Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1695 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.8e-55 216.9 107 100.0
FAN13G1277 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.1e-36 153.7 79 92.4
FAN26G1926 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.1e-35 153.3 103 73.8
FvH4_5g37061 Fragaria vesca HOM05D003375 ORTHO05D004719 1.1e-32 143.3 87 81.6
RcHm_v2.0_Chr6g0265791 Rosa chinensis HOM05D003375 ORTHO05D004719 3.9e-30 134.8 104 66.3
FAN14G1343 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.5e-29 132.9 100 71.0
FAN10G1469 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.1e-28 127.1 105 65.7
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 8.1e-28 127.1 104 63.5
FAN08G2941 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.1e-27 126.7 98 65.3
FAN10G0217 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.1e-27 125.2 105 65.7
FAN15G2195 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.1e-27 125.2 107 65.4
FAN07G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.0e-27 124.8 99 63.6
FAN26G0809 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.3e-27 124.4 108 66.7
FAN25G0390 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.9e-27 124.0 102 62.7
FAN08G0312 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.9e-25 117.9 78 74.4
FAN12G1540 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.2e-24 115.2 92 65.2
FAN04G0051 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.7e-23 112.1 87 64.4
FAN14G2235 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.9e-23 110.5 72 75.0
FvH4_2g14911 Fragaria vesca HOM05D003375 ORTHO05D004719 5.1e-22 107.8 102 55.9
FvH4_3g10980 Fragaria vesca HOM05D003375 ORTHO05D004719 5.1e-22 107.8 95 57.9
FvH4_6g28051 Fragaria vesca HOM05D003375 ORTHO05D004719 4.3e-21 104.8 83 63.9
FAN13G1412 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.3e-20 103.2 98 57.1
FvH4_6g12761 Fragaria vesca HOM05D003375 ORTHO05D004719 2.1e-20 102.4 70 70.0
FAN16G3622 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.8e-20 102.1 83 60.2
FAN28G2270 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.1e-20 100.5 91 62.6
FAN13G1338 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.0e-19 98.2 61 72.1
FAN11G1788 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.9e-19 97.4 71 67.6
FAN11G0781 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.2e-18 96.7 105 53.3
FAN21G1136 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.2e-18 96.7 95 55.8
FAN03G0146 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.5e-18 94.7 104 56.7
FAN16G2211 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.2e-17 92.4 70 68.6
FAN27G1221 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.2e-17 92.4 95 51.6
FAN26G1519 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.8e-17 91.7 68 73.5
FAN18G0979 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.4e-17 90.5 47 91.5
FAN25G2230 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.4e-17 90.5 80 62.5
FvH4_5g02662 Fragaria vesca HOM05D003375 ORTHO05D004719 1.9e-16 89.4 105 52.4
FAN09G0837 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.9e-16 89.4 62 72.6
FAN16G0043 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.4e-16 89.0 106 50.0
FAN19G1229 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.5e-16 87.8 105 53.3
FAN16G0145 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.1e-16 87.4 76 60.5
FAN18G4326 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.1e-16 87.4 104 49.0
FAN25G3537 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.1e-16 87.4 59 71.2
FAN17G0913 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.6e-15 86.3 88 48.9
FAN27G3446 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.6e-15 86.3 54 72.2
FAN11G3065 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.6e-15 84.7 103 48.5
RcHm_v2.0_Chr5g0018871 Rosa chinensis HOM05D003375 ORTHO05D004719 4.6e-15 84.7 68 57.4
FAN14G0564 Fragaria x ananassa HOM05D003375 ORTHO05D035642 6.0e-15 84.3 129 41.9
FAN12G2042 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.0e-14 83.6 60 65.0
FAN23G2314 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.0e-14 82.0 70 62.9
FAN14G1757 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.9e-14 81.6 76 57.9
FAN14G5426 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.9e-14 81.6 54 79.6
FAN03G1685 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.5e-13 79.0 57 68.4
FAN19G0492 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.4e-13 77.4 75 58.7
FAN16G0830 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.3e-12 76.6 96 52.1
FAN09G2220 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.1e-12 75.9 106 46.2
FAN20G0182 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.1e-12 75.9 66 65.2
FAN12G1084 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.8e-12 75.5 94 43.6
FAN15G3620 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.8e-12 75.5 59 67.8
FAN27G1177 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.8e-12 75.5 73 50.7
FAN15G0551 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.8e-12 74.7 106 45.3
FAN20G2726 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.4e-11 73.2 48 68.8
FAN03G0285 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.0e-11 71.6 69 56.5
FAN12G3587 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.9e-11 70.9 54 61.1
FAN21G2474 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.9e-11 70.9 94 48.9
FAN15G3553 Fragaria x ananassa HOM05D003375 ORTHO05D004719 9.0e-11 70.5 46 65.2
FAN26G1146 Fragaria x ananassa HOM05D003375 ORTHO05D004719 9.0e-11 70.5 104 45.2
FAN18G3935 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.2e-10 70.1 66 57.6
