Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.2e-180 636.3 318 100.0
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.6e-151 539.7 276 99.3
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.4e-144 516.5 279 95.7
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 1.8e-144 516.2 276 96.4
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.4e-138 495.4 279 92.8
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 3.6e-116 422.2 281 78.3
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 7.9e-63 245.0 282 53.5
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 4.8e-60 235.7 208 60.6
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 2.7e-42 176.8 219 45.2
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 2.6e-37 160.2 272 37.5
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 7.5e-37 158.7 272 38.2
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 7.5e-37 158.7 353 33.4
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 2.2e-36 157.1 163 48.5
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 3.7e-36 156.4 350 33.4
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 5.4e-35 152.5 320 35.0
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 3.5e-34 149.8 327 33.3
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 6.6e-33 145.6 164 47.6
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 1.8e-30 137.5 167 41.3
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.6e-29 133.7 240 37.1
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 3.4e-29 133.3 238 38.7
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 5.7e-29 132.5 171 39.8
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 1.7e-28 131.0 183 39.9
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 4.9e-28 129.4 298 32.9
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 8.3e-28 128.6 164 40.9
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 1.8e-27 127.5 166 43.4
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 1.6e-26 124.4 237 35.9
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 2.3e-25 120.6 161 39.8
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 1.1e-24 118.2 184 34.8
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 2.8e-23 113.6 172 38.4
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 6.1e-23 112.5 218 36.2
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 1.8e-22 110.9 173 36.4
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 5.2e-22 109.4 144 38.9
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 9.8e-21 105.1 193 33.2
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 1.3e-20 104.8 293 30.7
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 4.9e-20 102.8 190 34.2
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 6.4e-20 102.4 248 35.9
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 1.1e-19 101.7 128 40.6
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 1.1e-19 101.7 227 30.0
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 1.4e-19 101.3 220 33.2
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 1.9e-19 100.9 217 34.6
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 3.2e-19 100.1 190 34.2
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 1.2e-18 98.2 190 34.2
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 2.7e-18 97.1 303 27.1
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 6.0e-18 95.9 167 34.1
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 3.0e-17 93.6 282 28.0
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 6.6e-17 92.4 128 38.3
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 3.3e-16 90.1 302 29.5
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 1.2e-15 88.2 130 38.5
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 2.8e-15 87.0 109 45.0
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 3.6e-15 86.7 179 29.1
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 1.1e-14 85.1 129 32.6
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 1.1e-14 85.1 179 29.1
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 2.0e-13 80.9 301 27.2
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 8.3e-12 75.5 88 40.9
PGR119G0138 Punica granatum HOM05D008757 ORTHO05D010583 7.0e-11 72.4 250 31.2
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 1.0e-09 68.6 179 27.9


User provided reference genes

Program Settings