Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.4e-188 662.1 368 100.0
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 6.2e-136 488.0 374 81.6
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.4e-135 486.9 374 81.6
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.4e-132 476.1 372 79.0
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 4.6e-123 445.3 374 75.4
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 4.7e-107 392.1 378 69.0
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 3.3e-76 289.7 370 51.9
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 3.6e-75 286.2 369 51.8
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 1.4e-47 194.5 380 37.4
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 2.1e-46 190.7 375 40.5
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 2.3e-45 187.2 373 38.1
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 5.6e-44 182.6 368 37.5
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 3.6e-43 179.9 373 37.3
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 6.8e-42 175.6 371 36.7
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 8.9e-42 175.3 377 37.1
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 9.9e-41 171.8 384 37.2
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 2.2e-40 170.6 386 35.2
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 2.2e-40 170.6 382 37.2
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 2.9e-40 170.2 384 35.4
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 4.9e-40 169.5 378 35.7
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 6.4e-40 169.1 386 34.7
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 6.4e-40 169.1 386 34.7
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 2.4e-39 167.2 379 36.1
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 1.3e-37 161.4 384 35.7
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 4.3e-36 156.4 385 35.1
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 5.6e-36 156.0 371 34.0
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 9.6e-36 155.2 375 32.5
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 1.6e-35 154.5 366 34.4
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 3.6e-35 153.3 381 33.6
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 3.6e-35 153.3 370 34.1
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 6.2e-35 152.5 363 32.8
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 2.4e-34 150.6 371 34.0
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 3.1e-34 150.2 374 32.4
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 9.0e-34 148.7 377 33.7
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 9.0e-34 148.7 377 33.7
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 9.0e-34 148.7 377 33.7
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 4.4e-33 146.4 365 32.6
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 9.9e-33 145.2 379 34.0
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 1.3e-32 144.8 371 32.9
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 2.9e-32 143.7 378 33.9
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 1.9e-31 141.0 372 32.8
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 4.2e-31 139.8 391 36.8
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 1.7e-29 134.4 365 32.6
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 3.9e-29 133.3 380 33.2
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 3.9e-29 133.3 376 33.2
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 6.6e-29 132.5 377 32.1
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 8.7e-29 132.1 364 33.2
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 1.9e-28 131.0 369 28.2
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 1.3e-27 128.3 382 31.9
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 2.1e-27 127.5 303 33.3
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 1.4e-26 124.8 351 30.2
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 1.8e-26 124.4 310 34.5
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 3.8e-24 116.7 336 32.7
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 1.9e-23 114.4 380 31.1
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 4.6e-22 109.8 157 43.9
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.8e-21 107.8 268 34.3
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 4.8e-19 99.8 280 30.0
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 5.3e-18 96.3 312 32.1
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 9.9e-17 92.0 156 37.2
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 2.3e-13 80.9 215 33.5
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 2.9e-08 63.9 191 31.9
Actinidia18297 Actinidia chinensis HOM05D002266 ORTHO05D010337 2.5e-07 60.8 42 69.0
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 7.9e-06 55.8 38 73.7


User provided reference genes

Program Settings