42.0
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 2.2e-44 183.7 241 45.6
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 3.7e-44 183.0 326 39.9
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 7.0e-43 178.7 335 41.8
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.2e-42 177.9 306 40.2
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 1.0e-41 174.9 355 36.6
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.8e-41 172.9 321 38.6
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.3e-40 169.9 321 38.6
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 3.3e-40 169.9 324 39.5
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 1.5e-37 161.0 323 38.7
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 2.0e-37 160.6 354 38.7
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 4.4e-37 159.5 330 37.9
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 2.4e-35 153.7 330 40.9
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 5.4e-35 152.5 317 39.4
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 5.4e-35 152.5 330 39.1
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 7.0e-35 152.1 330 40.9
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 2.0e-34 150.6 311 38.3
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 2.3e-33 147.1 320 36.2
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 8.6e-33 145.2 316 36.1
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 3.3e-32 143.3 318 35.8
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 3.3e-32 143.3 312 37.8
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 9.5e-32 141.7 313 37.4
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 4.7e-31 139.4 323 36.2
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 6.2e-31 139.0 313 37.1
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 2.6e-29 133.7 240 42.9
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 3.7e-28 129.8 356 31.5
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 5.4e-27 125.9 328 33.2
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 7.0e-27 125.6 258 36.0
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 9.2e-27 125.2 314 35.4
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 3.5e-26 123.2 215 39.1
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 3.3e-24 116.7 351 31.9
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 4.3e-24 116.3 346 31.2
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 1.3e-20 104.8 305 33.4
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 1.7e-20 104.4 341 28.4
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 2.3e-17 94.0 166 39.2
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 1.2e-15 88.2 202 36.6
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 8.1e-15 85.5 334 27.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.8e-14 84.3 309 30.4
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 8.9e-14 82.0 327 29.1
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 1.2e-13 81.6 293 29.4
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 2.0e-13 80.9 335 26.3
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.4e-13 80.1 162 38.9
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 4.6e-10 69.7 89 46.1
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 2.5e-08 63.9 189 33.9


User provided reference genes

Program Settings