Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 5.9e-95 350.9 183 100.0
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 4.2e-93 344.7 183 97.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 4.2e-93 344.7 183 97.8
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.1e-80 302.0 188 88.3
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 9.5e-77 290.4 189 84.1
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 5.8e-58 228.0 172 71.5
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 1.1e-53 213.8 170 68.2
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 5.4e-40 168.3 133 64.7
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 6.0e-39 164.9 131 65.6
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 1.1e-37 160.6 135 61.5
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 5.6e-37 158.3 171 51.5
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 1.3e-36 157.1 182 54.9
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.6e-36 156.8 151 59.6
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.8e-36 155.2 149 59.7
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 8.1e-36 154.5 113 70.8
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.1e-35 154.1 118 66.9
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 3.1e-35 152.5 178 53.4
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 9.0e-35 151.0 185 52.4
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 2.0e-34 149.8 131 60.3
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 4.5e-34 148.7 141 59.6
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 5.8e-34 148.3 142 57.0
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 2.2e-33 146.4 119 66.4
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 6.4e-33 144.8 118 65.3
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.4e-33 144.8 131 62.6
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 8.4e-33 144.4 125 62.4
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 8.4e-33 144.4 120 63.3
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.9e-32 143.3 108 67.6
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 5.4e-32 141.7 163 50.9
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 7.1e-32 141.4 123 64.2
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 3.5e-31 139.0 137 52.6
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.3e-30 137.1 128 57.0
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 2.3e-30 136.3 160 47.5
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 2.3e-30 136.3 137 52.6
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 2.3e-30 136.3 130 56.2
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 8.7e-30 134.4 137 51.1
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-29 134.0 125 60.8
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-29 134.0 125 60.8
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-29 134.0 125 60.8
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-29 134.0 125 60.8
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 1.5e-29 133.7 137 50.4
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 1.5e-29 133.7 125 53.6
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.9e-29 133.3 125 60.0
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.9e-29 133.3 133 52.6
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 2.5e-29 132.9 124 55.6
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 2.5e-29 132.9 125 53.6
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 2.5e-29 132.9 125 53.6
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 2.5e-29 132.9 125 53.6
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.3e-29 132.1 125 60.0
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 5.6e-29 131.7 137 54.0
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 9.6e-29 131.0 125 52.8
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 1.6e-28 130.2 109 62.4
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 4.8e-28 128.6 136 50.7
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.2e-28 128.3 125 58.4
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 1.1e-27 127.5 114 60.5
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 3.1e-27 125.9 109 59.6
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 2.0e-26 123.2 84 75.0
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 7.6e-26 121.3 177 43.5
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.7e-25 120.2 94 68.1
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 4.9e-25 118.6 130 51.5
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 3.2e-24 115.9 138 47.1
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 3.2e-24 115.9 138 47.1
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 7.1e-24 114.8 159 46.5
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-23 113.2 125 56.0
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.6e-23 112.1 117 59.8
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 2.1e-20 103.2 80 63.8
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.2e-18 97.4 65 75.4
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 5.8e-18 95.1 65 72.3
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 5.5e-16 88.6 56 80.4
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-14 81.3 97 44.3
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 2.2e-09 66.6 104 41.3
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 8.5e-09 64.7 93 41.9
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 9.4e-08 61.2 112 35.7


User provided reference genes

Program Settings