Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1787 Fragaria x ananassa HOM05D000213 ORTHO05D000426 1.1e-57 226.9 154 100.0
FvH4_5g39060 Fragaria vesca HOM05D000213 ORTHO05D000426 2.9e-50 202.2 107 95.3
FAN04G2542 Fragaria x ananassa HOM05D000213 ORTHO05D000426 2.9e-50 202.2 107 95.3
FAN13G2832 Fragaria x ananassa HOM05D000213 ORTHO05D000426 6.4e-50 201.1 107 94.4
FAN18G2359 Fragaria x ananassa HOM05D000213 ORTHO05D000426 3.5e-48 195.3 107 94.4
RcHm_v2.0_Chr7g0241021 Rosa chinensis HOM05D000213 ORTHO05D000426 1.1e-38 163.7 99 87.9
Prupe.8G265900 Prunus persica HOM05D000213 ORTHO05D000426 2.8e-21 105.9 104 68.3
Ciclev10021624m.g Citrus clementina HOM05D000213 ORTHO05D000426 2.4e-17 92.8 104 57.7
QL12p019556 Quercus lobata HOM05D000213 ORTHO05D000426 7.1e-17 91.3 112 58.9
Haze_05053 Corylus avellana HOM05D000213 ORTHO05D000426 9.3e-17 90.9 114 60.5
Cfa005785 Carpinus fangiana HOM05D000213 ORTHO05D000426 1.2e-16 90.5 109 60.6
CiPaw.07G118300 Carya illinoinensis HOM05D000213 ORTHO05D000426 4.6e-16 88.6 107 59.8
CiPaw.08G089100 Carya illinoinensis HOM05D000213 ORTHO05D000426 2.3e-15 86.3 104 59.6
Atru.chr5.983 Acer truncatum HOM05D000213 ORTHO05D000426 1.6e-13 80.1 102 57.8
VMungo1383G3349 Vigna mungo HOM05D000213 ORTHO05D000426 3.6e-13 79.0 109 51.4
Duzib133G1039 Durio zibethinus HOM05D000213 ORTHO05D000426 1.4e-12 77.0 112 49.1
MD03G1292900 Malus domestica HOM05D000213 ORTHO05D000426 1.4e-12 77.0 105 56.2
Potri.014G119800 Populus trichocarpa HOM05D000213 ORTHO05D000426 1.4e-12 77.0 106 50.0
COL.COLO4_23223 Corchorus olitorius HOM05D000213 ORTHO05D000426 2.4e-12 76.3 107 48.6
TPR.G4103 Trifolium pratense HOM05D000213 ORTHO05D000426 2.4e-12 76.3 105 49.5
Manes.05G004300 Manihot esculenta HOM05D000213 ORTHO05D000426 3.1e-12 75.9 108 51.9
MD00G1140800 Malus domestica HOM05D000213 ORTHO05D000426 4.0e-12 75.5 103 54.4
arahy.Tifrunner.gnm1.ann1.D3ZAML Arachis hypogaea HOM05D000213 ORTHO05D000426 9.0e-12 74.3 102 52.0
Dinv10106 Davidia involucrata HOM05D000213 ORTHO05D000426 9.0e-12 74.3 104 52.9
TWI18G0480 Tripterygium wilfordii HOM05D000213 ORTHO05D000426 9.0e-12 74.3 109 49.5
Hma1.2p1_0486F.1_g163350 Hydrangea macrophylla HOM05D000213 ORTHO05D000426 1.2e-11 73.9 91 56.0
Sabra14G0088800 Salix brachista HOM05D000213 ORTHO05D000426 1.5e-11 73.6 107 47.7
Thecc.01G314400 Theobroma cacao HOM05D000213 ORTHO05D000426 1.5e-11 73.6 106 50.0
Duzib211G0393 Durio zibethinus HOM05D000213 ORTHO05D000426 2.0e-11 73.2 123 44.7
Medtr7g109600 Medicago truncatula HOM05D000213 ORTHO05D000426 2.6e-11 72.8 105 50.5
Glyma.19G217000 Glycine max HOM05D000213 ORTHO05D000426 9.9e-11 70.9 105 49.5
Gohir.A11G109200 Gossypium hirsutum HOM05D000213 ORTHO05D000426 9.9e-11 70.9 108 47.2
Gohir.D11G113700 Gossypium hirsutum HOM05D000213 ORTHO05D000426 9.9e-11 70.9 108 47.2
Glyma.03G220100 Glycine max HOM05D000213 ORTHO05D000426 3.8e-10 68.9 105 49.5
Phvul.001G213600 Phaseolus vulgaris HOM05D000213 ORTHO05D000426 3.8e-10 68.9 104 46.2
TAR362G0071 Trochodendron aralioides HOM05D000213 ORTHO05D000426 3.8e-10 68.9 113 50.4
Gorai.007G122300 Gossypium raimondii HOM05D000213 ORTHO05D000426 4.9e-10 68.6 108 46.3
Gorai.008G138900 Gossypium raimondii HOM05D000213 ORTHO05D000426 4.9e-10 68.6 104 49.0
Hma1.2p1_0312F.1_g121410 Hydrangea macrophylla HOM05D006163 ORTHO05D000426 4.9e-10 68.6 92 52.2
Dinv33124 Davidia involucrata HOM05D000213 ORTHO05D000426 6.4e-10 68.2 103 52.4
Manes.01G228500 Manihot esculenta HOM05D000213 ORTHO05D000426 1.4e-09 67.0 109 47.7
MSTRG.21691 Avicennia marina HOM05D000213 ORTHO05D000426 3.2e-09 65.9 108 42.6
GSVIVG01028129001 Vitis vinifera HOM05D000213 ORTHO05D000426 9.3e-09 64.3 113 46.9
DCAR_018294 Daucus carota HOM05D000213 ORTHO05D000426 3.0e-07 59.3 90 47.8
Hma1.2p1_0408F.1_g146630 Hydrangea macrophylla HOM05D000213 ORTHO05D000426 3.0e-07 59.3 102 45.1
Lj1C16T16 Lonicera japonica HOM05D000213 ORTHO05D000426 3.9e-07 58.9 105 43.8
Potri.002G195300 Populus trichocarpa HOM05D000213 ORTHO05D000426 5.1e-07 58.5 79 50.6
TAR633G2526 Trochodendron aralioides HOM05D000213 ORTHO05D000426 5.1e-07 58.5 109 46.8
Gohir.A12G124200 Gossypium hirsutum HOM05D000213 ORTHO05D000426 6.7e-07 58.2 104 45.2
Lsat_1_v5_gn_9_2661 Lactuca sativa HOM05D000213 ORTHO05D000426 1.5e-06 57.0 100 44.0
Rhsim13G0004700 Rhododendron simsii HOM05D000213 ORTHO05D000426 1.5e-06 57.0 107 39.3
Sabra02G0161500 Salix brachista HOM05D000213 ORTHO05D000426 3.3e-06 55.8 75 49.3
Lalb_Chr21g0309631 Lupinus albus HOM05D000213 ORTHO05D000426 4.3e-06 55.5 104 39.4
Nn4g25588 Nelumbo nucifera HOM05D000213 ORTHO05D000426 4.3e-06 55.5 113 45.1
ECA247G3965 Erigeron canadensis HOM05D000213 ORTHO05D000426 5.6e-06 55.1 102 42.2
TWI36G1644 Tripterygium wilfordii HOM05D000213 ORTHO05D000426 7.4e-06 54.7 86 41.9


User provided reference genes

Program Settings