Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 0.0e+00 2175.2 1127 100.0
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 0.0e+00 2091.6 1129 93.6
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 0.0e+00 2090.1 1129 93.7
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 0.0e+00 2045.4 1207 87.3
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 0.0e+00 2004.6 1176 88.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 0.0e+00 1766.1 1130 81.6
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 0.0e+00 1739.9 963 90.9
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 0.0e+00 1496.1 1151 70.0
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 0.0e+00 1412.5 1158 67.7
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 0.0e+00 1402.9 1147 66.9
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 0.0e+00 1106.7 1177 55.2
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 0.0e+00 1100.1 1194 55.3
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 0.0e+00 1083.2 1199 54.2
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 3.4e-310 1068.5 1159 54.6
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 2.0e-302 1042.7 1129 54.2
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.0e-290 1003.8 1132 51.9
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 4.5e-286 988.4 1151 52.6
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.0e-282 977.2 1153 51.3
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 1.4e-282 976.9 1142 51.9
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.0e-278 963.0 1138 51.3
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.9e-277 959.1 1124 52.2
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.6e-275 953.4 1109 51.2
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.7e-272 942.2 1166 49.4
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 4.8e-272 941.8 1134 52.6
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 3.1e-271 939.1 1202 48.5
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 8.5e-269 931.0 1147 49.7
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.5e-268 929.5 1122 50.5
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 2.8e-264 916.0 1199 48.2
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 3.1e-263 912.5 1163 47.6
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 5.3e-263 911.8 1191 47.7
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.0e-261 907.5 1181 48.6
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 1.1e-260 904.0 1122 49.5
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.5e-260 903.7 1187 48.1
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 2.5e-260 902.9 1164 49.1
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 5.5e-260 901.7 1132 48.4
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.1e-259 899.8 1132 47.8
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.2e-257 894.0 1132 47.0
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 2.6e-257 892.9 1145 47.3
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 2.2e-256 889.8 906 55.0
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 7.0e-255 884.8 1126 49.5
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.9e-253 879.4 1122 48.8
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 8.0e-251 871.3 1129 47.6
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 8.0e-251 871.3 1147 47.9
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.1e-247 860.9 1094 48.3
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 5.4e-247 858.6 1134 47.3
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 2.9e-245 852.8 1160 45.7
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 2.1e-243 846.7 1131 47.7
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 2.3e-242 843.2 1111 47.4
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 8.9e-242 841.3 1180 45.3
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 4.4e-241 839.0 1120 47.6
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 9.8e-241 837.8 1257 44.5
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 3.7e-240 835.9 1162 46.8
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 3.3e-236 822.8 1187 44.1
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 4.3e-236 822.4 1142 45.2
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 2.1e-235 820.1 1187 44.1
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.1e-235 820.1 559 72.3
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 2.3e-229 800.0 1179 44.1
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 1.2e-227 794.3 1167 44.0
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.1e-227 793.5 1141 43.6
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 5.8e-225 785.4 1158 44.5
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 7.5e-225 785.0 554 69.7
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 8.3e-224 781.6 1175 44.6
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.4e-223 780.8 1125 45.2
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 5.4e-223 778.9 1126 44.7
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.2e-222 777.7 1139 44.6
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.2e-222 777.7 1138 44.8
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 1.0e-221 774.6 1123 43.1
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.3e-221 774.2 1112 43.5
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.1e-220 771.2 1182 43.4
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.6e-219 767.3 1154 43.3
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 2.1e-219 766.9 1121 43.4
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.8e-219 766.5 1127 44.2
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.8e-218 763.8 1036 46.6
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 2.4e-218 763.5 1146 44.2
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 2.0e-217 760.4 1126 43.3
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.2e-214 751.1 1140 42.3
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.6e-214 750.7 1151 43.0
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.3e-213 746.9 1136 42.6
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 8.7e-213 745.0 1132 41.9
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 3.3e-212 743.0 1113 45.2
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 3.3e-212 743.0 911 48.4
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.1e-207 728.0 923 46.5
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.1e-207 728.0 1037 45.2
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 3.2e-207 726.5 1116 42.0
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 3.2e-207 726.5 1117 42.0
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 4.6e-206 722.6 915 46.7
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.3e-205 720.3 1037 45.0
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.1e-203 713.8 1132 40.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 8.1e-203 711.8 1100 43.4
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 3.1e-202 709.9 717 55.9
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.6e-201 706.8 1173 41.2
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 3.4e-201 706.4 592 60.3
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 8.7e-197 691.8 1206 40.1
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.3e-195 688.0 968 44.4
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 2.3e-189 667.2 1157 39.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 9.6e-188 661.8 1151 40.7
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 2.8e-179 633.6 910 42.5
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.2e-177 628.2 1067 40.1
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 8.5e-176 622.1 580 54.5
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.0e-173 615.1 1088 39.4
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 6.5e-168 595.9 939 42.6
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.8e-149 532.7 503 57.3
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 3.1e-146 523.9 1158 35.8
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 3.3e-135 487.3 414 59.2
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 4.0e-133 480.3 891 39.3
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.3e-131 472.6 930 39.1
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 1.6e-129 468.4 316 71.8
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.7e-128 464.9 739 38.3
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 9.8e-124 449.1 550 45.6
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.2e-123 448.0 611 43.0
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 7.3e-119 433.0 518 43.4
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.7e-118 430.3 781 37.6
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 3.7e-115 420.6 513 45.8
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.7e-105 387.9 795 38.9
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 2.1e-81 308.5 724 35.6
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 6.2e-78 297.0 228 68.9
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 2.7e-73 281.6 757 32.5
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.8e-69 268.9 222 61.3
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.0e-69 266.5 163 86.5
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.0e-35 156.8 272 36.8
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.5e-26 126.3 631 28.8
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 8.8e-24 117.1 411 33.6
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 3.7e-22 111.7 80 71.2
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 7.3e-18 97.4 196 32.1
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.6e-15 89.0 173 38.7
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 2.9e-14 85.5 57 64.9
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.9e-14 85.5 101 44.6
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.7e-14 85.1 113 46.0
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 8.3e-14 84.0 74 54.1
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 1.1e-13 83.6 68 58.8
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 1.8e-13 82.8 51 70.6
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.6e-12 79.7 78 48.7
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.0e-12 79.3 151 42.4


User provided reference genes

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