Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.0e-130 468.8 283 100.0
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 1.8e-122 443.0 283 86.6
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.7e-120 435.3 283 80.6
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 8.2e-112 407.5 283 79.2
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 6.7e-106 387.9 283 72.8
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 5.0e-101 371.7 283 71.4
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 6.5e-101 371.3 279 82.4
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.1e-100 370.5 282 80.5
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 1.2e-99 367.1 277 81.6
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.3e-93 347.1 281 77.6
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 2.2e-64 250.0 283 49.1
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 1.4e-63 247.3 280 49.3
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 4.3e-60 235.7 293 57.3
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 2.0e-57 226.9 280 46.4
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 1.3e-56 224.2 385 39.0
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.2e-56 223.4 286 44.8
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.9e-56 223.0 122 90.2
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 1.1e-55 221.1 286 44.8
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 1.1e-55 221.1 282 45.7
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 4.6e-54 215.7 285 60.7
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 6.0e-54 215.3 281 44.8
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 1.3e-53 214.2 301 43.9
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 2.3e-53 213.4 282 44.7
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 3.9e-53 212.6 287 48.8
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 6.6e-53 211.8 283 46.3
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 8.7e-53 211.5 281 45.6
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 5.6e-52 208.8 285 42.5
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.2e-51 207.6 286 43.0
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 6.2e-51 205.3 290 41.4
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 1.8e-50 203.8 294 41.8
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 1.2e-49 201.1 292 42.8
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 9.9e-49 198.0 285 39.6
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 2.9e-48 196.4 285 44.6
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 3.8e-48 196.1 265 46.4
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 4.9e-48 195.7 283 42.0
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 1.1e-47 194.5 286 43.0
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 1.1e-47 194.5 266 44.7
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 1.9e-47 193.7 286 49.3
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 4.2e-47 192.6 281 41.6
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 7.1e-47 191.8 273 40.7
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 3.5e-46 189.5 287 40.8
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 6.0e-46 188.7 287 39.7
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 7.8e-46 188.3 287 40.4
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 1.0e-45 188.0 280 41.1
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 2.3e-45 186.8 263 42.2
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 5.1e-45 185.7 91 97.8
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 5.1e-45 185.7 286 42.3
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 1.1e-44 184.5 283 37.8
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 1.5e-44 184.1 289 42.2
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 1.5e-44 184.1 280 40.4
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 4.3e-44 182.6 282 45.0
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 9.6e-44 181.4 288 39.2
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 2.1e-43 180.3 308 38.3
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 2.1e-43 180.3 284 40.5
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 2.8e-43 179.9 274 40.9
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 4.8e-43 179.1 274 41.2
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 4.8e-43 179.1 278 40.6
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 6.2e-43 178.7 274 40.9
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 6.2e-43 178.7 274 40.1
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 3.1e-42 176.4 224 44.2
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 4.0e-42 176.0 281 39.9
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 9.9e-41 171.4 300 39.7
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 9.9e-41 171.4 273 40.7
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 1.3e-40 171.0 317 35.0
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 2.2e-40 170.2 280 38.9
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 2.9e-40 169.9 324 36.4
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 2.9e-40 169.9 281 37.4
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 3.8e-40 169.5 309 36.6
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 3.8e-40 169.5 282 36.9
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 3.8e-40 169.5 345 33.3
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 4.9e-40 169.1 325 37.2
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 8.4e-40 168.3 273 39.2
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 8.4e-40 168.3 323 36.5
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 1.1e-39 167.9 287 37.6
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 1.4e-39 167.5 282 36.9
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 1.4e-39 167.5 279 35.8
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 4.2e-39 166.0 214 43.5
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 9.3e-39 164.9 292 37.3
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 1.2e-38 164.5 314 38.5
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 2.1e-38 163.7 369 32.2
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 2.1e-38 163.7 301 38.2
