Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1296 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.1e-74 282.3 146 100.0
FAN13G3280 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.6e-56 221.1 168 74.4
FvH4_5g37240 Fragaria vesca HOM05D000097 ORTHO05D009232 3.7e-47 191.8 145 75.2
RcHm_v2.0_Chr7g0238781 Rosa chinensis HOM05D000097 ORTHO05D000041 2.2e-39 166.0 167 58.7
FvH4_5g37182 Fragaria vesca HOM05D000097 ORTHO05D000041 1.7e-36 156.4 131 68.7
RcHm_v2.0_Chr7g0238811 Rosa chinensis HOM05D000097 ORTHO05D000041 1.8e-30 136.3 170 49.4
FAN08G2916 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.7e-20 103.2 170 42.4
RcHm_v2.0_Chr7g0242551 Rosa chinensis HOM05D000097 ORTHO05D000041 2.5e-19 99.4 160 38.1
FvH4_5g36340 Fragaria vesca HOM05D000097 ORTHO05D000041 3.2e-19 99.0 171 40.4
RcHm_v2.0_Chr5g0075981 Rosa chinensis HOM05D000097 ORTHO05D000041 1.2e-18 97.1 160 40.0
RcHm_v2.0_Chr7g0243111 Rosa chinensis HOM05D000097 ORTHO05D000041 2.7e-18 95.9 160 40.0
RcHm_v2.0_Chr7g0230661 Rosa chinensis HOM05D000097 ORTHO05D000041 4.7e-18 95.1 164 38.4
RcHm_v2.0_Chr7g0242981 Rosa chinensis HOM05D000097 ORTHO05D000041 1.4e-17 93.6 162 40.1
RcHm_v2.0_Chr6g0276101 Rosa chinensis HOM05D000097 ORTHO05D000041 2.6e-16 89.4 162 34.6
FAN08G2061 Fragaria x ananassa HOM05D000097 ORTHO05D009232 4.4e-16 88.6 177 35.6
RcHm_v2.0_Chr7g0242451 Rosa chinensis HOM05D000097 ORTHO05D000041 1.3e-15 87.0 169 35.5
FAN08G2145 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.8e-15 85.1 167 36.5
MD17G1077100 Malus domestica HOM05D000097 ORTHO05D000041 8.2e-15 84.3 150 38.0
MD09G1088100 Malus domestica HOM05D000097 ORTHO05D000041 2.4e-14 82.8 150 36.0
RcHm_v2.0_Chr7g0214631 Rosa chinensis HOM05D000097 ORTHO05D000041 2.4e-14 82.8 154 39.0
FvH4_5g35840 Fragaria vesca HOM05D000097 ORTHO05D000041 5.3e-14 81.6 172 35.5
FAN18G1661 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.3e-14 81.6 172 35.5
MD17G1078100 Malus domestica HOM05D000097 ORTHO05D000041 5.3e-14 81.6 150 37.3
FAN18G4446 Fragaria x ananassa HOM05D000097 ORTHO05D000041 7.0e-14 81.3 156 35.3
MD17G1077800 Malus domestica HOM05D000097 ORTHO05D000041 7.0e-14 81.3 150 37.3
FAN28G0864 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.5e-13 78.6 156 32.1
Prupe.3G237500 Prunus persica HOM05D000097 ORTHO05D000041 4.5e-13 78.6 167 33.5
FvH4_5g37090 Fragaria vesca HOM05D000097 ORTHO05D009232 5.9e-13 78.2 160 33.8
Prupe.4G282500 Prunus persica HOM05D000097 ORTHO05D000041 7.7e-13 77.8 172 33.7
FvH4_1g02950 Fragaria vesca HOM05D000097 ORTHO05D000041 1.7e-12 76.6 156 31.4
MD09G1088000 Malus domestica HOM05D000097 ORTHO05D000041 2.2e-12 76.3 150 34.7
RcHm_v2.0_Chr1g0338991 Rosa chinensis HOM05D000097 ORTHO05D000041 2.2e-12 76.3 163 34.4
RcHm_v2.0_Chr7g0214581 Rosa chinensis HOM05D000097 ORTHO05D000041 3.8e-12 75.5 156 36.5
FAN04G3137 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.5e-11 73.6 158 32.3
FAN04G1606 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.5e-11 72.8 165 31.5
FAN04G2402 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.5e-11 72.8 133 34.6
Prupe.3G237300 Prunus persica HOM05D000097 ORTHO05D000041 2.5e-11 72.8 168 34.5
FAN18G2981 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.5e-11 71.6 138 32.6
FAN18G4262 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.5e-11 71.6 138 32.6
