Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.3e-112 409.8 215 100.0
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 5.3e-111 404.4 215 98.6
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 2.0e-110 402.5 215 98.6
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 2.0e-110 402.5 215 98.6
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 1.2e-94 350.1 216 88.4
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 7.0e-79 297.7 215 76.7
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 1.3e-72 276.9 216 71.8
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 1.9e-68 263.1 181 79.6
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 2.7e-67 259.2 207 69.6
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 3.6e-67 258.8 140 99.3
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 6.1e-67 258.1 217 68.7
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 7.0e-63 244.6 208 67.8
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 1.6e-62 243.4 208 68.8
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 2.1e-59 233.0 212 64.2
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 3.6e-59 232.3 216 63.0
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 1.0e-58 230.7 217 64.5
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 1.8e-58 229.9 183 69.9
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 3.4e-57 225.7 217 64.5
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 9.8e-57 224.2 247 57.1
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 4.9e-56 221.9 221 61.5
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 2.4e-55 219.5 199 65.8
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 7.0e-55 218.0 201 65.7
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 2.0e-54 216.5 201 65.2
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 7.8e-54 214.5 216 59.7
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 3.9e-53 212.2 202 62.4
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 1.9e-52 209.9 204 58.8
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 1.9e-52 209.9 198 64.6
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 5.6e-52 208.4 209 61.2
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 7.3e-52 208.0 199 63.8
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 1.2e-51 207.2 213 59.2
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 8.0e-51 204.5 208 59.1
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 1.8e-50 203.4 222 55.0
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 3.1e-50 202.6 149 77.2
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.1e-50 202.6 167 70.7
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 3.1e-50 202.6 184 65.2
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 4.0e-50 202.2 174 66.1
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 5.2e-50 201.8 219 58.9
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 1.2e-49 200.7 217 54.8
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 2.6e-49 199.5 208 57.7
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 3.4e-49 199.1 217 53.9
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 7.5e-49 198.0 210 55.7
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 9.8e-49 197.6 167 70.7
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 2.2e-48 196.4 151 71.5
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 3.7e-48 195.7 167 68.9
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 3.7e-48 195.7 141 73.8
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 4.9e-48 195.3 208 56.2
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 6.4e-48 194.9 186 60.8
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 8.3e-48 194.5 207 60.9
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 1.1e-47 194.1 220 55.0
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.4e-47 193.7 167 67.7
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 9.2e-47 191.0 167 67.1
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 9.2e-47 191.0 181 63.0
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 1.2e-46 190.7 206 59.2
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 1.6e-46 190.3 206 59.2
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 3.5e-46 189.1 211 56.4
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 4.6e-46 188.7 200 53.0
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 1.7e-45 186.8 206 59.2
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 2.3e-45 186.4 209 57.4
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 5.0e-45 185.3 195 59.5
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 1.5e-44 183.7 140 70.0
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.9e-44 183.3 145 72.4
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.9e-44 183.3 145 72.4
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 1.9e-44 183.3 142 69.0
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 4.3e-44 182.2 139 73.4
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 5.6e-44 181.8 165 64.2
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 5.6e-44 181.8 151 68.2
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 7.3e-44 181.4 238 53.8
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 1.2e-43 180.6 128 75.8
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 1.2e-43 180.6 147 66.7
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 1.6e-43 180.3 127 75.6
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 1.6e-43 180.3 109 82.6
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 1.6e-43 180.3 109 82.6
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 1.6e-43 180.3 109 82.6
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 1.6e-43 180.3 109 82.6
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 3.6e-43 179.1 115 80.0
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.6e-43 179.1 116 80.2
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 3.6e-43 179.1 117 78.6
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 8.1e-43 177.9 105 86.7
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 1.1e-42 177.6 134 72.4
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 1.1e-42 177.6 130 74.6
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 1.1e-42 177.6 136 72.1
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.8e-42 176.8 132 70.5
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 3.1e-42 176.0 125 74.4
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 4.0e-42 175.6 105 83.8
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 4.0e-42 175.6 105 83.8
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 6.8e-42 174.9 105 82.9
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 6.8e-42 174.9 105 81.9
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 1.5e-41 173.7 104 85.6
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 1.5e-41 173.7 105 82.9
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 2.0e-41 173.3 137 67.9
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 2.0e-41 173.3 171 58.5
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 5.8e-41 171.8 199 57.3
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 1.7e-40 170.2 138 67.4
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 3.7e-40 169.1 110 76.4
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 6.4e-40 168.3 128 69.5
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 1.4e-39 167.2 164 59.1
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 1.4e-39 167.2 122 71.3
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 4.1e-39 165.6 164 58.5
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 3.5e-38 162.5 134 65.7
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 1.7e-37 160.2 206 52.4
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 1.4e-34 150.6 131 58.8
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 1.4e-34 150.6 131 58.8
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 4.0e-34 149.1 140 57.9
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 6.8e-34 148.3 119 63.9
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 2.9e-32 142.9 101 69.3
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.9e-31 140.2 86 86.0
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 2.1e-30 136.7 105 61.9
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 4.6e-30 135.6 86 84.9
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 5.6e-28 128.6 115 56.5
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 7.3e-28 128.3 76 82.9
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 7.3e-28 128.3 76 82.9
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 1.1e-23 114.4 184 41.8
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 7.3e-20 101.7 112 55.4
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 1.2e-17 94.4 116 44.8
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 9.9e-17 91.3 102 48.0


User provided reference genes

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