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 2.7e-38 163.3 164 53.0
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 3.5e-38 162.9 323 33.4
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 4.6e-38 162.5 292 39.0
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 6.0e-38 162.2 273 38.8
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 7.9e-38 161.8 284 37.0
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 1.0e-37 161.4 297 35.0
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 1.0e-37 161.4 253 38.3
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.8e-37 160.6 150 56.7
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 3.0e-37 159.8 226 41.6
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 3.9e-37 159.5 271 36.2
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 8.7e-37 158.3 271 36.9
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 1.5e-36 157.5 272 34.9
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 1.5e-36 157.5 291 36.1
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.9e-36 157.1 150 55.3
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 2.5e-36 156.8 279 37.3
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 2.5e-36 156.8 279 38.0
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 2.5e-36 156.8 279 38.0
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 5.6e-36 155.6 125 54.4
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 7.4e-36 155.2 136 57.4
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 1.3e-35 154.5 272 36.0
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 1.3e-35 154.5 274 38.0
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 2.1e-35 153.7 350 31.1
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 2.8e-35 153.3 351 31.3
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 3.7e-35 152.9 285 35.8
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 6.2e-35 152.1 325 31.7
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 8.1e-35 151.8 176 46.0
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 8.1e-35 151.8 282 36.2
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.4e-34 151.0 350 31.1
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 4.0e-34 149.4 289 35.3
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 4.0e-34 149.4 289 35.3
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 4.0e-34 149.4 160 48.8
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 5.3e-34 149.1 165 47.3
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 6.9e-34 148.7 285 36.1
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 9.0e-34 148.3 180 44.4
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 2.6e-33 146.7 157 48.4
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 7.6e-33 145.2 164 47.6
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 1.7e-32 144.1 219 41.6
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 2.9e-32 143.3 177 46.9
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 8.4e-32 141.7 152 46.7
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 8.4e-32 141.7 152 46.7
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 1.4e-31 141.0 283 35.3
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 3.2e-31 139.8 173 42.2
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 7.1e-31 138.7 263 35.7
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 1.6e-30 137.5 165 46.7
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 2.7e-30 136.7 276 35.5
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 3.5e-30 136.3 140 52.1
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 3.5e-30 136.3 285 34.0
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 1.0e-29 134.8 248 37.5
FvH4_4g24221 Fragaria vesca HOM05D004296 ORTHO05D005045 1.8e-29 134.0 153 56.2
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 2.3e-29 133.7 280 33.9
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 3.9e-29 132.9 289 33.6
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 5.1e-29 132.5 286 32.5
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 5.1e-29 132.5 284 34.2
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 6.7e-29 132.1 271 34.3
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 1.5e-28 131.0 131 45.8
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 2.5e-28 130.2 151 46.4
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 3.3e-28 129.8 323 32.8
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 5.6e-28 129.0 254 33.9
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 1.1e-26 124.8 200 40.0
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 1.8e-26 124.0 265 30.6
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 2.6e-25 120.2 283 32.9
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 4.5e-25 119.4 175 37.7
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 7.6e-25 118.6 259 33.2
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 1.7e-24 117.5 120 52.5
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 4.9e-24 115.9 290 33.1
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 9.3e-23 111.7 250 40.4
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 2.1e-22 110.5 166 36.7
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 7.9e-22 108.6 257 32.3
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 4.5e-17 92.8 161 36.0
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 5.5e-15 85.9 88 48.9
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 3.0e-13 80.1 114 43.9
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 8.8e-13 78.6 126 37.3
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 2.5e-12 77.0 137 38.0
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.7e-11 74.3 61 52.5
ATR0680G137 Amborella trichopoda HOM05D004296 ORTHO05D005045 4.8e-11 72.8 57 59.6
Cfa014102 Carpinus fangiana HOM05D004296 ORTHO05D005045 1.1e-10 71.6 54 57.4
AagrBONN_evm.TU.Sc2ySwM_228.2126 Anthoceros agrestis HOM05D004296 ORTHO05D005045 1.3e-08 64.7 154 28.6
Mapoly0057s0052 Marchantia polymorpha HOM05D004296 ORTHO05D005045 2.9e-08 63.5 88 36.4
AagrBONN_evm.TU.Sc2ySwM_368.2814 Anthoceros agrestis HOM05D004296 ORTHO05D005045 6.1e-06 55.8 142 27.5


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