Prupe.3G236600 Prunus persica HOM05D000097 ORTHO05D000041 5.5e-11 71.6 166 33.7
MD09G1089000 Malus domestica HOM05D000097 ORTHO05D000041 7.2e-11 71.2 153 33.3
MD17G1121900 Malus domestica HOM05D000097 ORTHO05D000041 7.2e-11 71.2 148 34.5
FvH4_1g26570 Fragaria vesca HOM05D000097 ORTHO05D000041 2.1e-10 69.7 152 32.9
FAN19G2096 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.1e-10 69.7 152 32.9
Prupe.3G235600 Prunus persica HOM05D000097 ORTHO05D000041 2.1e-10 69.7 151 33.1
RcHm_v2.0_Chr7g0214721 Rosa chinensis HOM05D000097 ORTHO05D000041 2.1e-10 69.7 76 52.6
MD17G1121300 Malus domestica HOM05D000097 ORTHO05D000041 3.6e-10 68.9 148 33.8
Prupe.3G236300 Prunus persica HOM05D000097 ORTHO05D000041 4.7e-10 68.6 149 31.5
FAN13G1601 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.0e-09 65.9 156 29.5
CiPaw.07G088800 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.0e-09 65.5 145 31.0
Dinv11318 Davidia involucrata HOM05D000097 ORTHO05D000041 8.8e-09 64.3 145 31.7
Atru.chr4.820 Acer truncatum HOM05D000097 ORTHO05D000041 1.5e-08 63.5 168 29.8
Prupe.3G237100 Prunus persica HOM05D000097 ORTHO05D000041 1.5e-08 63.5 137 35.8
MD09G1089300 Malus domestica HOM05D000097 ORTHO05D000041 2.0e-08 63.2 156 33.3
RcHm_v2.0_Chr7g0243251 Rosa chinensis HOM05D000097 ORTHO05D000041 2.0e-08 63.2 116 36.2
Gohir.A03G101400 Gossypium hirsutum HOM05D000097 ORTHO05D000041 2.6e-08 62.8 149 32.9
Potri.007G110000 Populus trichocarpa HOM05D000097 ORTHO05D000041 2.6e-08 62.8 148 29.7
FAN13G2287 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.3e-08 62.4 173 26.6
Cc07_g17920 Coffea canephora HOM05D000097 ORTHO05D000041 4.4e-08 62.0 171 31.0
Oeu044111.2 Olea europaea HOM05D000097 ORTHO05D000041 4.4e-08 62.0 168 29.8
RcHm_v2.0_Chr2g0161841 Rosa chinensis HOM05D000097 ORTHO05D000041 4.4e-08 62.0 166 30.1
CiPaw.14G046000 Carya illinoinensis HOM05D000097 ORTHO05D000041 7.5e-08 61.2 143 29.4
Oeu044115.1 Olea europaea HOM05D000097 ORTHO05D000041 7.5e-08 61.2 168 29.8
Prupe.2G082900 Prunus persica HOM05D000097 ORTHO05D000041 7.5e-08 61.2 153 28.8
Thecc.01G125800 Theobroma cacao HOM05D000097 ORTHO05D000041 7.5e-08 61.2 164 30.5
FAN02G3279 Fragaria x ananassa HOM05D000097 ORTHO05D000041 9.7e-08 60.8 146 29.5
MD09G1086500 Malus domestica HOM05D000097 ORTHO05D000041 9.7e-08 60.8 79 41.8
MD17G1101100 Malus domestica HOM05D000097 ORTHO05D000041 9.7e-08 60.8 168 32.1
RcHm_v2.0_Chr1g0342721 Rosa chinensis HOM05D000097 ORTHO05D000041 1.3e-07 60.5 168 27.4
RcHm_v2.0_Chr2g0161791 Rosa chinensis HOM05D000097 ORTHO05D000041 1.3e-07 60.5 155 29.0
CiPaw.14G045800 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.7e-07 60.1 141 29.8
MD17G1122700 Malus domestica HOM05D000097 ORTHO05D000041 1.7e-07 60.1 162 29.0
Oeu044120.1 Olea europaea HOM05D000097 ORTHO05D000041 1.7e-07 60.1 148 30.4
GSVIVG01011198001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.7e-07 60.1 146 30.1
Cc07_g17970 Coffea canephora HOM05D000097 ORTHO05D000041 2.2e-07 59.7 171 31.0
FvH4_5g19270 Fragaria vesca HOM05D000097 ORTHO05D000041 2.2e-07 59.7 164 32.3
FvH4_6g44571 Fragaria vesca HOM05D000097 ORTHO05D000041 2.8e-07 59.3 93 39.8
FvH4_6g44610 Fragaria vesca HOM05D000097 ORTHO05D000041 2.8e-07 59.3 93 39.8
FAN14G1826 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.8e-07 59.3 93 39.8
