Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.2e-174 616.3 300 100.0
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 5.1e-144 514.6 314 83.4
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 4.7e-142 508.1 319 80.9
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.4e-141 506.5 300 84.3
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.3e-136 489.2 326 79.1
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 3.4e-124 448.7 313 73.8
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 2.4e-122 442.6 313 72.8
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 5.5e-122 441.4 314 70.1
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 9.3e-122 440.7 312 71.2
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 7.9e-121 437.6 313 69.3
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.0e-120 437.2 304 72.0
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 1.8e-120 436.4 316 69.6
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 3.9e-120 435.3 312 71.2
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 3.9e-120 435.3 318 68.9
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 5.1e-120 434.9 312 67.6
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 1.1e-119 433.7 311 68.8
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 1.5e-119 433.3 321 67.9
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 1.9e-119 433.0 311 68.2
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 9.6e-119 430.6 313 69.6
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.3e-118 430.3 307 69.4
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 2.8e-118 429.1 309 67.0
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 2.8e-118 429.1 312 68.6
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 4.8e-118 428.3 319 67.1
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 8.1e-118 427.6 318 68.9
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 8.1e-118 427.6 311 69.8
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 8.1e-118 427.6 319 67.1
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 1.1e-117 427.2 304 69.1
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 1.1e-117 427.2 314 67.8
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 1.1e-117 427.2 312 67.3
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 1.8e-117 426.4 318 69.2
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 2.4e-117 426.0 315 68.9
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 2.4e-117 426.0 310 69.4
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 2.4e-117 426.0 311 69.1
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 2.4e-117 426.0 316 67.1
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 3.1e-117 425.6 315 69.5
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 3.1e-117 425.6 315 69.5
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 6.9e-117 424.5 308 67.5
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 1.2e-116 423.7 312 67.6
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 2.0e-116 422.9 313 67.7
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.0e-116 422.9 315 68.9
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.6e-116 422.5 323 67.5
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 2.6e-116 422.5 309 69.3
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 3.4e-116 422.2 308 67.2
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.5e-116 421.8 303 67.3
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 1.0e-115 420.6 311 66.9
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.3e-115 420.2 323 66.6
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.9e-115 419.1 307 66.4
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 4.9e-115 418.3 298 70.1
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 6.5e-115 417.9 314 67.2
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 8.4e-115 417.5 308 65.9
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 1.4e-114 416.8 308 66.9
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 1.4e-114 416.8 306 65.7
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 1.9e-114 416.4 302 67.9
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 2.5e-114 416.0 311 67.8
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 5.5e-114 414.8 311 67.2
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 7.1e-114 414.5 303 67.3
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 7.1e-114 414.5 319 64.6
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.2e-113 413.7 316 65.8
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 2.7e-113 412.5 311 67.5
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 4.6e-113 411.8 303 66.7
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 4.6e-113 411.8 302 66.9
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 6.0e-113 411.4 310 66.5
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 6.0e-113 411.4 305 66.9
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 7.9e-113 411.0 313 64.9
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 3.9e-112 408.7 309 65.7
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 8.7e-112 407.5 303 66.0
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 1.5e-111 406.8 303 67.0
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 2.5e-111 406.0 303 66.3
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 2.5e-111 406.0 301 66.8
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 2.5e-111 406.0 337 62.6
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 3.3e-111 405.6 303 67.0
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 4.3e-111 405.2 316 64.9
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 5.7e-111 404.8 308 66.9
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 1.3e-110 403.7 304 66.1
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 1.3e-110 403.7 305 66.2
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 2.1e-110 402.9 301 66.1
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 2.8e-110 402.5 294 70.1
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 6.3e-110 401.4 284 69.7
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 6.3e-110 401.4 304 68.1
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 6.3e-110 401.4 303 66.0
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 1.1e-109 400.6 311 64.6
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 1.8e-109 399.8 310 64.8
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 6.9e-109 397.9 289 67.1
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 9.0e-109 397.5 316 63.6
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 1.5e-108 396.7 326 64.1
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 2.0e-108 396.4 303 64.7
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 2.0e-108 396.4 303 64.7
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.0e-107 394.0 294 67.7
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 8.4e-107 391.0 304 65.8
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 2.7e-105 386.0 299 63.5
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 4.6e-105 385.2 297 63.3
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 7.9e-105 384.4 299 63.2
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 1.3e-104 383.6 307 65.5
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 1.5e-103 380.2 300 63.3
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.9e-103 379.8 307 62.5
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 7.4e-103 377.9 332 60.5
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 7.4e-103 377.9 368 56.0
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 9.7e-103 377.5 285 64.2
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 3.7e-102 375.6 307 60.9
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 3.1e-101 372.5 315 62.9
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 1.7e-99 366.7 304 59.5
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 6.5e-99 364.8 285 62.1
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 2.1e-97 359.8 304 59.9
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 2.7e-97 359.4 309 59.5
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 1.4e-96 357.1 308 60.1
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 3.7e-94 349.0 282 62.1
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 2.2e-91 339.7 270 65.2
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 3.9e-88 328.9 269 62.1
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 8.8e-88 327.8 306 55.6
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 5.7e-87 325.1 252 65.5
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.6e-84 316.2 178 83.1
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.2e-83 313.2 199 75.9
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 3.6e-81 305.8 255 63.9
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 1.4e-80 303.9 213 70.0
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 5.9e-76 288.5 248 60.1
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 8.5e-75 284.6 169 78.7
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 8.5e-75 284.6 169 78.7
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.5e-74 283.9 304 48.0
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 2.5e-74 283.1 309 48.5
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 3.0e-72 276.2 290 50.3
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.4e-69 267.3 328 46.6
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 6.1e-65 251.9 247 55.5
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 3.0e-64 249.6 156 75.6
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 1.3e-62 244.2 154 74.0
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 4.7e-57 225.7 254 48.8
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 4.4e-55 219.2 131 77.1
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 4.4e-55 219.2 294 43.9
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.4e-45 186.8 277 41.9
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 2.7e-44 183.3 207 44.0
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 3.0e-43 179.9 217 46.1
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.8e-32 144.1 125 56.8
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 1.4e-29 134.4 124 55.6
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 6.6e-27 125.6 265 34.7
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 1.4e-24 117.9 283 32.2
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 1.5e-23 114.4 111 51.4
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 3.4e-23 113.2 227 32.6
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 1.7e-14 84.3 67 56.7
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 4.2e-13 79.7 43 79.1
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 9.9e-07 58.5 73 46.6


User provided reference genes

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