Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.6e-311 1069.7 700 100.0
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.8e-291 1004.6 728 86.0
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.4e-277 959.5 725 84.8
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.0e-275 953.4 725 88.3
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.1e-274 947.2 725 88.0
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 4.1e-213 745.3 736 75.1
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 3.1e-192 676.0 760 64.5
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 2.4e-173 613.2 739 63.2
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.5e-162 577.4 772 51.3
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 7.6e-159 565.1 682 52.2
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 1.6e-148 530.8 731 53.5
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 3.3e-146 523.1 780 48.2
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 3.3e-146 523.1 782 50.3
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 3.2e-141 506.5 745 49.9
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.2e-140 504.6 564 55.1
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.6e-140 504.2 733 49.7
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.6e-138 496.9 556 53.1
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 2.2e-137 493.8 782 44.9
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 3.7e-137 493.0 552 55.6
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 4.8e-137 492.7 715 52.3
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 8.2e-137 491.9 817 43.3
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 5.3e-136 489.2 735 44.1
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 5.9e-135 485.7 731 45.6
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 2.2e-134 483.8 548 53.8
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 2.9e-134 483.4 731 45.3
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 2.1e-132 477.2 744 43.3
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 3.9e-131 473.0 703 45.5
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 8.8e-131 471.9 766 44.4
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 8.8e-131 471.9 546 52.7
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 2.0e-130 470.7 789 48.7
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 2.8e-129 466.8 543 54.0
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 4.8e-129 466.1 703 49.5
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 1.4e-128 464.5 724 47.4
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 3.1e-128 463.4 801 42.9
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.6e-127 461.1 766 44.1
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 2.9e-126 456.8 798 43.1
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 3.6e-124 449.9 734 50.0
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 5.2e-123 446.0 543 51.0
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 1.2e-122 444.9 733 46.0
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.2e-122 444.9 734 45.8
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 2.6e-122 443.7 753 43.8
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 4.4e-122 443.0 778 40.0
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 2.2e-121 440.7 748 46.5
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 3.7e-121 439.9 715 46.7
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.3e-121 439.1 819 40.9
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 6.3e-121 439.1 768 47.5
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 2.4e-120 437.2 705 44.5
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 3.5e-119 433.3 730 46.4
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 4.5e-119 433.0 732 45.8
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.1e-117 428.3 811 42.3
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 5.5e-117 426.0 740 46.1
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 7.2e-117 425.6 561 46.5
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 3.6e-116 423.3 736 45.2
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 8.8e-115 418.7 805 39.4
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 7.5e-114 415.6 731 45.3
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 2.2e-113 414.1 729 41.0
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 4.1e-112 409.8 806 40.6
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.7e-110 404.4 798 39.0
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.8e-110 403.3 737 40.8
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.8e-110 403.3 737 40.8
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 5.0e-110 402.9 804 37.7
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 8.5e-110 402.1 783 39.7
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 1.5e-109 401.4 536 47.0
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 3.2e-109 400.2 804 38.2
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 3.2e-109 400.2 786 39.8
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.8e-107 394.4 732 42.8
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 3.0e-107 393.7 770 39.9
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.7e-105 387.9 494 50.0
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 1.7e-102 377.9 825 38.2
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 2.3e-102 377.5 540 48.7
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 8.3e-97 359.0 487 47.2
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.2e-95 355.1 543 45.9
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 1.2e-92 345.1 408 52.2
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.2e-89 334.3 402 49.5
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.9e-88 331.3 423 48.0
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 2.6e-82 310.8 730 42.6
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 2.9e-81 307.4 757 38.8
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.2e-79 302.0 511 47.6
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 4.6e-79 300.1 544 40.1
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 8.9e-75 285.8 444 44.4
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 5.1e-70 270.0 549 42.4
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 2.8e-68 264.2 779 34.1
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 4.0e-59 233.8 591 34.2
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 7.6e-58 229.6 482 38.8
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 7.1e-56 223.0 266 54.1
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 5.1e-54 216.9 389 39.3
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 4.0e-51 207.2 530 30.8
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 1.1e-43 182.6 306 43.1
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 2.5e-40 171.4 584 27.6
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 2.3e-38 164.9 537 31.3
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 1.7e-33 148.7 176 48.9
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.8e-30 138.7 148 56.8
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 9.7e-29 132.9 557 27.3
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.3e-20 105.9 302 31.5
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 1.3e-17 95.9 103 53.4
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 1.4e-16 92.4 80 60.0
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 1.9e-16 92.0 80 60.0
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 9.4e-16 89.7 80 57.5
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.8e-14 85.5 177 40.1
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 1.8e-14 85.5 70 64.3
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.9e-14 84.3 133 40.6
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.7e-13 80.5 97 53.6
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.1e-11 74.3 57 73.7
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 3.6e-07 61.2 103 40.8


User provided reference genes

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