MD17G1104500 Malus domestica HOM05D000097 ORTHO05D000041 2.8e-07 59.3 79 43.0
Manes.06G014400 Manihot esculenta HOM05D000097 ORTHO05D000041 2.8e-07 59.3 165 30.3
TWI75G0598 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 2.8e-07 59.3 148 29.7
FvH4_5g37260 Fragaria vesca HOM05D000097 ORTHO05D000041 3.7e-07 58.9 53 62.3
FAN02G2616 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.7e-07 58.9 92 38.0
Gohir.D02G126200 Gossypium hirsutum HOM05D000097 ORTHO05D000041 3.7e-07 58.9 149 31.5
Gohir.D11G232880 Gossypium hirsutum HOM05D000097 ORTHO05D000041 3.7e-07 58.9 165 26.1
Gorai.003G065900 Gossypium raimondii HOM05D000097 ORTHO05D000041 3.7e-07 58.9 165 26.1
QL04p047161 Quercus lobata HOM05D000097 ORTHO05D000041 3.7e-07 58.9 145 31.7
Migut.L00873 Erythranthe guttata HOM05D000097 ORTHO05D000041 4.8e-07 58.5 169 29.6
Gorai.005G141800 Gossypium raimondii HOM05D000097 ORTHO05D000041 4.8e-07 58.5 149 31.5
Thecc.01G126000 Theobroma cacao HOM05D000097 ORTHO05D000041 4.8e-07 58.5 167 26.3
Haze_26477 Corylus avellana HOM05D000097 ORTHO05D000041 6.3e-07 58.2 147 29.9
FAN09G3828 Fragaria x ananassa HOM05D000442 ORTHO05D001979 6.3e-07 58.2 170 27.6
MD09G1088200 Malus domestica HOM05D000097 ORTHO05D000041 6.3e-07 58.2 92 38.0
MD09G1133800 Malus domestica HOM05D000097 ORTHO05D000041 6.3e-07 58.2 163 28.8
Sabra05G0049900 Salix brachista HOM05D000097 ORTHO05D000041 6.3e-07 58.2 162 27.8
CiPaw.12G014700 Carya illinoinensis HOM05D000097 ORTHO05D009232 8.2e-07 57.8 144 27.8
CiPaw.14G042100 Carya illinoinensis HOM05D000097 ORTHO05D000041 8.2e-07 57.8 160 29.4
CiPaw.14G042300 Carya illinoinensis HOM05D000097 ORTHO05D000041 8.2e-07 57.8 149 26.2
Haze_26476 Corylus avellana HOM05D000097 ORTHO05D000041 8.2e-07 57.8 147 29.9
Dinv11314 Davidia involucrata HOM05D000097 ORTHO05D000041 1.1e-06 57.4 168 30.4
Duzib187G1298 Durio zibethinus HOM05D000097 ORTHO05D000041 1.1e-06 57.4 150 31.3
MD03G1133900 Malus domestica HOM05D000097 ORTHO05D000041 1.1e-06 57.4 92 38.0
MD09G1087000 Malus domestica HOM05D000097 ORTHO05D000041 1.1e-06 57.4 75 42.7
Oeu044119.4 Olea europaea HOM05D000097 ORTHO05D000041 1.1e-06 57.4 148 30.4
QL02p065438 Quercus lobata HOM05D000097 ORTHO05D000041 1.1e-06 57.4 145 31.0
Haze_02548 Corylus avellana HOM05D000097 ORTHO05D000041 1.4e-06 57.0 163 28.8
Dinv24323 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-06 57.0 165 28.5
FAN14G0264 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.4e-06 57.0 87 40.2
Oeu056859.1 Olea europaea HOM05D000097 ORTHO05D000041 1.4e-06 57.0 163 28.2
RcHm_v2.0_Chr7g0234601 Rosa chinensis HOM05D000097 ORTHO05D000041 1.4e-06 57.0 119 29.4
Aqoxy4G00796 Aquilegia oxysepala HOM05D000097 ORTHO05D000041 1.8e-06 56.6 154 27.3
Dinv11316 Davidia involucrata HOM05D000097 ORTHO05D000041 2.4e-06 56.2 168 28.6
Duzib147G0358 Durio zibethinus HOM05D000097 ORTHO05D000041 2.4e-06 56.2 149 28.9
FAN08G0420 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.4e-06 56.2 129 29.5
HanXRQChr11g0343361 Helianthus annuus HOM05D000097 ORTHO05D000041 2.4e-06 56.2 160 29.4
MD16G1219400 Malus domestica HOM05D000097 ORTHO05D000041 2.4e-06 56.2 79 40.5
vmacro09243 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.4e-06 56.2 121 31.4
GSVIVG01011204001 Vitis vinifera HOM05D000097 ORTHO05D000041 2.4e-06 56.2 149 27.5
