Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.1e-84 316.6 158 100.0
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.2e-75 286.6 156 92.9
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 3.2e-65 251.9 150 86.7
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.4e-52 209.1 109 96.3
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 6.1e-48 194.5 155 69.7
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 2.0e-43 179.5 156 66.7
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 2.1e-40 169.5 157 61.1
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 2.8e-32 142.5 132 62.1
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 3.6e-32 142.1 156 55.8
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 8.0e-32 141.0 154 56.5
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 1.0e-31 140.6 159 55.3
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 5.2e-31 138.3 151 54.3
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 7.5e-30 134.4 151 55.0
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.7e-29 133.3 151 52.3
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 7.0e-28 127.9 122 56.6
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 1.0e-26 124.0 142 49.3
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 2.3e-26 122.9 156 48.1
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 5.0e-26 121.7 92 65.2
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 5.0e-26 121.7 159 52.2
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 8.6e-26 120.9 130 53.8
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 8.6e-26 120.9 136 50.7
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 5.6e-25 118.2 92 59.8
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 5.6e-25 118.2 95 60.0
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 2.1e-24 116.3 165 44.2
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 3.6e-24 115.5 158 49.4
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.6e-24 115.5 116 50.0
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 8.0e-24 114.4 158 48.7
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.3e-23 112.8 160 43.1
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 3.1e-23 112.5 128 51.6
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 8.9e-23 110.9 152 46.7
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 8.9e-23 110.9 151 46.4
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.5e-22 110.2 130 52.3
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 2.0e-22 109.8 93 57.0
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 2.0e-22 109.8 128 50.8
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 3.4e-22 109.0 96 58.3
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 4.4e-22 108.6 146 47.3
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 5.8e-22 108.2 54 94.4
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 5.8e-22 108.2 119 50.4
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 7.5e-22 107.8 106 54.7
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.3e-21 107.1 145 43.4
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 1.3e-21 107.1 152 46.7
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 2.9e-21 105.9 91 59.3
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 3.2e-20 102.4 147 43.5
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 2.0e-19 99.8 155 42.6
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 3.5e-19 99.0 122 46.7
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 4.6e-19 98.6 147 42.2
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 7.8e-19 97.8 147 41.5
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 1.7e-18 96.7 152 44.7
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 9.5e-17 90.9 152 42.1
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 9.5e-17 90.9 116 43.1
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 3.6e-16 89.0 127 43.3
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 4.7e-16 88.6 150 42.7
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 4.7e-16 88.6 144 41.7
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 3.1e-15 85.9 90 47.8
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 4.0e-15 85.5 147 38.1
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 4.0e-15 85.5 108 43.5
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 8.9e-15 84.3 87 48.3
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 2.6e-14 82.8 76 52.6
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 4.4e-14 82.0 149 40.3
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 5.8e-14 81.6 96 47.9
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 9.8e-14 80.9 86 48.8
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.2e-13 79.7 149 38.3
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 2.9e-13 79.3 156 39.7
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 3.7e-13 79.0 101 42.6
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 3.7e-13 79.0 138 36.2
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 4.9e-13 78.6 93 43.0
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 4.9e-13 78.6 87 50.6
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 4.9e-13 78.6 166 36.7
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 6.4e-13 78.2 142 39.4
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 1.4e-12 77.0 123 37.4
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 2.4e-12 76.3 154 39.6
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 2.4e-12 76.3 141 39.7
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 9.2e-12 74.3 151 37.1
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 1.6e-11 73.6 104 40.4
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 2.1e-11 73.2 145 38.6
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 2.1e-11 73.2 80 47.5
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 2.7e-11 72.8 142 34.5
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 2.7e-11 72.8 88 44.3
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 4.6e-11 72.0 127 36.2
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 1.0e-10 70.9 103 36.9
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.0e-10 70.9 156 34.0
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.3e-10 70.5 76 50.0
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 1.3e-10 70.5 90 43.3
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.3e-10 69.7 74 48.6
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 3.9e-10 68.9 122 35.2
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 8.6e-10 67.8 67 52.2
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 1.9e-09 66.6 146 38.4
CARHR274520 Cardamine hirsuta HOM05D010173 ORTHO05D007801 4.3e-09 65.5 108 35.2
Haze_18546 Corylus avellana HOM05D007643 ORTHO05D007801 5.6e-09 65.1 60 56.7
Zm00001eb101340 Zea mays HOM05D007643 ORTHO05D007801 9.5e-09 64.3 60 48.3
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 1.6e-08 63.5 125 32.8
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 108 38.0
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 108 38.0
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 108 38.0
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 108 38.0
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 108 38.0
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 108 38.0
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 135 33.3
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 2.1e-08 63.2 135 33.3
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 2.1e-08 63.2 135 33.3
Hund02541 Selenicereus undatus HOM05D007643 ORTHO05D007801 4.7e-08 62.0 197 29.4
Ah.02g114340 Amaranthus hybridus HOM05D007643 ORTHO05D007801 6.2e-08 61.6 123 34.1
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 6.2e-08 61.6 84 44.0
Zm00001eb199190 Zea mays HOM05D031404 ORTHO05D007801 1.1e-07 60.8 141 34.0
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 1.8e-07 60.1 108 37.0
TAR374G0331 Trochodendron aralioides HOM05D007643 ORTHO05D007801 1.8e-07 60.1 90 43.3
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 3.1e-07 59.3 96 33.3
Sed0026794 Sechium edule HOM05D007643 ORTHO05D007801 4.0e-07 58.9 104 39.4
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 8.9e-07 57.8 78 37.2
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 4.4e-06 55.5 142 31.0
Sc12g0006930 Simmondsia chinensis HOM05D007643 ORTHO05D007801 5.8e-06 55.1 95 38.9


User provided reference genes

Program Settings