FAN20G3008 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.2e-10 70.1 103 42.7
FAN04G1017 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.5e-10 69.7 41 85.4
FAN28G2157 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.5e-10 69.7 54 72.2
FAN25G2555 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.6e-10 68.9 54 68.5
FAN27G2811 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.6e-10 68.9 59 61.0
FAN28G0385 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.6e-10 68.9 51 72.5
FAN12G2393 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.4e-10 68.6 44 72.7
FAN13G2447 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.4e-10 68.6 52 65.4
FAN14G2475 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.8e-10 67.8 45 68.9
FAN26G1395 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.8e-10 67.8 44 72.7
FAN21G1505 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.6e-10 67.4 46 67.4
FAN16G3186 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.0e-09 67.0 50 70.0
FAN16G3732 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.0e-09 67.0 50 70.0
FAN08G0641 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.7e-09 66.2 71 53.5
FAN24G1228 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.7e-09 66.2 52 67.3
FAN11G1059 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.2e-09 65.9 106 42.5
FAN19G0095 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.2e-09 65.9 44 72.7
FAN21G3130 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.9e-09 64.7 41 80.5
FAN07G1057 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.1e-08 63.5 42 71.4
FAN07G0454 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.4e-08 63.2 54 63.0
FAN21G3028 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.4e-08 63.2 37 78.4
FAN14G5911 Fragaria x ananassa HOM05D007743 ORTHO05D004719 1.9e-08 62.8 44 63.6
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 3.2e-08 62.0 103 29.1
FAN08G0611 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.2e-08 62.0 39 71.8
FAN06G0386 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.2e-08 61.6 44 70.5
FAN17G2243 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.5e-08 61.2 44 63.6
FAN17G2260 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.5e-08 61.2 44 63.6
FAN15G1924 Fragaria x ananassa HOM05D003375 ORTHO05D004719 9.3e-08 60.5 44 68.2
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 1.6e-07 59.7 103 29.1
FAN25G1722 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.6e-07 59.7 43 65.1
FvH4_7g16371 Fragaria vesca HOM05D008430 ORTHO05D010682 2.1e-07 59.3 104 28.8
FAN06G0233 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.1e-07 59.3 104 28.8
FAN03G1205 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.7e-07 58.9 41 75.6
FAN25G2280 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.7e-07 58.9 52 63.5
FAN28G0509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.7e-07 58.9 82 34.1
FvH4_6g03011 Fragaria vesca HOM05D008430 ORTHO05D010682 3.5e-07 58.5 105 29.5
FAN27G2265 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.5e-07 58.5 47 63.8
FAN08G0305 Fragaria x ananassa HOM05D009201 ORTHO05D005238 6.0e-07 57.8 104 30.8
FAN15G0005 Fragaria x ananassa HOM05D008430 ORTHO05D010682 6.0e-07 57.8 105 28.6
FAN16G1132 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.0e-07 57.8 39 74.4
Lj4g0025238 Lotus japonicus HOM05D000003 ORTHO05D000126 6.0e-07 57.8 103 29.1
FAN02G1168 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.9e-07 57.4 40 70.0
FAN06G0355 Fragaria x ananassa HOM05D008430 ORTHO05D010682 7.9e-07 57.4 104 27.9
FAN15G1816 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.9e-07 57.4 94 30.9
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.9e-07 57.4 103 28.2
FAN23G3107 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.9e-07 57.4 41 73.2
FvH4_7g00911 Fragaria vesca HOM05D003375 ORTHO05D004719 1.0e-06 57.0 43 69.8
FAN25G0652 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.3e-06 56.6 85 31.8
FvH4_2g07601 Fragaria vesca HOM05D002480 ORTHO05D003145 1.8e-06 56.2 103 30.1
FAN15G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.8e-06 56.2 54 57.4
Atru.chr13.1167 Acer truncatum HOM05D000003 ORTHO05D000126 2.3e-06 55.8 105 29.5
FvH4_1g20081 Fragaria vesca HOM05D002480 ORTHO05D003145 2.3e-06 55.8 97 33.0
Lj2g0023122 Lotus japonicus HOM05D000003 ORTHO05D000126 2.3e-06 55.8 104 29.8
Lj4g0024219 Lotus japonicus HOM05D000003 ORTHO05D000126 2.3e-06 55.8 95 30.5
QL04p013046 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-06 55.8 91 35.2
FAN17G0650 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.9e-06 55.1 78 33.3
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 5.1e-06 54.7 104 29.8
FAN16G3475 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-06 54.7 77 32.5
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-06 54.7 96 31.2
FAN25G3560 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.1e-06 54.7 106 35.8
Lj4g0001415 Lotus japonicus HOM05D000003 ORTHO05D000126 5.1e-06 54.7 103 32.0
Prupe.3G196300 Prunus persica HOM05D000003 ORTHO05D000126 5.1e-06 54.7 99 30.3
FvH4_4g00290 Fragaria vesca HOM05D000564 ORTHO05D020690 6.7e-06 54.3 101 29.7
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.7e-06 54.3 96 31.2
Atru.chr3.1685 Acer truncatum HOM05D000003 ORTHO05D000126 8.7e-06 53.9 106 31.1
FAN11G2510 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.7e-06 53.9 39 71.8
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.7e-06 53.9 96 31.2
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.7e-06 53.9 89 31.5
RcHm_v2.0_Chr1g0350781 Rosa chinensis HOM05D008430 ORTHO05D010682 8.7e-06 53.9 69 36.2


User provided reference genes

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