arahy.Tifrunner.gnm1.ann1.D1CLLQ Arachis hypogaea HOM05D000097 ORTHO05D000041 3.1e-06 55.8 78 39.7
CiPaw.01G096400 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.1e-06 55.8 150 31.3
FAN18G2502 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.1e-06 55.8 114 30.7
MD17G1075400 Malus domestica HOM05D000097 ORTHO05D000041 3.1e-06 55.8 95 37.9
MD17G1101400 Malus domestica HOM05D000097 ORTHO05D000041 3.1e-06 55.8 152 27.0
Manes.12G152700 Manihot esculenta HOM05D000097 ORTHO05D000041 3.1e-06 55.8 162 27.8
Potri.005G057900 Populus trichocarpa HOM05D000097 ORTHO05D000041 3.1e-06 55.8 162 27.8
Prupe.2G082700 Prunus persica HOM05D000097 ORTHO05D000041 3.1e-06 55.8 149 27.5
RcHm_v2.0_Chr2g0146761 Rosa chinensis HOM05D000097 ORTHO05D000041 3.1e-06 55.8 170 30.0
Atru.chr4.789_Atru.chr4.794 Acer truncatum HOM05D000097 ORTHO05D000041 4.1e-06 55.5 148 29.1
Dinv25825 Davidia involucrata HOM05D000097 ORTHO05D000041 4.1e-06 55.5 153 28.1
FAN16G2136 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.1e-06 55.5 146 30.1
Oeu044129.1 Olea europaea HOM05D000097 ORTHO05D000041 4.1e-06 55.5 169 27.8
arahy.Tifrunner.gnm1.ann1.3N3K6D Arachis hypogaea HOM05D000097 ORTHO05D000041 5.3e-06 55.1 78 39.7
arahy.Tifrunner.gnm1.ann1.JTXJ2V Arachis hypogaea HOM05D000097 ORTHO05D000041 5.3e-06 55.1 78 39.7
CiPaw.14G041600 Carya illinoinensis HOM05D000097 ORTHO05D000041 5.3e-06 55.1 141 27.7
COL.COLO4_14009 Corchorus olitorius HOM05D000097 ORTHO05D000041 5.3e-06 55.1 167 26.3
Dinv25331 Davidia involucrata HOM05D000097 ORTHO05D000041 5.3e-06 55.1 152 27.6
Manes.06G014601 Manihot esculenta HOM05D000097 ORTHO05D000041 5.3e-06 55.1 165 26.7
THA.LOC104799718 Tarenaya hassleriana HOM05D000097 ORTHO05D000041 5.3e-06 55.1 145 26.9
GSVIVG01011201001 Vitis vinifera HOM05D000097 ORTHO05D000041 5.3e-06 55.1 149 28.9
arahy.Tifrunner.gnm1.ann1.26G3DU Arachis hypogaea HOM05D000097 ORTHO05D000041 7.0e-06 54.7 78 39.7
Dinv41110 Davidia involucrata HOM05D000097 ORTHO05D000041 7.0e-06 54.7 160 29.4
FAN04G2452 Fragaria x ananassa HOM05D000097 ORTHO05D000041 7.0e-06 54.7 53 60.4
Rhsim10G0137400 Rhododendron simsii HOM05D000097 ORTHO05D000041 7.0e-06 54.7 165 26.1
arahy.Tifrunner.gnm1.ann1.EWC702 Arachis hypogaea HOM05D000097 ORTHO05D000041 9.1e-06 54.3 71 40.8
arahy.Tifrunner.gnm1.ann1.UY05SB Arachis hypogaea HOM05D000097 ORTHO05D000041 9.1e-06 54.3 71 40.8
Cpa.g.sc42.114 Carica papaya HOM05D000097 ORTHO05D000041 9.1e-06 54.3 145 30.3
CiPaw.01G097000 Carya illinoinensis HOM05D000097 ORTHO05D000041 9.1e-06 54.3 154 30.5
CiPaw.01G104800 Carya illinoinensis HOM05D000097 ORTHO05D000041 9.1e-06 54.3 142 33.1
Ciclev10025204m.g Citrus clementina HOM05D000097 ORTHO05D000041 9.1e-06 54.3 148 28.4
Haze_07767 Corylus avellana HOM05D000596 ORTHO05D001497 9.1e-06 54.3 147 30.6
FAN05G2435 Fragaria x ananassa HOM05D000442 ORTHO05D001979 9.1e-06 54.3 167 26.9
HanXRQChr11g0343281 Helianthus annuus HOM05D000097 ORTHO05D000041 9.1e-06 54.3 165 29.7
Prupe.2G033900 Prunus persica HOM05D000097 ORTHO05D000041 9.1e-06 54.3 163 30.7
Thecc.01G125700 Theobroma cacao HOM05D000097 ORTHO05D000041 9.1e-06 54.3 79 41.8
vmacro18662 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 9.1e-06 54.3 165 26.1


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